RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 BTF3L4Q96K17 158 aa11.63□□□□□ -0.55
FXN-203ENST00000396366 A0A087WYN8 130 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 TRBV27A0A0K0K1C4 114 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 LINC00959A0A1B0GUT2 108 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 COX6A2Q02221 97 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 RIGQ13278 110 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 ADIRFQ15847 76 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 SPACA4Q8TDM5 124 aa11.62□□□□□ -0.55
FXN-203ENST00000396366 CCL25O15444 150 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 FAM74A3Q4VXF1 159 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 NRACQ8N912 160 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 CDC42SE2Q9NRR3 84 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 NAT8BQ9UHF3 227 aa11.61□□□□□ -0.55
FXN-203ENST00000396366 GVQW2A0A096LPI5 108 aaPredicted RBP11.6□□□□□ -0.55
FXN-203ENST00000396366 OXTP01178 125 aa11.6□□□□□ -0.55
FXN-203ENST00000396366 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
FXN-203ENST00000396366 VCYO14598 125 aa11.59□□□□□ -0.55
FXN-203ENST00000396366 MRPL51Q4U2R6 128 aaKnown RBP11.59□□□□□ -0.55
FXN-203ENST00000396366 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
FXN-203ENST00000396366 ZNF664Q8N3J9 261 aa11.59□□□□□ -0.55
FXN-203ENST00000396366 SMIM27A0A1W2PRY6 76 aa11.58□□□□□ -0.56
FXN-203ENST00000396366 C7orf77A4D0Y5 90 aa11.58□□□□□ -0.56
FXN-203ENST00000396366 CAMPP49913 170 aa11.58□□□□□ -0.56
FXN-203ENST00000396366 IGKV2-24A0A0C4DH68 120 aa11.57□□□□□ -0.56
FXN-203ENST00000396366 SUMO2P61956 95 aaKnown RBP11.57□□□□□ -0.56
FXN-203ENST00000396366 PEA15Q15121 130 aa11.57□□□□□ -0.56
FXN-203ENST00000396366 FAM104BQ5XKR9 115 aa11.57□□□□□ -0.56
FXN-203ENST00000396366 HMCN2Q8NDA2 5059 aa11.57□□□□□ -0.56
FXN-203ENST00000396366 FCER1GP30273 86 aa11.56□□□□□ -0.56
FXN-203ENST00000396366 SS18Q15532 418 aa11.56□□□□□ -0.56
FXN-203ENST00000396366 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
FXN-203ENST00000396366 RNASE13Q5GAN3 156 aaKnown RBP11.56□□□□□ -0.56
FXN-203ENST00000396366 PLAC8Q9NZF1 115 aa11.56□□□□□ -0.56
FXN-203ENST00000396366 A0A096LNI7 61 aa11.54□□□□□ -0.56
FXN-203ENST00000396366 IGHV1-58A0A0C4DH39 117 aa11.54□□□□□ -0.56
FXN-203ENST00000396366 CD164L2Q6UWJ8 174 aa11.54□□□□□ -0.56
FXN-203ENST00000396366 UBE2D4Q9Y2X8 147 aa11.54□□□□□ -0.56
FXN-203ENST00000396366 PHOX2AO14813 284 aa11.53□□□□□ -0.56
FXN-203ENST00000396366 PPP1R17O96001 155 aa11.53□□□□□ -0.56
FXN-203ENST00000396366 MRPL54Q6P161 138 aaKnown RBP11.53□□□□□ -0.56
FXN-203ENST00000396366 CKS2P33552 79 aa11.52□□□□□ -0.57
FXN-203ENST00000396366 STPG4Q8N801 248 aa11.52□□□□□ -0.57
FXN-203ENST00000396366 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
FXN-203ENST00000396366 SMDT1Q9H4I9 107 aa11.51□□□□□ -0.57
FXN-203ENST00000396366 CSDC2Q9Y534 153 aaKnown RBP11.51□□□□□ -0.57
FXN-203ENST00000396366 TRBV24-1A0A075B6N3 115 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 LINC00862A6NCI5 91 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 TNFRSF6BO95407 300 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 Q6ZUT4 128 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 CARD19Q96LW7 228 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 C20orf78Q9BR46 151 aa11.5□□□□□ -0.57
FXN-203ENST00000396366 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 A0A1B0GW15 77 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 A0A1B0GXF2 115 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 C1orf196B1AJZ1 125 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 D6R8Y8 96 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 RPL39P62891 51 aaKnown RBP11.49□□□□□ -0.57
FXN-203ENST00000396366 SYCNQ0VAF6 134 aa11.49□□□□□ -0.57
FXN-203ENST00000396366 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
FXN-203ENST00000396366 FAM104AQ969W3 186 aa11.48□□□□□ -0.57
FXN-203ENST00000396366 IGLV4-69A0A075B6H9 119 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 COX7A2LO14548 114 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 NPYP01303 97 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 MT1HL1P0DM35 61 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 HBBP68871 147 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 Q6ZRU5 148 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 C7orf33Q8WU49 177 aa11.47□□□□□ -0.57
FXN-203ENST00000396366 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
FXN-203ENST00000396366 MALP21145 153 aa11.46□□□□□ -0.57
FXN-203ENST00000396366 RPL32P62910 135 aaKnown RBP11.46□□□□□ -0.57
FXN-203ENST00000396366 TIMM21Q9BVV7 248 aa11.46□□□□□ -0.57
FXN-203ENST00000396366 SMIM2Q9BVW6 85 aa11.46□□□□□ -0.57
FXN-203ENST00000396366 TCAPO15273 167 aa11.45□□□□□ -0.58
FXN-203ENST00000396366 SMAGPQ0VAQ4 97 aa11.45□□□□□ -0.58
FXN-203ENST00000396366 F8W036 122 aa11.44□□□□□ -0.58
FXN-203ENST00000396366 TMEM18Q96B42 140 aa11.44□□□□□ -0.58
FXN-203ENST00000396366 S100A8P05109 93 aa11.43□□□□□ -0.58
FXN-203ENST00000396366 PRR3P79522 188 aaKnown RBP11.43□□□□□ -0.58
FXN-203ENST00000396366 UBR4Q5T4S7 5183 aa11.43□□□□□ -0.58
FXN-203ENST00000396366 GAGE2BQ13066 116 aa11.42□□□□□ -0.58
FXN-203ENST00000396366 CAMK2N2Q96S95 79 aa11.42□□□□□ -0.58
FXN-203ENST00000396366 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
FXN-203ENST00000396366 TNXBP22105 4242 aa11.42□□□□□ -0.58
FXN-203ENST00000396366 PTTG1IPP53801 180 aa11.41□□□□□ -0.58
FXN-203ENST00000396366 A0A0J9YXV3 536 aa11.4□□□□□ -0.58
FXN-203ENST00000396366 PPBPP02775 128 aa11.4□□□□□ -0.58
FXN-203ENST00000396366 TMEM136Q6ZRR5 245 aa11.4□□□□□ -0.58
FXN-203ENST00000396366 PRELID3AQ96N28 172 aa11.4□□□□□ -0.58
FXN-203ENST00000396366 LOC107984640A0A0U1RRK4 108 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 A0A1W2PNN7 141 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 ORMDL3Q8N138 153 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 SPANXA1Q9NS26 97 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 PKIGQ9Y2B9 76 aa11.39□□□□□ -0.59
FXN-203ENST00000396366 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms