RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 LRRK2Q5S007 2527 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 IGHV3-66A0A0C4DH42 116 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 A0A0J9YXV3 536 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 HOXD3P31249 432 aaPredicted RBP6.89□□□□□ -1.31
PTPRA-204ENST00000380393 LYPD2Q6UXB3 125 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 C22orf34Q6ZV56 151 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
PTPRA-204ENST00000380393 NDUFB3O43676 98 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 ENHOQ6UWT2 76 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 IGHV4-4A0A075B6R2 117 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 BUB1B-PAK6H3BSN5 160 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 PRB1P04280 392 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 PVRIGQ6DKI7 326 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 SPG11Q96JI7 2443 aa6.88□□□□□ -1.31
PTPRA-204ENST00000380393 ATP5EP56381 51 aaPredicted RBP6.87□□□□□ -1.31
PTPRA-204ENST00000380393 Q9UF83 564 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 ANKHD1Q8IWZ3 2542 aaKnown RBP6.87□□□□□ -1.31
PTPRA-204ENST00000380393 PPP1R17O96001 155 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 C9orf129Q5T035 196 aaKnown RBP6.87□□□□□ -1.31
PTPRA-204ENST00000380393 IGHV3-49A0A0A0MS15 119 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 PRAC2D3DTV9 90 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 IGLV1-44P01699 117 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 BLCAPP62952 87 aa6.87□□□□□ -1.31
PTPRA-204ENST00000380393 A0A087WZ39 114 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 HRNRQ86YZ3 2850 aaPredicted RBP6.86□□□□□ -1.31
PTPRA-204ENST00000380393 SOCS3O14543 225 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 C6orf223Q8N319 242 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 TRAV13-2A0A0B4J235 113 aa6.86□□□□□ -1.31
PTPRA-204ENST00000380393 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
PTPRA-204ENST00000380393 I3L2K1 104 aa6.85□□□□□ -1.31
PTPRA-204ENST00000380393 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
PTPRA-204ENST00000380393 GPHB5Q86YW7 130 aa6.84□□□□□ -1.31
PTPRA-204ENST00000380393 PHLDA3Q9Y5J5 127 aa6.84□□□□□ -1.31
PTPRA-204ENST00000380393 NDUFC1O43677 76 aa6.84□□□□□ -1.31
PTPRA-204ENST00000380393 ATP5EP2Q5VTU8 51 aa6.84□□□□□ -1.31
PTPRA-204ENST00000380393 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.84□□□□□ -1.31
PTPRA-204ENST00000380393 MRPL53Q96EL3 112 aaKnown RBP6.84□□□□□ -1.31
PTPRA-204ENST00000380393 VCYO14598 125 aa6.84□□□□□ -1.31
PTPRA-204ENST00000380393 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
PTPRA-204ENST00000380393 CELSR2Q9HCU4 2923 aa6.84□□□□□ -1.32
PTPRA-204ENST00000380393 TEX22C9J3V5 150 aa6.83□□□□□ -1.32
PTPRA-204ENST00000380393 MRGPRG-AS1Q2M3A8 158 aa6.83□□□□□ -1.32
PTPRA-204ENST00000380393 K7EIM0 57 aa6.83□□□□□ -1.32
PTPRA-204ENST00000380393 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
PTPRA-204ENST00000380393 BBC3Q96PG8 261 aaPredicted RBP6.83□□□□□ -1.32
PTPRA-204ENST00000380393 NCR3O14931 201 aa6.83□□□□□ -1.32
PTPRA-204ENST00000380393 SORL1Q92673 2214 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 IGHV1-8P0DP01 117 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 ESRGQ1W209 222 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
PTPRA-204ENST00000380393 POLQO75417 2590 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 IGHV1-3A0A0C4DH29 117 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 IGHV1-58A0A0C4DH39 117 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 LYNX1G3V0Z9 82 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 LYNX1P0DP58 116 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 RNASE4P34096 147 aaKnown RBP6.82□□□□□ -1.32
PTPRA-204ENST00000380393 TMEM30BQ3MIR4 351 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 ZFAND3Q9H8U3 227 aa6.82□□□□□ -1.32
PTPRA-204ENST00000380393 F5H697 171 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
PTPRA-204ENST00000380393 APOC4P55056 127 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 UBE2E2Q96LR5 201 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 H3BS24 57 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 C9orf47Q6ZRZ4 202 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 IBA57-AS1B1ANH7 110 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 PIK3CD-AS1Q5SR53 167 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 LINC00308Q8TCZ7 52 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 LINC00574Q9H8X3 128 aa6.81□□□□□ -1.32
PTPRA-204ENST00000380393 IGLV3-9A0A075B6K5 115 aa6.8□□□□□ -1.32
PTPRA-204ENST00000380393 SMAD5-AS1Q9Y6J3 95 aa6.8□□□□□ -1.32
PTPRA-204ENST00000380393 MIFP14174 115 aa6.8□□□□□ -1.32
PTPRA-204ENST00000380393 HELZ2Q9BYK8 2649 aaKnown RBP6.8□□□□□ -1.32
PTPRA-204ENST00000380393 GNLYP22749 145 aa6.8□□□□□ -1.32
PTPRA-204ENST00000380393 NBPF19A0A087WUL8 3843 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 BCE1O60756 84 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 C15orf32Q32M92 178 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 LINC01560Q8TB33 94 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 FASNP49327 2511 aaKnown RBP6.79□□□□□ -1.32
PTPRA-204ENST00000380393 ABCA12Q86UK0 2595 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 CELSR1Q9NYQ6 3014 aa6.79□□□□□ -1.32
PTPRA-204ENST00000380393 IGKV3-7A0A075B6H7 116 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 TRAV10A0A0B4J240 114 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 IGLV4-3A0A075B6K6 122 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 SUMO4Q6EEV6 95 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 TM2D3Q9BRN9 247 aa6.78□□□□□ -1.32
PTPRA-204ENST00000380393 TRBV10-3A0A0K0K1G6 114 aa6.77□□□□□ -1.32
PTPRA-204ENST00000380393 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.32
PTPRA-204ENST00000380393 OBSCN-AS1Q96MR7 158 aa6.77□□□□□ -1.32
PTPRA-204ENST00000380393 UBL5Q9BZL1 73 aa6.77□□□□□ -1.32
PTPRA-204ENST00000380393 KTN1-AS1Q86SY8 53 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 OVOL2Q9BRP0 275 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 IGHV4OR15-8A0A075B7B6 117 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 A0A087WW49 117 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 A0A087WYN8 130 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms