RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 TRAV25A0A0B4J276 109 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1BA6NDE4 496 aaKnown RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1EA6NEQ0 496 aaKnown RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 E9PLD3 99 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 H3BMM0 161 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 K7EP34 96 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 CDK2AP2O75956 126 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 TSHBP01222 138 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1DP0C7P1 496 aaKnown RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1A1P0DJD3 496 aaKnown RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1CP0DJD4 496 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 FXYD2P54710 66 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 TCTAP57738 103 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 DEFB131AP59861 70 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 PMVKQ15126 192 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 RBMY1FQ15415 496 aaKnown RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 AMMECR1LQ6DCA0 310 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 MORN3Q6PF18 240 aaPredicted RBP3.44□□□□□ -1.86
USP48-202ENST00000374730 GTF2H5Q6ZYL4 71 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 TMEM61Q8N0U2 210 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 CEND1Q8N111 149 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 JPT2Q9H910 190 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 TP53TG1Q9Y2A0 90 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 TLN2Q9Y4G6 2542 aa3.44□□□□□ -1.86
USP48-202ENST00000374730 PDZD2O15018 2839 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 MYMXA0A1B0GTQ4 84 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 A0A1W2PPM0 123 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 C11orf86A6NJI1 115 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 KNCNA6PVL3 124 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 A8MWV9 139 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 H3BUT2 72 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 SMIM13P0DJ93 91 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 HERVK_113P61574 105 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 ZNF56Q15929 161 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 DEFB136Q30KP8 78 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 FAM74A4Q5TZK3 123 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 NEGR1Q7Z3B1 354 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 KLHL30-AS1Q8NEE0 82 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 OR5A1Q8NGJ0 315 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 DYNLRB2Q8TF09 96 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 PRADC1Q9BSG0 188 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 TTTY13Q9BZ97 58 aa3.43□□□□□ -1.86
USP48-202ENST00000374730 A0A1B0GWB2 263 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 I3L3M4 83 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 M0R2P5 195 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 SAP30O75446 220 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 INSP01308 110 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 CRYBA4P53673 196 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 RPL39P62891 51 aaKnown RBP3.42□□□□□ -1.86
USP48-202ENST00000374730 C20orf203Q8NBC4 194 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 DLX4Q92988 240 aaPredicted RBP3.42□□□□□ -1.86
USP48-202ENST00000374730 CST9LQ9H4G1 147 aa3.42□□□□□ -1.86
USP48-202ENST00000374730 A0A087WZ39 114 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 ZNF815PA8K554 130 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 P0DMU3 169 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 FABP2P12104 132 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 SEC61GP60059 68 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 C6orf226Q5I0X4 101 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 KRTAP5-1Q6L8H4 278 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 C11orf72Q8NBR9 251 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 WFDC11Q8NEX6 87 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 RAB37Q96AX2 223 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 DNAJC30Q96LL9 226 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 OPRPNQ99935 248 aaPredicted RBP3.41□□□□□ -1.86
USP48-202ENST00000374730 C16orf95Q9H693 158 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 SPANXB1Q9NS25 103 aaPredicted RBP3.41□□□□□ -1.86
USP48-202ENST00000374730 NHP2Q9NX24 153 aaKnown RBP3.41□□□□□ -1.86
USP48-202ENST00000374730 CBY1Q9Y3M2 126 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 PYGO1Q9Y3Y4 419 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 SPCS1Q9Y6A9 102 aa3.41□□□□□ -1.86
USP48-202ENST00000374730 SONP18583 2426 aaKnown RBP3.41□□□□□ -1.86
USP48-202ENST00000374730 IGLV4-3A0A075B6K6 122 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 A0A0J9YY99 117 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 IGLL5B9A064 214 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 K7ERJ3 54 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 RS1O15537 224 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 IGHV3-53P01767 116 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 UBE2D1P51668 147 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 CMC4P56277 68 aaPredicted RBP3.4□□□□□ -1.87
USP48-202ENST00000374730 RBX1P62877 108 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 RRN3P1Q2M238 152 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 OCIAD2Q56VL3 154 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 LCE3CQ5T5A8 94 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 CFAP126Q5VTH2 177 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 CCDC168Q8NDH2 2452 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 ZNRF2Q8NHG8 242 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 PLEKHB2Q96CS7 222 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 AMELXQ99217 191 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 ESM1Q9NQ30 184 aa3.4□□□□□ -1.87
USP48-202ENST00000374730 WNK1Q9H4A3 2382 aa3.39□□□□□ -1.87
USP48-202ENST00000374730 A0A087X002 238 aa3.39□□□□□ -1.87
USP48-202ENST00000374730 IGLV9-49A0A0B4J1Y8 123 aa3.39□□□□□ -1.87
USP48-202ENST00000374730 TMEM223A0PJW6 202 aa3.39□□□□□ -1.87
USP48-202ENST00000374730 KRTAP16-1A8MUX0 517 aa3.39□□□□□ -1.87
USP48-202ENST00000374730 J3QKU1 62 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms