RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 MRPL16Q9NX20 251 aaKnown RBP2.74□□□□□ -1.97
CLK1-203ENST00000409769 TRAPPC1Q9Y5R8 145 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 U3KQK5 164 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 NBEAL2Q6ZNJ1 2754 aa2.74□□□□□ -1.97
CLK1-203ENST00000409769 STARD9Q9P2P6 4700 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 DEFB4AO15263 64 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 TRGC2P03986 189 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 DEFA6Q01524 100 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 FABP9Q0Z7S8 132 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 PLECQ15149 4684 aaKnown RBP2.73□□□□□ -1.97
CLK1-203ENST00000409769 MRPL51Q4U2R6 128 aaKnown RBP2.73□□□□□ -1.97
CLK1-203ENST00000409769 FAM222AQ5U5X8 452 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 ZFP2Q6ZN57 461 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 FRZBQ92765 325 aa2.73□□□□□ -1.97
CLK1-203ENST00000409769 TRAV26-2A0A0B4J265 109 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 TRBV6-5A0A0K0K1A5 114 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 TRBV6-4A0A1B0GX49 114 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 D6R8Y8 96 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 M0QY20 66 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BKO60814 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 NPYP01303 97 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 IGHV3-53P01767 116 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 APCSP02743 223 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 PPBPP02775 128 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BJP06899 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 SPART-AS1P0CW21 52 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 LINC00694P0DN24 101 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BOP23527 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BBP33778 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 EMP1P54849 157 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BDP58876 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 RAB4BP61018 213 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BCP62807 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST2H2BEQ16778 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 C12orf74Q32Q52 190 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.72□□□□□ -1.97
CLK1-203ENST00000409769 SMIM15Q7Z3B0 74 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.72□□□□□ -1.97
CLK1-203ENST00000409769 OR4C5Q8NGB2 326 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 C7orf33Q8WU49 177 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BHQ93079 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 MRAP2Q96G30 205 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BNQ99877 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 HIST1H2BMQ99879 126 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 LAMTOR2Q9Y2Q5 125 aa2.72□□□□□ -1.97
CLK1-203ENST00000409769 DYNC2H1Q8NCM8 4307 aaKnown RBP2.72□□□□□ -1.97
CLK1-203ENST00000409769 DNAH7Q8WXX0 4024 aa2.71□□□□□ -1.97
CLK1-203ENST00000409769 STAB2Q8WWQ8 2551 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 IGLV2-18A0A075B6J9 118 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 TRGV2A0A075B6R0 118 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 IGHV3-73A0A0B4J1V6 119 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 LOC100131303A0A0U1RQF7 123 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 LINC01546A6NGU7 62 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 SMKR1H3BMG3 65 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 NCR2O95944 276 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 ATP5G1P05496 136 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 MGPP08493 103 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 SMIM17P0DL12 118 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 DEFB130BP0DP73 79 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 DEFB130AP0DP74 79 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 SRIP30626 198 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 CRYBA4P53673 196 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 Q0VG73 95 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 ZNF56Q15929 161 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 COA6Q5JTJ3 125 aaKnown RBP2.71□□□□□ -1.98
CLK1-203ENST00000409769 FAM74A4Q5TZK3 123 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 ORMDL3Q8N138 153 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 C18orf32Q8TCD1 76 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 RPL39LQ96EH5 51 aaKnown RBP2.71□□□□□ -1.98
CLK1-203ENST00000409769 PRELID3AQ96N28 172 aa2.71□□□□□ -1.98
CLK1-203ENST00000409769 TRBV10-1A0A0K0K1A3 114 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 C1orf196B1AJZ1 125 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 H7C1H1 209 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 PPP1R17O96001 155 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 P0DMU3 169 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 FAM231AP0DMU4 169 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 FAM231CP0DMU5 169 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 CKS2P33552 79 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 POLR2KP53803 58 aaKnown RBP2.7□□□□□ -1.98
CLK1-203ENST00000409769 RAB5BP61020 215 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 DAD1P61803 113 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 RHOHQ15669 191 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 IQCJQ1A5X6 159 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 OR10J3Q5JRS4 329 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 SLC25A29Q8N8R3 303 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 DNAJC30Q96LL9 226 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 C20orf78Q9BR46 151 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 TMEM70Q9BUB7 260 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 NIT2Q9NQR4 276 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 HHLA3Q9XRX5 114 aa2.7□□□□□ -1.98
CLK1-203ENST00000409769 FBN3Q75N90 2809 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 COL7A1Q02388 2944 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 TRBV7-3A0A075B6L6 115 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 TRGV4A0A0C4DH28 118 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 TRBV27A0A0K0K1C4 114 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 SDHAF1A6NFY7 115 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 H3BNG1 76 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 NUPR1O60356 82 aa2.69□□□□□ -1.98
CLK1-203ENST00000409769 ESDP10768 282 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms