RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 A0A1B0GXF2 115 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 D6R8Y8 96 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 VCYO14598 125 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 ESDP10768 282 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 POLR2KP53803 58 aaKnown RBP5.47□□□□□ -1.53
USP16-202ENST00000399973 HIGD2BQ4VC39 106 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 DGAT2L7PQ6IED9 249 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 Q6ZSA8 131 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 CHCHD10Q8WYQ3 142 aaPredicted RBP5.47□□□□□ -1.53
USP16-202ENST00000399973 KIR2DL4Q99706 377 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 AP5S1Q9NUS5 200 aa5.47□□□□□ -1.53
USP16-202ENST00000399973 LINC00862A6NCI5 91 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 CCL25O15444 150 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 TNFRSF6BO95407 300 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 MT-ND4LP03901 98 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 INAFM2P0DMQ5 153 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 XCL1P47992 114 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
USP16-202ENST00000399973 SMIM2Q9BVW6 85 aa5.46□□□□□ -1.54
USP16-202ENST00000399973 FAT1Q14517 4588 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.45□□□□□ -1.54
USP16-202ENST00000399973 NPYP01303 97 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 SMAGPQ0VAQ4 97 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 ATP5L2Q7Z4Y8 100 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 C15orf56Q8N910 161 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 CLRN3Q8NCR9 226 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 ANAPC16Q96DE5 110 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 C20orf78Q9BR46 151 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 CHAC1Q9BUX1 264 aa5.45□□□□□ -1.54
USP16-202ENST00000399973 LINC00959A0A1B0GUT2 108 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 IFITM2Q01629 132 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 SS18Q15532 418 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 CFAP161Q6P656 301 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 Q6ZUT4 128 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
USP16-202ENST00000399973 ORMDL3Q8N138 153 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 ZNF664Q8N3J9 261 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 C9orf163Q8N9P6 203 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 CIRBP-AS1Q8TBR5 109 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 TMEM18Q96B42 140 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 PRELID3AQ96N28 172 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 UBE2D4Q9Y2X8 147 aa5.44□□□□□ -1.54
USP16-202ENST00000399973 IGHV3-64A0A075B6Q5 118 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 TCAPO15273 167 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 PPBPP02775 128 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 PLA2G1BP04054 148 aaKnown RBP5.43□□□□□ -1.54
USP16-202ENST00000399973 ADCYAP1P18509 176 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 CNBPP62633 177 aaKnown RBP5.43□□□□□ -1.54
USP16-202ENST00000399973 RPL39P62891 51 aaKnown RBP5.43□□□□□ -1.54
USP16-202ENST00000399973 FOXI1Q12951 378 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 COMMD7Q86VX2 200 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 CDC42SE2Q9NRR3 84 aa5.43□□□□□ -1.54
USP16-202ENST00000399973 VPS13BQ7Z7G8 4022 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 TRBV24-1A0A075B6N3 115 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 GVQW2A0A096LPI5 108 aaPredicted RBP5.42□□□□□ -1.54
USP16-202ENST00000399973 TRAV13-1A0A0B4J241 112 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 LOC389332A0A1B0GUA5 103 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 CHTF8P0CG12 524 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 RAB5AP20339 215 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 MALP21145 153 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 UQCC3Q6UW78 93 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 TMEM136Q6ZRR5 245 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 MAP1LC3AQ9H492 121 aa5.42□□□□□ -1.54
USP16-202ENST00000399973 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
USP16-202ENST00000399973 IGHV1-58A0A0C4DH39 117 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 TMEM218A2RU14 115 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 PANO1I0J062 215 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 PHOX2AO14813 284 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 SLPIP03973 132 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 RPL32P62910 135 aaKnown RBP5.41□□□□□ -1.54
USP16-202ENST00000399973 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
USP16-202ENST00000399973 SRRM2Q9UQ35 2752 aaKnown RBP5.4□□□□□ -1.54
USP16-202ENST00000399973 IGKV2-24A0A0C4DH68 120 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 C1orf196B1AJZ1 125 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 COX7A2LO14548 114 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 IFI27P40305 119 aaPredicted RBP5.4□□□□□ -1.54
USP16-202ENST00000399973 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 SDIM1Q6ZPB5 146 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 TIMM21Q9BVV7 248 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 CTDSP1Q9GZU7 261 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 SPANXA1Q9NS26 97 aa5.4□□□□□ -1.54
USP16-202ENST00000399973 CSDC2Q9Y534 153 aaKnown RBP5.4□□□□□ -1.54
USP16-202ENST00000399973 ZNF561-AS1K7EIQ3 104 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 S100PP25815 95 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 RPL37AP61513 92 aaKnown RBP5.39□□□□□ -1.55
USP16-202ENST00000399973 COX6A2Q02221 97 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 C5orf38Q86SI9 138 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 CARD19Q96LW7 228 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 OPRPNQ99935 248 aaPredicted RBP5.39□□□□□ -1.55
USP16-202ENST00000399973 SEC11CQ9BY50 192 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 LAMTOR2Q9Y2Q5 125 aa5.39□□□□□ -1.55
USP16-202ENST00000399973 FLG2Q5D862 2391 aaPredicted RBP5.38□□□□□ -1.55
USP16-202ENST00000399973 PRSS3P2Q8NHM4 247 aa5.38□□□□□ -1.55
USP16-202ENST00000399973 SPACA4Q8TDM5 124 aa5.38□□□□□ -1.55
USP16-202ENST00000399973 IMMP2LQ96T52 175 aa5.38□□□□□ -1.55
USP16-202ENST00000399973 IGLV4-69A0A075B6H9 119 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 A0A096LNI7 61 aa5.37□□□□□ -1.55
USP16-202ENST00000399973 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms