RNA–Protein interactions for RNA: ENST00000410876.1

RNU4-47P-201, Transcript of RNA, U4 small nuclear 47, pseudogene, humanhuman

BASIC

Gene RNU4-47P, Length 114 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-47P-201ENST00000410876 SUMO2P61956 95 aaKnown RBP2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 SEC11AP67812 179 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 CTAG1AP78358 180 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 MRPS36P82909 103 aaKnown RBP2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 PNRC1Q12796 327 aaPredicted RBP2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 FOXI1Q12951 378 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 GAGE6Q13070 117 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 PAPPA-AS1Q5QFB9 102 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 FAM104BQ5XKR9 115 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 SPINK6Q6UWN8 80 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 ALKAL2Q6UX46 152 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 Q8N3U1 123 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 OR10D4PQ8NGN7 298 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 CHCHD10Q8WYQ3 142 aaPredicted RBP2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 IMMP2LQ96T52 175 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 RNASE7Q9H1E1 156 aaKnown RBP2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 SPANXA1Q9NS26 97 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 DNAH11Q96DT5 4516 aa2.06□□□□□ -2.08
RNU4-47P-201ENST00000410876 HSPG2P98160 4391 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 RYR1P21817 5038 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 IGLV4-69A0A075B6H9 119 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 A0A087WYN8 130 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 MUC21A0A0G2JKD1 596 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 MUC21A0A140T8X8 626 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 A0A1B0GV50 99 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 GAGE12HA6NDE8 117 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 COX7A2LO14548 114 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 TSHBP01222 138 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 SLPIP03973 132 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 SRP19P09132 144 aaKnown RBP2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 TLX1NBP0CAT3 122 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 MALP21145 153 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 FCER1GP30273 86 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 SSTP61278 116 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 SYCNQ0VAF6 134 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 RNASEKQ6P5S7 137 aaKnown RBP2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 REG3GQ6UW15 175 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 Q6ZRP5 223 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 NUP35Q8NFH5 326 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 ANAPC16Q96DE5 110 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 LINC01600Q96MT4 127 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 V9GYV3 84 aa2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 DYNC1H1Q14204 4646 aaKnown RBP2.05□□□□□ -2.08
RNU4-47P-201ENST00000410876 SRRM2Q9UQ35 2752 aaKnown RBP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 TRAV9-1A0A075B6T8 112 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 IGHV3OR16-9A0A0B4J2B5 98 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 LOC107984640A0A0U1RRK4 108 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 MT-ND4LP03901 98 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 RAB5AP20339 215 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 CKS2P33552 79 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 FUSP35637 526 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 RPL23P62829 140 aaKnown RBP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 HBBP68871 147 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 COX6A2Q02221 97 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 SRSF9Q13242 221 aaKnown RBP eCLIP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 COX19Q49B96 90 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 FAM19A3Q7Z5A8 133 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 ORMDL3Q8N138 153 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 NRACQ8N912 160 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 CARD19Q96LW7 228 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 TMEM242Q9NWH2 141 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 MRPL35Q9NZE8 188 aaKnown RBP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 UBE2D4Q9Y2X8 147 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 LRP1BQ9NZR2 4599 aa2.04□□□□□ -2.08
RNU4-47P-201ENST00000410876 A0A087WZ39 114 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 TRAV26-2A0A0B4J265 109 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 TRBV30A0A0K0K1B3 111 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 A0A1B0GXF2 115 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 TNFRSF6BO95407 300 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 IFI27P40305 119 aaPredicted RBP2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 XCL1P47992 114 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 CAMPP49913 170 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 PTTG1IPP53801 180 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 RAB14P61106 215 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 MAJINQ3KP22 176 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 ORMDL2Q53FV1 153 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 UQCC3Q6UW78 93 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 AMN1Q8IY45 258 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 STPG4Q8N801 248 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 PRSS3P2Q8NHM4 247 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 RPL39LQ96EH5 51 aaKnown RBP2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 SMIM2Q9BVW6 85 aa2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 NXT2Q9NPJ8 142 aaKnown RBP2.03□□□□□ -2.08
RNU4-47P-201ENST00000410876 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 TGIF2-C20orf24A0A0A6YYL0 155 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 A0A0J9YXV3 536 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 IGKV2-29A2NJV5 120 aaPredicted RBP2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 NDUFA1O15239 70 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 CXCL5P42830 114 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 KRTAP10-8P60410 259 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 PRR3P79522 188 aaKnown RBP2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 ADIRFQ15847 76 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 LINC01620Q4KN68 170 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 MRPL51Q4U2R6 128 aaKnown RBP2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 SFTA2Q6UW10 78 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 CLPSL2Q6UWE3 100 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 Q6ZN92 141 aa2.02□□□□□ -2.09
RNU4-47P-201ENST00000410876 TMEM136Q6ZRR5 245 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms