RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 SS18Q15532 418 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 SCXQ7RTU7 201 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 ATP5L2Q7Z4Y8 100 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 MRPL52Q86TS9 123 aaKnown RBP7.27□□□□□ -1.25
RFFL-204ENST00000414419 C9orf163Q8N9P6 203 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 TMEM18Q96B42 140 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 C20orf78Q9BR46 151 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 CHAC1Q9BUX1 264 aa7.27□□□□□ -1.25
RFFL-204ENST00000414419 TRBV24-1A0A075B6N3 115 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 A0A1B0GXF2 115 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 D6R8Y8 96 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 ATP6V1G1O75348 118 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 TNFRSF6BO95407 300 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 PPBPP02775 128 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 PLA2G1BP04054 148 aaKnown RBP7.26□□□□□ -1.25
RFFL-204ENST00000414419 ZNF664Q8N3J9 261 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
RFFL-204ENST00000414419 LINC00959A0A1B0GUT2 108 aa7.25□□□□□ -1.25
RFFL-204ENST00000414419 XCL1P47992 114 aa7.25□□□□□ -1.25
RFFL-204ENST00000414419 CNBPP62633 177 aaKnown RBP7.25□□□□□ -1.25
RFFL-204ENST00000414419 LINC00528Q8N1L1 170 aa7.25□□□□□ -1.25
RFFL-204ENST00000414419 CIRBP-AS1Q8TBR5 109 aa7.25□□□□□ -1.25
RFFL-204ENST00000414419 IGHV3-64A0A075B6Q5 118 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 PHOX2AO14813 284 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 CCL25O15444 150 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 RPL32P62910 135 aaKnown RBP7.24□□□□□ -1.25
RFFL-204ENST00000414419 UQCC3Q6UW78 93 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 ORMDL3Q8N138 153 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 DPH3Q96FX2 82 aa7.24□□□□□ -1.25
RFFL-204ENST00000414419 CSDC2Q9Y534 153 aaKnown RBP7.24□□□□□ -1.25
RFFL-204ENST00000414419 ABCA13Q86UQ4 5058 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 NPYP01303 97 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 FOXI1Q12951 378 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 TMEM136Q6ZRR5 245 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 C15orf56Q8N910 161 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 SMIM2Q9BVW6 85 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 UBE2D4Q9Y2X8 147 aa7.23□□□□□ -1.25
RFFL-204ENST00000414419 SRRM2Q9UQ35 2752 aaKnown RBP7.23□□□□□ -1.25
RFFL-204ENST00000414419 C1orf196B1AJZ1 125 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 RAB5AP20339 215 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 CD164L2Q6UWJ8 174 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 SDIM1Q6ZPB5 146 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 PRELID3AQ96N28 172 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 TIMM21Q9BVV7 248 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 FAT1Q14517 4588 aa7.22□□□□□ -1.25
RFFL-204ENST00000414419 GVQW2A0A096LPI5 108 aaPredicted RBP7.21□□□□□ -1.26
RFFL-204ENST00000414419 IGHV1-58A0A0C4DH39 117 aa7.21□□□□□ -1.26
RFFL-204ENST00000414419 MALP21145 153 aa7.21□□□□□ -1.26
RFFL-204ENST00000414419 IFITM2Q01629 132 aa7.21□□□□□ -1.26
RFFL-204ENST00000414419 RNASE13Q5GAN3 156 aaKnown RBP7.21□□□□□ -1.26
RFFL-204ENST00000414419 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.26
RFFL-204ENST00000414419 TRAV13-1A0A0B4J241 112 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 TMEM218A2RU14 115 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 ZNF561-AS1K7EIQ3 104 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 SLPIP03973 132 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 RPL39P62891 51 aaKnown RBP7.2□□□□□ -1.26
RFFL-204ENST00000414419 MAP1LC3AQ9H492 121 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 LAMTOR2Q9Y2Q5 125 aa7.2□□□□□ -1.26
RFFL-204ENST00000414419 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
RFFL-204ENST00000414419 FLG2Q5D862 2391 aaPredicted RBP7.2□□□□□ -1.26
RFFL-204ENST00000414419 LOC389332A0A1B0GUA5 103 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 COX7A2LO14548 114 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 Q6ZUT4 128 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 CTDSP1Q9GZU7 261 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 SPANXA1Q9NS26 97 aa7.19□□□□□ -1.26
RFFL-204ENST00000414419 ADCYAP1P18509 176 aa7.18□□□□□ -1.26
RFFL-204ENST00000414419 IFI27P40305 119 aaPredicted RBP7.18□□□□□ -1.26
RFFL-204ENST00000414419 COX6A2Q02221 97 aa7.18□□□□□ -1.26
RFFL-204ENST00000414419 COMMD7Q86VX2 200 aa7.18□□□□□ -1.26
RFFL-204ENST00000414419 SEC11CQ9BY50 192 aa7.18□□□□□ -1.26
RFFL-204ENST00000414419 PKIGQ9Y2B9 76 aa7.18□□□□□ -1.26
RFFL-204ENST00000414419 APOMO95445 188 aa7.17□□□□□ -1.26
RFFL-204ENST00000414419 S100PP25815 95 aa7.17□□□□□ -1.26
RFFL-204ENST00000414419 PRSS47A8MTI9 375 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 PANO1I0J062 215 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 CHTF8P0CG12 524 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 RPL37AP61513 92 aaKnown RBP7.16□□□□□ -1.26
RFFL-204ENST00000414419 MRPS36P82909 103 aaKnown RBP7.16□□□□□ -1.26
RFFL-204ENST00000414419 CIRBPQ14011 172 aaKnown RBP7.16□□□□□ -1.26
RFFL-204ENST00000414419 C5orf38Q86SI9 138 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 Q8N8P6 123 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 LINC00526Q96FQ7 95 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 CARD19Q96LW7 228 aa7.16□□□□□ -1.26
RFFL-204ENST00000414419 OPRPNQ99935 248 aaPredicted RBP7.16□□□□□ -1.26
RFFL-204ENST00000414419 VPS13BQ7Z7G8 4022 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 TRAV9-1A0A075B6T8 112 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 A0A087WYN8 130 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 IGKV2-24A0A0C4DH68 120 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 IFITM10A6NMD0 228 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 SYCNQ0VAF6 134 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 MAJINQ3KP22 176 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 PRSS3P2Q8NHM4 247 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.26
RFFL-204ENST00000414419 IGLV4-69A0A075B6H9 119 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 K7EMI3 77 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 ORMDL2Q53FV1 153 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 CAMK2N2Q96S95 79 aa7.14□□□□□ -1.27
RFFL-204ENST00000414419 NXT2Q9NPJ8 142 aaKnown RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms