RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 CCL25O15444 150 aa5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 TSHBP01222 138 aa5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 RPS10P46783 165 aaKnown RBP5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 POLR2KP53803 58 aaKnown RBP5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 SUMO2P61956 95 aaKnown RBP5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 SDIM1Q6ZPB5 146 aa5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 DPH3Q96FX2 82 aa5.85□□□□□ -1.47
SNORD88A-201ENST00000408314 GVQW2A0A096LPI5 108 aaPredicted RBP5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 IGHV1-58A0A0C4DH39 117 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 SMIM27A0A1W2PRY6 76 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 KRTAP29-1A8MX34 341 aaPredicted RBP5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 CIRBPQ14011 172 aaKnown RBP5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 FAM104BQ5XKR9 115 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 C15orf56Q8N910 161 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 C20orf78Q9BR46 151 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 LINC00474Q9P2X8 69 aa5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 CSDC2Q9Y534 153 aaKnown RBP5.84□□□□□ -1.47
SNORD88A-201ENST00000408314 LINC00959A0A1B0GUT2 108 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 A0A1B0GVG6 124 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 OXTP01178 125 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 PPBPP02775 128 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 CKS2P33552 79 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 XCL1P47992 114 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 RAB14P61106 215 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 RPL32P62910 135 aaKnown RBP5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 HBBP68871 147 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 CD164L2Q6UWJ8 174 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 ZNF664Q8N3J9 261 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 CDC42SE2Q9NRR3 84 aa5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.83□□□□□ -1.48
SNORD88A-201ENST00000408314 TRBV24-1A0A075B6N3 115 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 C1orf196B1AJZ1 125 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 ZNF561-AS1K7EIQ3 104 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 PHOX2AO14813 284 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 CAMPP49913 170 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 PNRC1Q12796 327 aaPredicted RBP5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 FOXI1Q12951 378 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 HIGD2BQ4VC39 106 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 ATP5L2Q7Z4Y8 100 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 SPACA4Q8TDM5 124 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 C7orf33Q8WU49 177 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 TIMM21Q9BVV7 248 aa5.82□□□□□ -1.48
SNORD88A-201ENST00000408314 MALP21145 153 aa5.81□□□□□ -1.48
SNORD88A-201ENST00000408314 MRPL51Q4U2R6 128 aaKnown RBP5.81□□□□□ -1.48
SNORD88A-201ENST00000408314 NRACQ8N912 160 aa5.81□□□□□ -1.48
SNORD88A-201ENST00000408314 A0A087WYN8 130 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 SMKR1H3BMG3 65 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 COX7A2LO14548 114 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 GAS8-AS1O95177 125 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 APOMO95445 188 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 KRTAP10-4P60372 401 aaPredicted RBP5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 COX6A2Q02221 97 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 MRPL54Q6P161 138 aaKnown RBP5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 CARD19Q96LW7 228 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 SMIM2Q9BVW6 85 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 SPANXA1Q9NS26 97 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 PLAC8Q9NZF1 115 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 UBE2D4Q9Y2X8 147 aa5.8□□□□□ -1.48
SNORD88A-201ENST00000408314 C9JQL5 133 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 D6R8Y8 96 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 TNFRSF6BO95407 300 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 MT-ND4LP03901 98 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 SLPIP03973 132 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 RAB5AP20339 215 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 SRSF3P84103 164 aaKnown RBP5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 SYCNQ0VAF6 134 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 ORMDL3Q8N138 153 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 LAMTOR2Q9Y2Q5 125 aa5.79□□□□□ -1.48
SNORD88A-201ENST00000408314 IGKV2-24A0A0C4DH68 120 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 A0A1B0GXF2 115 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 PANO1I0J062 215 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 MAJINQ3KP22 176 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 SERTAD4-AS1Q5TG53 156 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 ANAPC16Q96DE5 110 aa5.78□□□□□ -1.48
SNORD88A-201ENST00000408314 TRAV13-1A0A0B4J241 112 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 F8WDY8 70 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 CHTF8P0CG12 524 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 MRPS36P82909 103 aaKnown RBP5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 Q6ZRU5 148 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 OR10D4PQ8NGN7 298 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 PRSS3P2Q8NHM4 247 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 C2orf48Q96LS8 159 aa5.77□□□□□ -1.49
SNORD88A-201ENST00000408314 IGLV4-69A0A075B6H9 119 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 LOC107984640A0A0U1RRK4 108 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 NPYP01303 97 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 TMEM136Q6ZRR5 245 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 Q6ZUT4 128 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 STPG4Q8N801 248 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 PRELID3AQ96N28 172 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 CAMK2N2Q96S95 79 aa5.76□□□□□ -1.49
SNORD88A-201ENST00000408314 A0A096LNI7 61 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 TGIF2-C20orf24A0A0A6YYL0 155 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 IFITM10A6NMD0 228 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 K7EMI3 77 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 G0S2P27469 103 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 MAP1LC3AQ9H492 121 aa5.75□□□□□ -1.49
SNORD88A-201ENST00000408314 SPAG11BQ08648 103 aa5.74□□□□□ -1.49
SNORD88A-201ENST00000408314 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
SNORD88A-201ENST00000408314 RNASE13Q5GAN3 156 aaKnown RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms