RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 EIF5AP63241 154 aaKnown RBP4.8□□□□□ -1.64
TRAV6-201ENST00000390428 C9orf62Q8N4C0 152 aa4.8□□□□□ -1.64
TRAV6-201ENST00000390428 GATD1Q8NB37 220 aa4.8□□□□□ -1.64
TRAV6-201ENST00000390428 CHCHD10Q8WYQ3 142 aaPredicted RBP4.8□□□□□ -1.64
TRAV6-201ENST00000390428 CNFNQ9BYD5 112 aa4.8□□□□□ -1.64
TRAV6-201ENST00000390428 TRBV20OR9-2A0A075B6H5 130 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 TRAV26-2A0A0B4J265 109 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 H7C423 109 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 TWIST1Q15672 202 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 RGS21Q2M5E4 152 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 AMMECR1LQ6DCA0 310 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 SPINK6Q6UWN8 80 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 LYPD6BQ8NI32 183 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 BIN3Q9NQY0 253 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
TRAV6-201ENST00000390428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.78□□□□□ -1.64
TRAV6-201ENST00000390428 IGKV2-29A2NJV5 120 aaPredicted RBP4.78□□□□□ -1.64
TRAV6-201ENST00000390428 PDE6DO43924 150 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 NCR2O95944 276 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 APCSP02743 223 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 FGF6P10767 208 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 KRTAP10-8P60410 259 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 MEF2BQ02080 365 aaPredicted RBP4.78□□□□□ -1.64
TRAV6-201ENST00000390428 RNASEKQ6P5S7 137 aaKnown RBP4.78□□□□□ -1.64
TRAV6-201ENST00000390428 OR5A1Q8NGJ0 315 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 RPL39LQ96EH5 51 aaKnown RBP4.78□□□□□ -1.64
TRAV6-201ENST00000390428 MED9Q9NWA0 146 aa4.78□□□□□ -1.64
TRAV6-201ENST00000390428 TEX46H3BTG2 121 aa4.77□□□□□ -1.65
TRAV6-201ENST00000390428 NPSP0C0P6 89 aa4.77□□□□□ -1.65
TRAV6-201ENST00000390428 ZNF25P17030 456 aaPredicted RBP4.77□□□□□ -1.65
TRAV6-201ENST00000390428 SRSF9Q13242 221 aaKnown RBP eCLIP4.77□□□□□ -1.65
TRAV6-201ENST00000390428 REG3GQ6UW15 175 aa4.77□□□□□ -1.65
TRAV6-201ENST00000390428 Q8N9P0 234 aaPredicted RBP4.77□□□□□ -1.65
TRAV6-201ENST00000390428 LINC00474Q9P2X8 69 aa4.77□□□□□ -1.65
TRAV6-201ENST00000390428 PKIGQ9Y2B9 76 aa4.77□□□□□ -1.65
TRAV6-201ENST00000390428 IGHV1-58A0A0C4DH39 117 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 LINC00959A0A1B0GUT2 108 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 FAM231BA6NCW3 169 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 SDHAF1A6NFY7 115 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 CCL25O15444 150 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 BCL2P10415 239 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 XCL1P47992 114 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 FOXA3P55318 350 aaPredicted RBP4.76□□□□□ -1.65
TRAV6-201ENST00000390428 TEX261Q6UWH6 196 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 Q6ZRP5 223 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 LINC00526Q96FQ7 95 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 CARD19Q96LW7 228 aa4.76□□□□□ -1.65
TRAV6-201ENST00000390428 RNASE7Q9H1E1 156 aaKnown RBP4.76□□□□□ -1.65
TRAV6-201ENST00000390428 RPP21Q9H633 154 aaKnown RBP4.76□□□□□ -1.65
TRAV6-201ENST00000390428 TRBV6-5A0A0K0K1A5 114 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 I3L3M4 83 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 K7EN84 100 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 ESDP10768 282 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 PMCHP20382 165 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 LCE1AQ5T7P2 110 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 EIF5AL1Q6IS14 154 aaKnown RBP4.75□□□□□ -1.65
TRAV6-201ENST00000390428 SMIM15Q7Z3B0 74 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 TMEM101Q96IK0 257 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 BTF3L4Q96K17 158 aa4.75□□□□□ -1.65
TRAV6-201ENST00000390428 SYCNQ0VAF6 134 aa4.74□□□□□ -1.65
TRAV6-201ENST00000390428 SS18Q15532 418 aa4.74□□□□□ -1.65
TRAV6-201ENST00000390428 CD164L2Q6UWJ8 174 aa4.74□□□□□ -1.65
TRAV6-201ENST00000390428 OCC1Q8TAD7 63 aa4.74□□□□□ -1.65
TRAV6-201ENST00000390428 CDC42SE2Q9NRR3 84 aa4.74□□□□□ -1.65
TRAV6-201ENST00000390428 GAS8-AS1O95177 125 aa4.73□□□□□ -1.65
TRAV6-201ENST00000390428 TSHBP01222 138 aa4.73□□□□□ -1.65
TRAV6-201ENST00000390428 TAGLN2P37802 199 aaKnown RBP4.73□□□□□ -1.65
TRAV6-201ENST00000390428 CAMPP49913 170 aa4.73□□□□□ -1.65
TRAV6-201ENST00000390428 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
TRAV6-201ENST00000390428 TMEM242Q9NWH2 141 aa4.73□□□□□ -1.65
TRAV6-201ENST00000390428 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 A0A1W2PNN7 141 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 A8MWL6 223 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 GATCO43716 136 aaKnown RBP4.72□□□□□ -1.65
TRAV6-201ENST00000390428 POLR2KP53803 58 aaKnown RBP4.72□□□□□ -1.65
TRAV6-201ENST00000390428 GAGE2BQ13066 116 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 FAM231DQ6ZW35 169 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 MRPL52Q86TS9 123 aaKnown RBP4.72□□□□□ -1.65
TRAV6-201ENST00000390428 ZNF664Q8N3J9 261 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 ISOC2Q96AB3 205 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 FAM210AQ96ND0 272 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 ST20Q9HBF5 79 aa4.72□□□□□ -1.65
TRAV6-201ENST00000390428 IGLV4-69A0A075B6H9 119 aa4.71□□□□□ -1.66
TRAV6-201ENST00000390428 TRBV27A0A0K0K1C4 114 aa4.71□□□□□ -1.66
TRAV6-201ENST00000390428 C7orf77A4D0Y5 90 aa4.71□□□□□ -1.66
TRAV6-201ENST00000390428 NUP35Q8NFH5 326 aa4.71□□□□□ -1.66
TRAV6-201ENST00000390428 PSORS1C2Q9UIG4 136 aa4.71□□□□□ -1.66
TRAV6-201ENST00000390428 C1orf196B1AJZ1 125 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 TMEM250H0YL14 139 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.7□□□□□ -1.66
TRAV6-201ENST00000390428 APOMO95445 188 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 RAB4AP20338 218 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 C9orf116Q5BN46 136 aaPredicted RBP4.7□□□□□ -1.66
TRAV6-201ENST00000390428 SLC51BQ86UW2 128 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 BORCS7Q96B45 105 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 TMEM191AQ9H0A3 160 aa4.7□□□□□ -1.66
TRAV6-201ENST00000390428 CSDC2Q9Y534 153 aaKnown RBP4.7□□□□□ -1.66
TRAV6-201ENST00000390428 A0A1B0GUT8 65 aa4.69□□□□□ -1.66
TRAV6-201ENST00000390428 HIGD1CA8MV81 97 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms