RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 BTF3L4Q96K17 158 aa10.39□□□□□ -0.75
MRPL55-220ENST00000411464 SMIM7Q9BQ49 75 aa10.39□□□□□ -0.75
MRPL55-220ENST00000411464 IGHV1-58A0A0C4DH39 117 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 ZNF727A8MUV8 499 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 ZNF25P17030 456 aaPredicted RBP10.38□□□□□ -0.75
MRPL55-220ENST00000411464 SRSF9Q13242 221 aaKnown RBP eCLIP10.38□□□□□ -0.75
MRPL55-220ENST00000411464 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 OR5A1Q8NGJ0 315 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
MRPL55-220ENST00000411464 TMEM101Q96IK0 257 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 CNFNQ9BYD5 112 aa10.38□□□□□ -0.75
MRPL55-220ENST00000411464 CCL25O15444 150 aa10.37□□□□□ -0.75
MRPL55-220ENST00000411464 LINC00526Q96FQ7 95 aa10.37□□□□□ -0.75
MRPL55-220ENST00000411464 LINC00959A0A1B0GUT2 108 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 SDHAF1A6NFY7 115 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 ZNF561-AS1K7EIQ3 104 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 PMCHP20382 165 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 FAM74A3Q4VXF1 159 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 OCC1Q8TAD7 63 aa10.36□□□□□ -0.75
MRPL55-220ENST00000411464 RPP21Q9H633 154 aaKnown RBP10.36□□□□□ -0.75
MRPL55-220ENST00000411464 K7EN84 100 aa10.35□□□□□ -0.75
MRPL55-220ENST00000411464 SYCNQ0VAF6 134 aa10.35□□□□□ -0.75
MRPL55-220ENST00000411464 I3L3M4 83 aa10.34□□□□□ -0.75
MRPL55-220ENST00000411464 FOXA3P55318 350 aaPredicted RBP10.34□□□□□ -0.75
MRPL55-220ENST00000411464 SS18Q15532 418 aa10.34□□□□□ -0.75
MRPL55-220ENST00000411464 TMEM241Q24JQ0 296 aa10.34□□□□□ -0.75
MRPL55-220ENST00000411464 RNASE7Q9H1E1 156 aaKnown RBP10.34□□□□□ -0.75
MRPL55-220ENST00000411464 TMEM218A2RU14 115 aa10.33□□□□□ -0.76
MRPL55-220ENST00000411464 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
MRPL55-220ENST00000411464 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
MRPL55-220ENST00000411464 NAT8Q9UHE5 227 aa10.33□□□□□ -0.76
MRPL55-220ENST00000411464 FAM231BA6NCW3 169 aa10.32□□□□□ -0.76
MRPL55-220ENST00000411464 PTTG1IPP53801 180 aa10.32□□□□□ -0.76
MRPL55-220ENST00000411464 RPL23P62829 140 aaKnown RBP10.32□□□□□ -0.76
MRPL55-220ENST00000411464 CD164L2Q6UWJ8 174 aa10.32□□□□□ -0.76
MRPL55-220ENST00000411464 ISOC2Q96AB3 205 aa10.32□□□□□ -0.76
MRPL55-220ENST00000411464 ADCYAP1P18509 176 aa10.31□□□□□ -0.76
MRPL55-220ENST00000411464 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
MRPL55-220ENST00000411464 ADIRFQ15847 76 aa10.31□□□□□ -0.76
MRPL55-220ENST00000411464 MRAP2Q96G30 205 aa10.31□□□□□ -0.76
MRPL55-220ENST00000411464 TRBV6-5A0A0K0K1A5 114 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 F8W036 122 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 CAMPP49913 170 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 SLC7A5P1Q8MH63 180 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 CDC42SE2Q9NRR3 84 aa10.3□□□□□ -0.76
MRPL55-220ENST00000411464 ESDP10768 282 aa10.29□□□□□ -0.76
MRPL55-220ENST00000411464 MALP21145 153 aa10.29□□□□□ -0.76
MRPL55-220ENST00000411464 ZNF664Q8N3J9 261 aa10.29□□□□□ -0.76
MRPL55-220ENST00000411464 ST20Q9HBF5 79 aa10.29□□□□□ -0.76
MRPL55-220ENST00000411464 IGLV4-69A0A075B6H9 119 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 TSHBP01222 138 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 MT-ND6P03923 174 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
MRPL55-220ENST00000411464 SEC11CQ9BY50 192 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 TMEM242Q9NWH2 141 aa10.28□□□□□ -0.76
MRPL55-220ENST00000411464 A0A1W2PNN7 141 aa10.27□□□□□ -0.77
MRPL55-220ENST00000411464 GATCO43716 136 aaKnown RBP10.27□□□□□ -0.77
MRPL55-220ENST00000411464 NDUFA5Q16718 116 aa10.27□□□□□ -0.77
MRPL55-220ENST00000411464 A8MWL6 223 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 C1orf196B1AJZ1 125 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 COX7A2LO14548 114 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 BORCS7Q96B45 105 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 CAMK2N2Q96S95 79 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 OSTCQ9NRP0 149 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
MRPL55-220ENST00000411464 APOMO95445 188 aa10.25□□□□□ -0.77
MRPL55-220ENST00000411464 PNRC1Q12796 327 aaPredicted RBP10.25□□□□□ -0.77
MRPL55-220ENST00000411464 C10orf91Q5T1B1 145 aa10.25□□□□□ -0.77
MRPL55-220ENST00000411464 NUP35Q8NFH5 326 aa10.25□□□□□ -0.77
MRPL55-220ENST00000411464 C7orf77A4D0Y5 90 aa10.24□□□□□ -0.77
MRPL55-220ENST00000411464 C9orf116Q5BN46 136 aaPredicted RBP10.24□□□□□ -0.77
MRPL55-220ENST00000411464 CARHSP1Q9Y2V2 147 aaKnown RBP10.24□□□□□ -0.77
MRPL55-220ENST00000411464 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
MRPL55-220ENST00000411464 POLR2KP53803 58 aaKnown RBP10.23□□□□□ -0.77
MRPL55-220ENST00000411464 C1orf137Q5JT78 98 aa10.23□□□□□ -0.77
MRPL55-220ENST00000411464 V9GYV3 84 aa10.23□□□□□ -0.77
MRPL55-220ENST00000411464 FCER1GP30273 86 aa10.22□□□□□ -0.77
MRPL55-220ENST00000411464 RPL18AQ02543 176 aaKnown RBP10.22□□□□□ -0.77
MRPL55-220ENST00000411464 SMAGPQ0VAQ4 97 aa10.22□□□□□ -0.77
MRPL55-220ENST00000411464 C2orf48Q96LS8 159 aa10.22□□□□□ -0.77
MRPL55-220ENST00000411464 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.21□□□□□ -0.77
MRPL55-220ENST00000411464 VCYO14598 125 aa10.21□□□□□ -0.77
MRPL55-220ENST00000411464 CT83Q5H943 113 aa10.21□□□□□ -0.77
MRPL55-220ENST00000411464 TMEM191AQ9H0A3 160 aa10.21□□□□□ -0.77
MRPL55-220ENST00000411464 CSDC2Q9Y534 153 aaKnown RBP10.21□□□□□ -0.77
MRPL55-220ENST00000411464 TRAV13-1A0A0B4J241 112 aa10.2□□□□□ -0.78
MRPL55-220ENST00000411464 A0A1B0GUT8 65 aa10.2□□□□□ -0.78
MRPL55-220ENST00000411464 APOC3P02656 99 aa10.2□□□□□ -0.78
MRPL55-220ENST00000411464 PHF5AQ7RTV0 110 aaKnown RBP10.2□□□□□ -0.78
MRPL55-220ENST00000411464 DIRC1Q969H9 104 aa10.2□□□□□ -0.78
MRPL55-220ENST00000411464 PPP1R2P9O14990 202 aa10.19□□□□□ -0.78
MRPL55-220ENST00000411464 MT-ND4LP03901 98 aa10.19□□□□□ -0.78
MRPL55-220ENST00000411464 RAB4AP20338 218 aa10.19□□□□□ -0.78
MRPL55-220ENST00000411464 C5orf38Q86SI9 138 aa10.19□□□□□ -0.78
MRPL55-220ENST00000411464 TSKUQ8WUA8 353 aa10.19□□□□□ -0.78
MRPL55-220ENST00000411464 OPRPNQ99935 248 aaPredicted RBP10.19□□□□□ -0.78
MRPL55-220ENST00000411464 RNF151Q2KHN1 245 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms