RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 TMEM191AQ9H0A3 160 aa9.32□□□□□ -0.92
HDAC6-204ENST00000376643 C7orf77A4D0Y5 90 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 ESDP10768 282 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 CEBPGP53567 150 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 CD164L2Q6UWJ8 174 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 PRSS3P2Q8NHM4 247 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 CARD19Q96LW7 228 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 SMIM7Q9BQ49 75 aa9.31□□□□□ -0.92
HDAC6-204ENST00000376643 TRBV27A0A0K0K1C4 114 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 HIGD1CA8MV81 97 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 MT1HL1P0DM35 61 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 FCER1GP30273 86 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
HDAC6-204ENST00000376643 LYPD6BQ8NI32 183 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 EIF5A2Q9GZV4 153 aaKnown RBP9.3□□□□□ -0.92
HDAC6-204ENST00000376643 HMCN2Q8NDA2 5059 aa9.3□□□□□ -0.92
HDAC6-204ENST00000376643 VCYO14598 125 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 TSHBP01222 138 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 RIGQ13278 110 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 TMEM18Q96B42 140 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 OSTCQ9NRP0 149 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 CDC42SE2Q9NRR3 84 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 TMEM242Q9NWH2 141 aa9.29□□□□□ -0.92
HDAC6-204ENST00000376643 C1orf196B1AJZ1 125 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 PPP1R2P9O14990 202 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 MALP21145 153 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 SYCNQ0VAF6 134 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 REG3GQ6UW15 175 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 ALKAL2Q6UX46 152 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 LINC01551Q86U37 167 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 KIR2DL4Q99706 377 aa9.28□□□□□ -0.92
HDAC6-204ENST00000376643 CSDC2Q9Y534 153 aaKnown RBP9.28□□□□□ -0.92
HDAC6-204ENST00000376643 A0A096LNI7 61 aa9.27□□□□□ -0.93
HDAC6-204ENST00000376643 ZNF727A8MUV8 499 aa9.27□□□□□ -0.93
HDAC6-204ENST00000376643 TCAPO15273 167 aa9.27□□□□□ -0.93
HDAC6-204ENST00000376643 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
HDAC6-204ENST00000376643 SPINK6Q6UWN8 80 aa9.27□□□□□ -0.93
HDAC6-204ENST00000376643 PKHD1L1Q86WI1 4243 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 APOMO95445 188 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 RAB4AP20338 218 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 CAMPP49913 170 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 Q6ZRP5 223 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 LINC01600Q96MT4 127 aa9.26□□□□□ -0.93
HDAC6-204ENST00000376643 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
HDAC6-204ENST00000376643 COX7A2LO14548 114 aa9.25□□□□□ -0.93
HDAC6-204ENST00000376643 FAM74A3Q4VXF1 159 aa9.25□□□□□ -0.93
HDAC6-204ENST00000376643 IGLV4-69A0A075B6H9 119 aa9.24□□□□□ -0.93
HDAC6-204ENST00000376643 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
HDAC6-204ENST00000376643 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
HDAC6-204ENST00000376643 NAT8BQ9UHF3 227 aa9.24□□□□□ -0.93
HDAC6-204ENST00000376643 A0A1B0GW15 77 aa9.23□□□□□ -0.93
HDAC6-204ENST00000376643 PTTG1IPP53801 180 aa9.23□□□□□ -0.93
HDAC6-204ENST00000376643 LINC00862A6NCI5 91 aa9.22□□□□□ -0.93
HDAC6-204ENST00000376643 S100A8P05109 93 aa9.22□□□□□ -0.93
HDAC6-204ENST00000376643 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
HDAC6-204ENST00000376643 CAMK2N2Q96S95 79 aa9.22□□□□□ -0.93
HDAC6-204ENST00000376643 TIMM21Q9BVV7 248 aa9.22□□□□□ -0.93
HDAC6-204ENST00000376643 A0A0J9YXV3 536 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 F8WDY8 70 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 TMEM241Q24JQ0 296 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 NUP35Q8NFH5 326 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 C20orf78Q9BR46 151 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 UBE2D4Q9Y2X8 147 aa9.21□□□□□ -0.94
HDAC6-204ENST00000376643 GAS8-AS1O95177 125 aa9.2□□□□□ -0.94
HDAC6-204ENST00000376643 GAGE2BQ13066 116 aa9.2□□□□□ -0.94
HDAC6-204ENST00000376643 LINC00526Q96FQ7 95 aa9.2□□□□□ -0.94
HDAC6-204ENST00000376643 V9GYV3 84 aa9.2□□□□□ -0.94
HDAC6-204ENST00000376643 TRAV13-1A0A0B4J241 112 aa9.19□□□□□ -0.94
HDAC6-204ENST00000376643 SRP19P09132 144 aaKnown RBP9.19□□□□□ -0.94
HDAC6-204ENST00000376643 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
HDAC6-204ENST00000376643 NRACQ8N912 160 aa9.19□□□□□ -0.94
HDAC6-204ENST00000376643 OR10D4PQ8NGN7 298 aa9.19□□□□□ -0.94
HDAC6-204ENST00000376643 F8W036 122 aa9.18□□□□□ -0.94
HDAC6-204ENST00000376643 RNF151Q2KHN1 245 aa9.18□□□□□ -0.94
HDAC6-204ENST00000376643 FAM104BQ5XKR9 115 aa9.18□□□□□ -0.94
HDAC6-204ENST00000376643 TRBV24-1A0A075B6N3 115 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 SMKR1H3BMG3 65 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 CKS2P33552 79 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 SPAG11BQ08648 103 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 SMDT1Q9H4I9 107 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 SPANXA1Q9NS26 97 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 NAT8Q9UHE5 227 aa9.17□□□□□ -0.94
HDAC6-204ENST00000376643 IFITM2Q01629 132 aa9.16□□□□□ -0.94
HDAC6-204ENST00000376643 ADIRFQ15847 76 aa9.16□□□□□ -0.94
HDAC6-204ENST00000376643 MRPL51Q4U2R6 128 aaKnown RBP9.16□□□□□ -0.94
HDAC6-204ENST00000376643 IMMP2LQ96T52 175 aa9.16□□□□□ -0.94
HDAC6-204ENST00000376643 SMIM27A0A1W2PRY6 76 aa9.15□□□□□ -0.94
HDAC6-204ENST00000376643 PPBPP02775 128 aa9.15□□□□□ -0.94
HDAC6-204ENST00000376643 MT-ND6P03923 174 aa9.15□□□□□ -0.94
HDAC6-204ENST00000376643 RPL23P62829 140 aaKnown RBP9.15□□□□□ -0.94
HDAC6-204ENST00000376643 RPL18AQ02543 176 aaKnown RBP9.15□□□□□ -0.94
HDAC6-204ENST00000376643 SRSF9Q13242 221 aaKnown RBP eCLIP9.15□□□□□ -0.94
HDAC6-204ENST00000376643 PEA15Q15121 130 aa9.15□□□□□ -0.94
HDAC6-204ENST00000376643 Q6ZUT4 128 aa9.15□□□□□ -0.94
HDAC6-204ENST00000376643 HBBP68871 147 aa9.14□□□□□ -0.95
HDAC6-204ENST00000376643 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
HDAC6-204ENST00000376643 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
HDAC6-204ENST00000376643 SMIM2Q9BVW6 85 aa9.14□□□□□ -0.95
HDAC6-204ENST00000376643 MRPL35Q9NZE8 188 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms