RNA–Protein interactions for RNA: ENST00000400122.7

SMARCE1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-204ENST00000400122 LINC00959A0A1B0GUT2 108 aa9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 IGKV2-29A2NJV5 120 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 VCYO14598 125 aa9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 SRP19P09132 144 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 RIGQ13278 110 aa9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 V9GYV3 84 aa9.18□□□□□ -0.94
SMARCE1-204ENST00000400122 A0A1B0GW15 77 aa9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 C7orf77A4D0Y5 90 aa9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 PPP1R2P9O14990 202 aa9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 RPL32P62910 135 aaKnown RBP9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 CD164L2Q6UWJ8 174 aa9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 C7orf33Q8WU49 177 aa9.17□□□□□ -0.94
SMARCE1-204ENST00000400122 LINC00862A6NCI5 91 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 TCAPO15273 167 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 COX6A2Q02221 97 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 SS18Q15532 418 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 TMEM241Q24JQ0 296 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 ZNF664Q8N3J9 261 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 NUP35Q8NFH5 326 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 ISOC2Q96AB3 205 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 TIMM21Q9BVV7 248 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 NAT8BQ9UHF3 227 aa9.16□□□□□ -0.94
SMARCE1-204ENST00000400122 TRBV24-1A0A075B6N3 115 aa9.15□□□□□ -0.94
SMARCE1-204ENST00000400122 C1orf196B1AJZ1 125 aa9.15□□□□□ -0.94
SMARCE1-204ENST00000400122 DPH3Q96FX2 82 aa9.15□□□□□ -0.94
SMARCE1-204ENST00000400122 KIR2DL4Q99706 377 aa9.15□□□□□ -0.94
SMARCE1-204ENST00000400122 IGKV3OR2-268A0A0C4DH90 116 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 CEBPGP53567 150 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 SUMO2P61956 95 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 AMN1Q8IY45 258 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 NRACQ8N912 160 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 PRSS3P2Q8NHM4 247 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 TMEM242Q9NWH2 141 aa9.14□□□□□ -0.95
SMARCE1-204ENST00000400122 SMIM27A0A1W2PRY6 76 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 CHTF8P0CG12 524 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 XCL1P47992 114 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 FAM104BQ5XKR9 115 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 TMEM18Q96B42 140 aa9.13□□□□□ -0.95
SMARCE1-204ENST00000400122 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
SMARCE1-204ENST00000400122 NAT8Q9UHE5 227 aa9.12□□□□□ -0.95
SMARCE1-204ENST00000400122 TNXBP22105 4242 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 PHOX2AO14813 284 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 S100A8P05109 93 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 FCER1GP30273 86 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 CARD19Q96LW7 228 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 UBE2D4Q9Y2X8 147 aa9.11□□□□□ -0.95
SMARCE1-204ENST00000400122 hCG_2014768A0A024R1R8 64 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 F8WDY8 70 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 ZNF561-AS1K7EIQ3 104 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 SYCNQ0VAF6 134 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 PEA15Q15121 130 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 MAJINQ3KP22 176 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 STPG4Q8N801 248 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
SMARCE1-204ENST00000400122 A0A096LNI7 61 aa9.09□□□□□ -0.95
SMARCE1-204ENST00000400122 PPBPP02775 128 aa9.09□□□□□ -0.95
SMARCE1-204ENST00000400122 PRR3P79522 188 aaKnown RBP9.09□□□□□ -0.95
SMARCE1-204ENST00000400122 PLA2G2DQ9UNK4 145 aa9.09□□□□□ -0.95
SMARCE1-204ENST00000400122 COX7A2LO14548 114 aa9.08□□□□□ -0.96
SMARCE1-204ENST00000400122 CAMPP49913 170 aa9.08□□□□□ -0.96
SMARCE1-204ENST00000400122 RNF151Q2KHN1 245 aa9.08□□□□□ -0.96
SMARCE1-204ENST00000400122 MRPL51Q4U2R6 128 aaKnown RBP9.08□□□□□ -0.96
SMARCE1-204ENST00000400122 IGLV4-69A0A075B6H9 119 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 IGKV2-24A0A0C4DH68 120 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 F8W036 122 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 APOMO95445 188 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 ADIRFQ15847 76 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 LINC01600Q96MT4 127 aa9.07□□□□□ -0.96
SMARCE1-204ENST00000400122 LOC107984640A0A0U1RRK4 108 aa9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 CKS2P33552 79 aa9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 MRPS36P82909 103 aaKnown RBP9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 SPINK6Q6UWN8 80 aa9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 ATP5L2Q7Z4Y8 100 aa9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
SMARCE1-204ENST00000400122 UBR4Q5T4S7 5183 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 A0A1B0GXF2 115 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 C9JQL5 133 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 MALP21145 153 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 PTTG1IPP53801 180 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 HBBP68871 147 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 OR10D4PQ8NGN7 298 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 SMIM2Q9BVW6 85 aa9.05□□□□□ -0.96
SMARCE1-204ENST00000400122 SMKR1H3BMG3 65 aa9.04□□□□□ -0.96
SMARCE1-204ENST00000400122 TNFRSF6BO95407 300 aa9.04□□□□□ -0.96
SMARCE1-204ENST00000400122 Q6ZRP5 223 aa9.04□□□□□ -0.96
SMARCE1-204ENST00000400122 PRSS47A8MTI9 375 aa9.03□□□□□ -0.96
SMARCE1-204ENST00000400122 SRSF9Q13242 221 aaKnown RBP eCLIP9.03□□□□□ -0.96
SMARCE1-204ENST00000400122 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
SMARCE1-204ENST00000400122 IGHV3OR16-9A0A0B4J2B5 98 aa9.02□□□□□ -0.97
SMARCE1-204ENST00000400122 Q6ZUT4 128 aa9.02□□□□□ -0.97
SMARCE1-204ENST00000400122 FAM104AQ969W3 186 aa9.02□□□□□ -0.97
SMARCE1-204ENST00000400122 MRPL35Q9NZE8 188 aaKnown RBP9.02□□□□□ -0.97
SMARCE1-204ENST00000400122 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
SMARCE1-204ENST00000400122 TRAV13-1A0A0B4J241 112 aa9.01□□□□□ -0.97
SMARCE1-204ENST00000400122 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms