RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 FOXI1Q12951 378 aa8.94□□□□□ -0.98
LINC01006-202ENST00000418309 LYPD6BQ8NI32 183 aa8.94□□□□□ -0.98
LINC01006-202ENST00000418309 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
LINC01006-202ENST00000418309 TMEM242Q9NWH2 141 aa8.94□□□□□ -0.98
LINC01006-202ENST00000418309 PKHD1L1Q86WI1 4243 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
LINC01006-202ENST00000418309 LINC00959A0A1B0GUT2 108 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 HIGD1CA8MV81 97 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 CCL25O15444 150 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 TSHBP01222 138 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 STPG4Q8N801 248 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 TSKUQ8WUA8 353 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 TMEM191AQ9H0A3 160 aa8.93□□□□□ -0.98
LINC01006-202ENST00000418309 ZNF727A8MUV8 499 aa8.92□□□□□ -0.98
LINC01006-202ENST00000418309 ESDP10768 282 aa8.92□□□□□ -0.98
LINC01006-202ENST00000418309 SS18Q15532 418 aa8.92□□□□□ -0.98
LINC01006-202ENST00000418309 LINC01551Q86U37 167 aa8.92□□□□□ -0.98
LINC01006-202ENST00000418309 IGHV1-58A0A0C4DH39 117 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 RAB4AP20338 218 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 AMN1Q8IY45 258 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 LINC00526Q96FQ7 95 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 OSTCQ9NRP0 149 aa8.91□□□□□ -0.98
LINC01006-202ENST00000418309 A0A096LNI7 61 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 FCER1GP30273 86 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 POLR2KP53803 58 aaKnown RBP8.9□□□□□ -0.98
LINC01006-202ENST00000418309 RIGQ13278 110 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 ZNF664Q8N3J9 261 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 CDC42SE2Q9NRR3 84 aa8.9□□□□□ -0.98
LINC01006-202ENST00000418309 C7orf77A4D0Y5 90 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 SMKR1H3BMG3 65 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 ZNF561-AS1K7EIQ3 104 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 LINC00474Q9P2X8 69 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 PKIGQ9Y2B9 76 aa8.89□□□□□ -0.99
LINC01006-202ENST00000418309 TRBV27A0A0K0K1C4 114 aa8.88□□□□□ -0.99
LINC01006-202ENST00000418309 VCYO14598 125 aa8.88□□□□□ -0.99
LINC01006-202ENST00000418309 SRP19P09132 144 aaKnown RBP8.88□□□□□ -0.99
LINC01006-202ENST00000418309 CD164L2Q6UWJ8 174 aa8.88□□□□□ -0.99
LINC01006-202ENST00000418309 MRPL52Q86TS9 123 aaKnown RBP8.88□□□□□ -0.99
LINC01006-202ENST00000418309 PPP1R17O96001 155 aa8.87□□□□□ -0.99
LINC01006-202ENST00000418309 MALP21145 153 aa8.87□□□□□ -0.99
LINC01006-202ENST00000418309 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
LINC01006-202ENST00000418309 NUP35Q8NFH5 326 aa8.87□□□□□ -0.99
LINC01006-202ENST00000418309 V9GYV3 84 aa8.87□□□□□ -0.99
LINC01006-202ENST00000418309 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
LINC01006-202ENST00000418309 SMAGPQ0VAQ4 97 aa8.86□□□□□ -0.99
LINC01006-202ENST00000418309 TMEM241Q24JQ0 296 aa8.86□□□□□ -0.99
LINC01006-202ENST00000418309 KIR2DL4Q99706 377 aa8.86□□□□□ -0.99
LINC01006-202ENST00000418309 C1orf196B1AJZ1 125 aa8.85□□□□□ -0.99
LINC01006-202ENST00000418309 SUMO2P61956 95 aaKnown RBP8.85□□□□□ -0.99
LINC01006-202ENST00000418309 RNASE13Q5GAN3 156 aaKnown RBP8.85□□□□□ -0.99
LINC01006-202ENST00000418309 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
LINC01006-202ENST00000418309 NAT8BQ9UHF3 227 aa8.85□□□□□ -0.99
LINC01006-202ENST00000418309 CAMPP49913 170 aa8.84□□□□□ -0.99
LINC01006-202ENST00000418309 ADIRFQ15847 76 aa8.84□□□□□ -0.99
LINC01006-202ENST00000418309 NRACQ8N912 160 aa8.84□□□□□ -0.99
LINC01006-202ENST00000418309 IGLV4-69A0A075B6H9 119 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 TRAV13-1A0A0B4J241 112 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 COX7A2LO14548 114 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 PPP1R2P9O14990 202 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 RPL23P62829 140 aaKnown RBP8.83□□□□□ -1
LINC01006-202ENST00000418309 GAGE2BQ13066 116 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 MRPL51Q4U2R6 128 aaKnown RBP8.83□□□□□ -1
LINC01006-202ENST00000418309 FAM74A3Q4VXF1 159 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 TMEM18Q96B42 140 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 UBE2D4Q9Y2X8 147 aa8.83□□□□□ -1
LINC01006-202ENST00000418309 CSDC2Q9Y534 153 aaKnown RBP8.83□□□□□ -1
LINC01006-202ENST00000418309 LOC107984640A0A0U1RRK4 108 aa8.82□□□□□ -1
LINC01006-202ENST00000418309 FAM104BQ5XKR9 115 aa8.82□□□□□ -1
LINC01006-202ENST00000418309 CAMK2N2Q96S95 79 aa8.82□□□□□ -1
LINC01006-202ENST00000418309 KRTAP4-8Q9BYQ9 185 aa8.82□□□□□ -1
LINC01006-202ENST00000418309 HMCN2Q8NDA2 5059 aa8.82□□□□□ -1
LINC01006-202ENST00000418309 PTTG1IPP53801 180 aa8.81□□□□□ -1
LINC01006-202ENST00000418309 C5orf38Q86SI9 138 aa8.81□□□□□ -1
LINC01006-202ENST00000418309 LINC01600Q96MT4 127 aa8.81□□□□□ -1
LINC01006-202ENST00000418309 NAT8Q9UHE5 227 aa8.81□□□□□ -1
LINC01006-202ENST00000418309 APOMO95445 188 aa8.8□□□□□ -1
LINC01006-202ENST00000418309 CKS2P33552 79 aa8.8□□□□□ -1
LINC01006-202ENST00000418309 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
LINC01006-202ENST00000418309 Q6ZRP5 223 aa8.8□□□□□ -1
LINC01006-202ENST00000418309 Q6ZUT4 128 aa8.8□□□□□ -1
LINC01006-202ENST00000418309 SMIM27A0A1W2PRY6 76 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 LINC00862A6NCI5 91 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 PEA15Q15121 130 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 REG3GQ6UW15 175 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 C20orf78Q9BR46 151 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 TIMM21Q9BVV7 248 aa8.79□□□□□ -1
LINC01006-202ENST00000418309 A0A1B0GW15 77 aa8.78□□□□□ -1
LINC01006-202ENST00000418309 C9JQL5 133 aa8.78□□□□□ -1
LINC01006-202ENST00000418309 C2orf48Q96LS8 159 aa8.78□□□□□ -1
LINC01006-202ENST00000418309 TRBV24-1A0A075B6N3 115 aa8.77□□□□□ -1.01
LINC01006-202ENST00000418309 TCAPO15273 167 aa8.77□□□□□ -1.01
LINC01006-202ENST00000418309 TNFRSF6BO95407 300 aa8.77□□□□□ -1.01
LINC01006-202ENST00000418309 RPL39P62891 51 aaKnown RBP8.77□□□□□ -1.01
LINC01006-202ENST00000418309 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
LINC01006-202ENST00000418309 SPAG11BQ08648 103 aa8.77□□□□□ -1.01
LINC01006-202ENST00000418309 MRPL54Q6P161 138 aaKnown RBP8.77□□□□□ -1.01
LINC01006-202ENST00000418309 A0A0J9YXV3 536 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms