RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 FAT4Q6V0I7 4981 aa7.42□□□□□ -1.22
LIMS2-210ENST00000413578 LOC107984640A0A0U1RRK4 108 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 BCL2P10415 239 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 TMEM101Q96IK0 257 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 BTF3L4Q96K17 158 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 FAM210AQ96ND0 272 aa7.41□□□□□ -1.22
LIMS2-210ENST00000413578 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
LIMS2-210ENST00000413578 IGLV4-69A0A075B6H9 119 aa7.4□□□□□ -1.22
LIMS2-210ENST00000413578 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.4□□□□□ -1.22
LIMS2-210ENST00000413578 GAGE2BQ13066 116 aa7.4□□□□□ -1.22
LIMS2-210ENST00000413578 C9orf116Q5BN46 136 aaPredicted RBP7.4□□□□□ -1.22
LIMS2-210ENST00000413578 ZNF664Q8N3J9 261 aa7.4□□□□□ -1.22
LIMS2-210ENST00000413578 PMCHP20382 165 aa7.39□□□□□ -1.23
LIMS2-210ENST00000413578 POLR2KP53803 58 aaKnown RBP7.39□□□□□ -1.23
LIMS2-210ENST00000413578 SS18Q15532 418 aa7.39□□□□□ -1.23
LIMS2-210ENST00000413578 ISOC2Q96AB3 205 aa7.39□□□□□ -1.23
LIMS2-210ENST00000413578 MRAP2Q96G30 205 aa7.39□□□□□ -1.23
LIMS2-210ENST00000413578 TMEM242Q9NWH2 141 aa7.39□□□□□ -1.23
LIMS2-210ENST00000413578 APOMO95445 188 aa7.38□□□□□ -1.23
LIMS2-210ENST00000413578 RGS21Q2M5E4 152 aa7.38□□□□□ -1.23
LIMS2-210ENST00000413578 EIF5AL1Q6IS14 154 aaKnown RBP7.38□□□□□ -1.23
LIMS2-210ENST00000413578 SMIM15Q7Z3B0 74 aa7.38□□□□□ -1.23
LIMS2-210ENST00000413578 OCC1Q8TAD7 63 aa7.38□□□□□ -1.23
LIMS2-210ENST00000413578 C2orf48Q96LS8 159 aa7.38□□□□□ -1.23
LIMS2-210ENST00000413578 TRBV27A0A0K0K1C4 114 aa7.37□□□□□ -1.23
LIMS2-210ENST00000413578 TEX46H3BTG2 121 aa7.37□□□□□ -1.23
LIMS2-210ENST00000413578 MT-ND6P03923 174 aa7.37□□□□□ -1.23
LIMS2-210ENST00000413578 C1orf137Q5JT78 98 aa7.37□□□□□ -1.23
LIMS2-210ENST00000413578 PHF5AQ7RTV0 110 aaKnown RBP7.37□□□□□ -1.23
LIMS2-210ENST00000413578 PRR26Q8N8Z3 221 aa7.37□□□□□ -1.23
LIMS2-210ENST00000413578 C7orf77A4D0Y5 90 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 C1orf196B1AJZ1 125 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 COX7A2LO14548 114 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 FAM231DQ6ZW35 169 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 CAMK2N2Q96S95 79 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 ST20Q9HBF5 79 aa7.36□□□□□ -1.23
LIMS2-210ENST00000413578 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
LIMS2-210ENST00000413578 IGLV7-43P04211 117 aa7.35□□□□□ -1.23
LIMS2-210ENST00000413578 KRTAP1-4P0C5Y4 121 aa7.35□□□□□ -1.23
LIMS2-210ENST00000413578 MALP21145 153 aa7.35□□□□□ -1.23
LIMS2-210ENST00000413578 CT83Q5H943 113 aa7.35□□□□□ -1.23
LIMS2-210ENST00000413578 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
LIMS2-210ENST00000413578 H0Y9J4 135 aa7.34□□□□□ -1.23
LIMS2-210ENST00000413578 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
LIMS2-210ENST00000413578 RNF151Q2KHN1 245 aa7.34□□□□□ -1.23
LIMS2-210ENST00000413578 DIRC1Q969H9 104 aa7.34□□□□□ -1.23
LIMS2-210ENST00000413578 TMEM191AQ9H0A3 160 aa7.34□□□□□ -1.23
LIMS2-210ENST00000413578 UBE2D4Q9Y2X8 147 aa7.34□□□□□ -1.23
LIMS2-210ENST00000413578 A8MWL6 223 aa7.33□□□□□ -1.24
LIMS2-210ENST00000413578 GATCO43716 136 aaKnown RBP7.33□□□□□ -1.24
LIMS2-210ENST00000413578 RAB4AP20338 218 aa7.33□□□□□ -1.24
LIMS2-210ENST00000413578 RPL18AQ02543 176 aaKnown RBP7.33□□□□□ -1.24
LIMS2-210ENST00000413578 OPRPNQ99935 248 aaPredicted RBP7.33□□□□□ -1.24
LIMS2-210ENST00000413578 IGLV1-50A0A075B6I6 118 aa7.32□□□□□ -1.24
LIMS2-210ENST00000413578 RNASE13Q5GAN3 156 aaKnown RBP7.32□□□□□ -1.24
LIMS2-210ENST00000413578 C5orf38Q86SI9 138 aa7.32□□□□□ -1.24
LIMS2-210ENST00000413578 KRTAP9-2Q9BYQ4 174 aa7.32□□□□□ -1.24
LIMS2-210ENST00000413578 MRPL35Q9NZE8 188 aaKnown RBP7.32□□□□□ -1.24
LIMS2-210ENST00000413578 TRAV13-1A0A0B4J241 112 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 TMEM250H0YL14 139 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 SPAG11BQ08648 103 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 Q6ZUT4 128 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 AMN1Q8IY45 258 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 NRACQ8N912 160 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 FAM104AQ969W3 186 aa7.31□□□□□ -1.24
LIMS2-210ENST00000413578 A0A1B0GUT8 65 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 FAM168BA1KXE4 195 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 HIGD1CA8MV81 97 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 VCYO14598 125 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 KRTAP7-1Q8IUC3 87 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
LIMS2-210ENST00000413578 A0A087WZ39 114 aa7.29□□□□□ -1.24
LIMS2-210ENST00000413578 F8WDY8 70 aa7.29□□□□□ -1.24
LIMS2-210ENST00000413578 SMKR1H3BMG3 65 aa7.29□□□□□ -1.24
LIMS2-210ENST00000413578 C10orf25Q5T742 122 aa7.29□□□□□ -1.24
LIMS2-210ENST00000413578 TSKUQ8WUA8 353 aa7.29□□□□□ -1.24
LIMS2-210ENST00000413578 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
LIMS2-210ENST00000413578 FCER1GP30273 86 aa7.28□□□□□ -1.24
LIMS2-210ENST00000413578 SUMO2P61956 95 aaKnown RBP7.28□□□□□ -1.24
LIMS2-210ENST00000413578 SMAGPQ0VAQ4 97 aa7.28□□□□□ -1.24
LIMS2-210ENST00000413578 IMMP2LQ96T52 175 aa7.28□□□□□ -1.24
LIMS2-210ENST00000413578 SLC51BQ86UW2 128 aa7.27□□□□□ -1.25
LIMS2-210ENST00000413578 BORCS7Q96B45 105 aa7.27□□□□□ -1.25
LIMS2-210ENST00000413578 C6orf48Q9UBA6 75 aa7.27□□□□□ -1.25
LIMS2-210ENST00000413578 PPP1R17O96001 155 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 LCE2AQ5TA79 106 aaPredicted RBP7.26□□□□□ -1.25
LIMS2-210ENST00000413578 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 LINC01551Q86U37 167 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 ORAOV1Q8WV07 137 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 KIR2DL4Q99706 377 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 SMDT1Q9H4I9 107 aa7.26□□□□□ -1.25
LIMS2-210ENST00000413578 MUC17Q685J3 4493 aa7.25□□□□□ -1.25
LIMS2-210ENST00000413578 NDUFA1O15239 70 aa7.25□□□□□ -1.25
LIMS2-210ENST00000413578 RPL32P62910 135 aaKnown RBP7.25□□□□□ -1.25
LIMS2-210ENST00000413578 PRR4Q16378 134 aa7.25□□□□□ -1.25
LIMS2-210ENST00000413578 TMEM241Q24JQ0 296 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms