RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FCER1GP30273 86 aa13.59□□□□□ -0.23
PTPN4-202ENST00000420482 XCL1P47992 114 aa13.59□□□□□ -0.23
PTPN4-202ENST00000420482 POLR2KP53803 58 aaKnown RBP13.59□□□□□ -0.23
PTPN4-202ENST00000420482 MRPL52Q86TS9 123 aaKnown RBP13.59□□□□□ -0.23
PTPN4-202ENST00000420482 AMN1Q8IY45 258 aa13.59□□□□□ -0.23
PTPN4-202ENST00000420482 C7orf33Q8WU49 177 aa13.59□□□□□ -0.23
PTPN4-202ENST00000420482 NAT8BQ9UHF3 227 aa13.59□□□□□ -0.23
PTPN4-202ENST00000420482 LINC00959A0A1B0GUT2 108 aa13.58□□□□□ -0.24
PTPN4-202ENST00000420482 VCYO14598 125 aa13.58□□□□□ -0.24
PTPN4-202ENST00000420482 COX6A2Q02221 97 aa13.58□□□□□ -0.24
PTPN4-202ENST00000420482 FOXI1Q12951 378 aa13.58□□□□□ -0.24
PTPN4-202ENST00000420482 V9GYV3 84 aa13.58□□□□□ -0.24
PTPN4-202ENST00000420482 PKHD1L1Q86WI1 4243 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 CCL25O15444 150 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 CHTF8P0CG12 524 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 NUP35Q8NFH5 326 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 ISOC2Q96AB3 205 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 KIR2DL4Q99706 377 aa13.57□□□□□ -0.24
PTPN4-202ENST00000420482 IGHV1-58A0A0C4DH39 117 aa13.56□□□□□ -0.24
PTPN4-202ENST00000420482 PPP1R2P9O14990 202 aa13.56□□□□□ -0.24
PTPN4-202ENST00000420482 GAS8-AS1O95177 125 aa13.56□□□□□ -0.24
PTPN4-202ENST00000420482 LINC00474Q9P2X8 69 aa13.56□□□□□ -0.24
PTPN4-202ENST00000420482 ADIRFQ15847 76 aa13.55□□□□□ -0.24
PTPN4-202ENST00000420482 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
PTPN4-202ENST00000420482 CDC42SE2Q9NRR3 84 aa13.55□□□□□ -0.24
PTPN4-202ENST00000420482 PLAC8Q9NZF1 115 aa13.55□□□□□ -0.24
PTPN4-202ENST00000420482 NAT8Q9UHE5 227 aa13.55□□□□□ -0.24
PTPN4-202ENST00000420482 SUMO2P61956 95 aaKnown RBP13.54□□□□□ -0.24
PTPN4-202ENST00000420482 RPL23P62829 140 aaKnown RBP13.54□□□□□ -0.24
PTPN4-202ENST00000420482 PEA15Q15121 130 aa13.54□□□□□ -0.24
PTPN4-202ENST00000420482 MAJINQ3KP22 176 aa13.54□□□□□ -0.24
PTPN4-202ENST00000420482 CD164L2Q6UWJ8 174 aa13.54□□□□□ -0.24
PTPN4-202ENST00000420482 Q6ZRU5 148 aa13.54□□□□□ -0.24
PTPN4-202ENST00000420482 TMEM18Q96B42 140 aa13.54□□□□□ -0.24
PTPN4-202ENST00000420482 IGKV2-24A0A0C4DH68 120 aa13.53□□□□□ -0.24
PTPN4-202ENST00000420482 A0A1B0GW15 77 aa13.53□□□□□ -0.24
PTPN4-202ENST00000420482 ZNF561-AS1K7EIQ3 104 aa13.53□□□□□ -0.24
PTPN4-202ENST00000420482 SMDT1Q9H4I9 107 aa13.53□□□□□ -0.24
PTPN4-202ENST00000420482 C1orf196B1AJZ1 125 aa13.52□□□□□ -0.25
PTPN4-202ENST00000420482 HNRNPA3P51991 378 aaKnown RBP13.52□□□□□ -0.25
PTPN4-202ENST00000420482 PRSS3P2Q8NHM4 247 aa13.52□□□□□ -0.25
PTPN4-202ENST00000420482 CSDC2Q9Y534 153 aaKnown RBP13.52□□□□□ -0.25
PTPN4-202ENST00000420482 LINC00862A6NCI5 91 aa13.51□□□□□ -0.25
PTPN4-202ENST00000420482 SMKR1H3BMG3 65 aa13.51□□□□□ -0.25
PTPN4-202ENST00000420482 TCAPO15273 167 aa13.51□□□□□ -0.25
PTPN4-202ENST00000420482 CARD19Q96LW7 228 aa13.51□□□□□ -0.25
PTPN4-202ENST00000420482 S100A8P05109 93 aa13.5□□□□□ -0.25
PTPN4-202ENST00000420482 MALP21145 153 aa13.5□□□□□ -0.25
PTPN4-202ENST00000420482 FAM104BQ5XKR9 115 aa13.5□□□□□ -0.25
PTPN4-202ENST00000420482 STPG4Q8N801 248 aa13.5□□□□□ -0.25
PTPN4-202ENST00000420482 SMIM27A0A1W2PRY6 76 aa13.49□□□□□ -0.25
PTPN4-202ENST00000420482 CAMPP49913 170 aa13.49□□□□□ -0.25
PTPN4-202ENST00000420482 NRACQ8N912 160 aa13.49□□□□□ -0.25
PTPN4-202ENST00000420482 PHOX2AO14813 284 aa13.48□□□□□ -0.25
PTPN4-202ENST00000420482 CKS2P33552 79 aa13.48□□□□□ -0.25
PTPN4-202ENST00000420482 MRPL51Q4U2R6 128 aaKnown RBP13.48□□□□□ -0.25
PTPN4-202ENST00000420482 C20orf78Q9BR46 151 aa13.48□□□□□ -0.25
PTPN4-202ENST00000420482 UBR4Q5T4S7 5183 aa13.47□□□□□ -0.25
PTPN4-202ENST00000420482 F8W036 122 aa13.47□□□□□ -0.25
PTPN4-202ENST00000420482 COX7A2LO14548 114 aa13.47□□□□□ -0.25
PTPN4-202ENST00000420482 SYCNQ0VAF6 134 aa13.47□□□□□ -0.25
PTPN4-202ENST00000420482 UBE2D4Q9Y2X8 147 aa13.47□□□□□ -0.25
PTPN4-202ENST00000420482 A0A096LNI7 61 aa13.46□□□□□ -0.25
PTPN4-202ENST00000420482 TRBV24-1A0A075B6N3 115 aa13.45□□□□□ -0.26
PTPN4-202ENST00000420482 TIMM21Q9BVV7 248 aa13.45□□□□□ -0.26
PTPN4-202ENST00000420482 PLA2G2DQ9UNK4 145 aa13.45□□□□□ -0.26
PTPN4-202ENST00000420482 A0A1B0GVG6 124 aa13.44□□□□□ -0.26
PTPN4-202ENST00000420482 APOMO95445 188 aa13.44□□□□□ -0.26
PTPN4-202ENST00000420482 RPL32P62910 135 aaKnown RBP13.44□□□□□ -0.26
PTPN4-202ENST00000420482 LINC00526Q96FQ7 95 aa13.44□□□□□ -0.26
PTPN4-202ENST00000420482 TRAV13-1A0A0B4J241 112 aa13.43□□□□□ -0.26
PTPN4-202ENST00000420482 C9JQL5 133 aa13.43□□□□□ -0.26
PTPN4-202ENST00000420482 HBBP68871 147 aa13.43□□□□□ -0.26
PTPN4-202ENST00000420482 TNFRSF6BO95407 300 aa13.41□□□□□ -0.26
PTPN4-202ENST00000420482 PPBPP02775 128 aa13.41□□□□□ -0.26
PTPN4-202ENST00000420482 SRSF3P84103 164 aaKnown RBP13.41□□□□□ -0.26
PTPN4-202ENST00000420482 IGLV4-69A0A075B6H9 119 aa13.4□□□□□ -0.26
PTPN4-202ENST00000420482 LOC107984640A0A0U1RRK4 108 aa13.4□□□□□ -0.26
PTPN4-202ENST00000420482 RNASE13Q5GAN3 156 aaKnown RBP13.4□□□□□ -0.26
PTPN4-202ENST00000420482 MRPL54Q6P161 138 aaKnown RBP13.4□□□□□ -0.26
PTPN4-202ENST00000420482 CAMK2N2Q96S95 79 aa13.4□□□□□ -0.26
PTPN4-202ENST00000420482 D6R8Y8 96 aa13.39□□□□□ -0.27
PTPN4-202ENST00000420482 PRR3P79522 188 aaKnown RBP13.39□□□□□ -0.27
PTPN4-202ENST00000420482 Q6ZUT4 128 aa13.39□□□□□ -0.27
PTPN4-202ENST00000420482 SMIM2Q9BVW6 85 aa13.39□□□□□ -0.27
PTPN4-202ENST00000420482 SPANXA1Q9NS26 97 aa13.39□□□□□ -0.27
PTPN4-202ENST00000420482 C2orf48Q96LS8 159 aa13.38□□□□□ -0.27
PTPN4-202ENST00000420482 PTTG1IPP53801 180 aa13.37□□□□□ -0.27
PTPN4-202ENST00000420482 ATP5L2Q7Z4Y8 100 aa13.37□□□□□ -0.27
PTPN4-202ENST00000420482 RAB5AP20339 215 aa13.36□□□□□ -0.27
PTPN4-202ENST00000420482 GAGE2BQ13066 116 aa13.36□□□□□ -0.27
PTPN4-202ENST00000420482 C5orf38Q86SI9 138 aa13.36□□□□□ -0.27
PTPN4-202ENST00000420482 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
PTPN4-202ENST00000420482 Q6ZRP5 223 aa13.35□□□□□ -0.27
PTPN4-202ENST00000420482 ORMDL3Q8N138 153 aa13.35□□□□□ -0.27
PTPN4-202ENST00000420482 OR10D4PQ8NGN7 298 aa13.35□□□□□ -0.27
PTPN4-202ENST00000420482 MT1HL1P0DM35 61 aa13.34□□□□□ -0.27
PTPN4-202ENST00000420482 RPL39P62891 51 aaKnown RBP13.34□□□□□ -0.27
PTPN4-202ENST00000420482 MRPS36P82909 103 aaKnown RBP13.34□□□□□ -0.27
PTPN4-202ENST00000420482 SPAG11BQ08648 103 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms