RNA–Protein interactions for RNA: ENST00000414672.5

RHBDD3-204, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 900 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-204ENST00000414672 GVQW2A0A096LPI5 108 aaPredicted RBP13.44□□□□□ -0.26
RHBDD3-204ENST00000414672 SNAPINO95295 136 aa13.44□□□□□ -0.26
RHBDD3-204ENST00000414672 KRTAP10-8P60410 259 aa13.44□□□□□ -0.26
RHBDD3-204ENST00000414672 ISOC2Q96AB3 205 aa13.44□□□□□ -0.26
RHBDD3-204ENST00000414672 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
RHBDD3-204ENST00000414672 C19orf71A6NCJ1 209 aa13.43□□□□□ -0.26
RHBDD3-204ENST00000414672 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-204ENST00000414672 IGKV2-29A2NJV5 120 aaPredicted RBP13.41□□□□□ -0.26
RHBDD3-204ENST00000414672 RHEBQ15382 184 aa13.41□□□□□ -0.26
RHBDD3-204ENST00000414672 TWIST1Q15672 202 aa13.41□□□□□ -0.26
RHBDD3-204ENST00000414672 PKIGQ9Y2B9 76 aa13.41□□□□□ -0.26
RHBDD3-204ENST00000414672 TRAV26-2A0A0B4J265 109 aa13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 MT-ND4LP03901 98 aa13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 FAM231DQ6ZW35 169 aa13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 GATD1Q8NB37 220 aa13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 RNASE7Q9H1E1 156 aaKnown RBP13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 OSTCQ9NRP0 149 aa13.4□□□□□ -0.26
RHBDD3-204ENST00000414672 PPP1R2P9O14990 202 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 XCL1P47992 114 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 FOXI1Q12951 378 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 Q6ZRP5 223 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 NUDT10Q8NFP7 164 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 NUDT11Q96G61 164 aa13.39□□□□□ -0.27
RHBDD3-204ENST00000414672 C7orf77A4D0Y5 90 aa13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 GATCO43716 136 aaKnown RBP13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 APCSP02743 223 aa13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 FGF6P10767 208 aa13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 ANAPC16Q96DE5 110 aa13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 LINC00526Q96FQ7 95 aa13.38□□□□□ -0.27
RHBDD3-204ENST00000414672 GAS8-AS1O95177 125 aa13.37□□□□□ -0.27
RHBDD3-204ENST00000414672 NCR2O95944 276 aa13.37□□□□□ -0.27
RHBDD3-204ENST00000414672 CARD19Q96LW7 228 aa13.37□□□□□ -0.27
RHBDD3-204ENST00000414672 CTDSP1Q9GZU7 261 aa13.37□□□□□ -0.27
RHBDD3-204ENST00000414672 RPS10P5Q9NQ39 176 aa13.37□□□□□ -0.27
RHBDD3-204ENST00000414672 H7C423 109 aa13.36□□□□□ -0.27
RHBDD3-204ENST00000414672 SRSF9Q13242 221 aaKnown RBP eCLIP13.36□□□□□ -0.27
RHBDD3-204ENST00000414672 RPL39LQ96EH5 51 aaKnown RBP13.36□□□□□ -0.27
RHBDD3-204ENST00000414672 RPP21Q9H633 154 aaKnown RBP13.36□□□□□ -0.27
RHBDD3-204ENST00000414672 CTRLP40313 264 aa13.35□□□□□ -0.27
RHBDD3-204ENST00000414672 OR5A1Q8NGJ0 315 aa13.35□□□□□ -0.27
RHBDD3-204ENST00000414672 TMEM101Q96IK0 257 aa13.35□□□□□ -0.27
RHBDD3-204ENST00000414672 BTF3L4Q96K17 158 aa13.35□□□□□ -0.27
RHBDD3-204ENST00000414672 IGHV1-58A0A0C4DH39 117 aa13.34□□□□□ -0.27
RHBDD3-204ENST00000414672 CCL25O15444 150 aa13.34□□□□□ -0.27
RHBDD3-204ENST00000414672 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
RHBDD3-204ENST00000414672 V9GYV3 84 aa13.34□□□□□ -0.27
RHBDD3-204ENST00000414672 CT83Q5H943 113 aa13.33□□□□□ -0.28
RHBDD3-204ENST00000414672 ZNF561-AS1K7EIQ3 104 aa13.32□□□□□ -0.28
RHBDD3-204ENST00000414672 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
RHBDD3-204ENST00000414672 PMCHP20382 165 aa13.32□□□□□ -0.28
RHBDD3-204ENST00000414672 SYCNQ0VAF6 134 aa13.32□□□□□ -0.28
RHBDD3-204ENST00000414672 TMEM242Q9NWH2 141 aa13.32□□□□□ -0.28
RHBDD3-204ENST00000414672 LINC00959A0A1B0GUT2 108 aa13.31□□□□□ -0.28
RHBDD3-204ENST00000414672 SDHAF1A6NFY7 115 aa13.31□□□□□ -0.28
RHBDD3-204ENST00000414672 A8MWL6 223 aa13.31□□□□□ -0.28
RHBDD3-204ENST00000414672 GAGE2BQ13066 116 aa13.3□□□□□ -0.28
RHBDD3-204ENST00000414672 SS18Q15532 418 aa13.3□□□□□ -0.28
RHBDD3-204ENST00000414672 CNFNQ9BYD5 112 aa13.3□□□□□ -0.28
RHBDD3-204ENST00000414672 I3L3M4 83 aa13.29□□□□□ -0.28
RHBDD3-204ENST00000414672 FOXA3P55318 350 aaPredicted RBP13.29□□□□□ -0.28
RHBDD3-204ENST00000414672 TSKUQ8WUA8 353 aa13.29□□□□□ -0.28
RHBDD3-204ENST00000414672 FAM231BA6NCW3 169 aa13.28□□□□□ -0.28
RHBDD3-204ENST00000414672 PTTG1IPP53801 180 aa13.28□□□□□ -0.28
RHBDD3-204ENST00000414672 IMMP2LQ96T52 175 aa13.28□□□□□ -0.28
RHBDD3-204ENST00000414672 SMIM27A0A1W2PRY6 76 aa13.27□□□□□ -0.29
RHBDD3-204ENST00000414672 S100PP25815 95 aa13.27□□□□□ -0.29
RHBDD3-204ENST00000414672 SMCO4Q9NRQ5 59 aa13.27□□□□□ -0.29
RHBDD3-204ENST00000414672 LOC107984640A0A0U1RRK4 108 aa13.26□□□□□ -0.29
RHBDD3-204ENST00000414672 CAMPP49913 170 aa13.26□□□□□ -0.29
RHBDD3-204ENST00000414672 CD164L2Q6UWJ8 174 aa13.26□□□□□ -0.29
RHBDD3-204ENST00000414672 MRAP2Q96G30 205 aa13.25□□□□□ -0.29
RHBDD3-204ENST00000414672 NAT8BQ9UHF3 227 aa13.25□□□□□ -0.29
RHBDD3-204ENST00000414672 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
RHBDD3-204ENST00000414672 SCO1O75880 301 aa13.24□□□□□ -0.29
RHBDD3-204ENST00000414672 MT-ND6P03923 174 aa13.24□□□□□ -0.29
RHBDD3-204ENST00000414672 MALP21145 153 aa13.24□□□□□ -0.29
RHBDD3-204ENST00000414672 CBLN2Q8IUK8 224 aa13.24□□□□□ -0.29
RHBDD3-204ENST00000414672 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
RHBDD3-204ENST00000414672 A0A1W2PNN7 141 aa13.23□□□□□ -0.29
RHBDD3-204ENST00000414672 ST20Q9HBF5 79 aa13.23□□□□□ -0.29
RHBDD3-204ENST00000414672 TSHBP01222 138 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 ESDP10768 282 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 ZNF664Q8N3J9 261 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 NUP35Q8NFH5 326 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 CDC42SE2Q9NRR3 84 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 PSORS1C2Q9UIG4 136 aa13.22□□□□□ -0.29
RHBDD3-204ENST00000414672 TRAV9-1A0A075B6T8 112 aa13.21□□□□□ -0.29
RHBDD3-204ENST00000414672 TRBV6-5A0A0K0K1A5 114 aa13.21□□□□□ -0.29
RHBDD3-204ENST00000414672 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
RHBDD3-204ENST00000414672 CAMK2N2Q96S95 79 aa13.2□□□□□ -0.3
RHBDD3-204ENST00000414672 COX7A2LO14548 114 aa13.19□□□□□ -0.3
RHBDD3-204ENST00000414672 C9orf116Q5BN46 136 aaPredicted RBP13.19□□□□□ -0.3
RHBDD3-204ENST00000414672 MRPL52Q86TS9 123 aaKnown RBP13.19□□□□□ -0.3
RHBDD3-204ENST00000414672 A0A1B0GUT8 65 aa13.18□□□□□ -0.3
RHBDD3-204ENST00000414672 APOMO95445 188 aa13.18□□□□□ -0.3
RHBDD3-204ENST00000414672 RPL18AQ02543 176 aaKnown RBP13.18□□□□□ -0.3
RHBDD3-204ENST00000414672 C1orf196B1AJZ1 125 aa13.17□□□□□ -0.3
RHBDD3-204ENST00000414672 RIGQ13278 110 aa13.17□□□□□ -0.3
RHBDD3-204ENST00000414672 MRPL54Q6P161 138 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms