RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 SYS1-DBNDD2H3BUS1 97 aa12.55□□□□□ -0.4
CDX4-201ENST00000373514 ATP5LO75964 103 aa12.55□□□□□ -0.4
CDX4-201ENST00000373514 TTC32Q5I0X7 151 aa12.55□□□□□ -0.4
CDX4-201ENST00000373514 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
CDX4-201ENST00000373514 H0Y8G0 127 aa12.54□□□□□ -0.4
CDX4-201ENST00000373514 LINC01556Q5JQF7 62 aa12.54□□□□□ -0.4
CDX4-201ENST00000373514 SPATA12Q7Z6I5 190 aa12.54□□□□□ -0.4
CDX4-201ENST00000373514 Q8N976 141 aa12.53□□□□□ -0.4
CDX4-201ENST00000373514 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
CDX4-201ENST00000373514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.52□□□□□ -0.4
CDX4-201ENST00000373514 PET117Q6UWS5 81 aa12.52□□□□□ -0.4
CDX4-201ENST00000373514 ERASQ7Z444 233 aa12.52□□□□□ -0.4
CDX4-201ENST00000373514 CHCHD5Q9BSY4 110 aa12.52□□□□□ -0.4
CDX4-201ENST00000373514 TRBV25-1A0A075B6N4 114 aa12.52□□□□□ -0.41
CDX4-201ENST00000373514 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.52□□□□□ -0.41
CDX4-201ENST00000373514 IGKV2-29A2NJV5 120 aaPredicted RBP12.52□□□□□ -0.41
CDX4-201ENST00000373514 IGIPA6NJ69 53 aa12.52□□□□□ -0.41
CDX4-201ENST00000373514 RTL8CO15255 209 aa12.52□□□□□ -0.41
CDX4-201ENST00000373514 LINC00518Q8N0U6 118 aa12.52□□□□□ -0.41
CDX4-201ENST00000373514 DNAH2Q9P225 4427 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 MPV17L2Q567V2 206 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 TMEM97Q5BJF2 176 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 C1orf134Q5TEV5 83 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 TIMM17AQ99595 171 aa12.51□□□□□ -0.41
CDX4-201ENST00000373514 PRSS1P07477 247 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 GAGE6Q13070 117 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 Q6ZN92 141 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 C6orf223Q8N319 242 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 TMEM141Q96I45 108 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 C12orf57Q99622 126 aa12.5□□□□□ -0.41
CDX4-201ENST00000373514 DNAH10Q8IVF4 4471 aa12.49□□□□□ -0.41
CDX4-201ENST00000373514 C20orf202A1L168 122 aa12.48□□□□□ -0.41
CDX4-201ENST00000373514 LINC01545Q5VT33 79 aa12.48□□□□□ -0.41
CDX4-201ENST00000373514 BAALCQ8WXS3 180 aa12.48□□□□□ -0.41
CDX4-201ENST00000373514 TMEM243Q9BU79 118 aa12.48□□□□□ -0.41
CDX4-201ENST00000373514 TMEM262E9PQX1 116 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 C10orf126Q8N4M7 172 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 UBE2D4Q9Y2X8 147 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 PYGO1Q9Y3Y4 419 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 TRAV9-2A0A087WT02 112 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 A0A087WX48 190 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 OPRPNQ99935 248 aaPredicted RBP12.47□□□□□ -0.41
CDX4-201ENST00000373514 PMCHL2Q9BQD1 86 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 SPANXA1Q9NS26 97 aa12.47□□□□□ -0.41
CDX4-201ENST00000373514 Q9HAA7 133 aa12.46□□□□□ -0.42
CDX4-201ENST00000373514 IGLV4-3A0A075B6K6 122 aa12.45□□□□□ -0.42
CDX4-201ENST00000373514 IBA57-AS1B1ANH7 110 aa12.45□□□□□ -0.42
CDX4-201ENST00000373514 UBE2L6O14933 153 aa12.45□□□□□ -0.42
CDX4-201ENST00000373514 ODF1Q14990 250 aa12.45□□□□□ -0.42
CDX4-201ENST00000373514 Q6ZRN7 208 aaPredicted RBP12.45□□□□□ -0.42
CDX4-201ENST00000373514 KLK12Q9UKR0 248 aa12.45□□□□□ -0.42
CDX4-201ENST00000373514 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 FGF6P10767 208 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 RBX1P62877 108 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 TEX43Q6ZNM6 134 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 ATOH7Q8N100 152 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 TIMM21Q9BVV7 248 aa12.44□□□□□ -0.42
CDX4-201ENST00000373514 H7C423 109 aa12.43□□□□□ -0.42
CDX4-201ENST00000373514 K7EP13 123 aa12.43□□□□□ -0.42
CDX4-201ENST00000373514 FAM104AQ969W3 186 aa12.43□□□□□ -0.42
CDX4-201ENST00000373514 IGLV4-60A0A075B6I1 120 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 PRSS29PA6NIE9 313 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 NPSP0C0P6 89 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 SMAGPQ0VAQ4 97 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 PMVKQ15126 192 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 CLPSL2Q6UWE3 100 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 MRPL52Q86TS9 123 aaKnown RBP12.42□□□□□ -0.42
CDX4-201ENST00000373514 ANGP03950 147 aaKnown RBP12.42□□□□□ -0.42
CDX4-201ENST00000373514 DGAT2L7PQ6IED9 249 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 CST9LQ9H4G1 147 aa12.42□□□□□ -0.42
CDX4-201ENST00000373514 S100A12P80511 92 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 TNP2Q05952 138 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 PAPPA-AS1Q5QFB9 102 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 Q6ZUT4 128 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 VCX2Q9H322 139 aa12.41□□□□□ -0.42
CDX4-201ENST00000373514 MRPL35Q9NZE8 188 aaKnown RBP12.41□□□□□ -0.42
CDX4-201ENST00000373514 CHTOPQ9Y3Y2 248 aaKnown RBP12.41□□□□□ -0.42
CDX4-201ENST00000373514 DNAH17Q9UFH2 4485 aa12.4□□□□□ -0.42
CDX4-201ENST00000373514 FAT2Q9NYQ8 4349 aa12.4□□□□□ -0.42
CDX4-201ENST00000373514 PKIAP61925 76 aa12.4□□□□□ -0.42
CDX4-201ENST00000373514 MRPS36P82909 103 aaKnown RBP12.4□□□□□ -0.42
CDX4-201ENST00000373514 RNASE13Q5GAN3 156 aaKnown RBP12.4□□□□□ -0.42
CDX4-201ENST00000373514 CSDC2Q9Y534 153 aaKnown RBP12.4□□□□□ -0.42
CDX4-201ENST00000373514 F8VRH5 84 aa12.39□□□□□ -0.43
CDX4-201ENST00000373514 OR5A1Q8NGJ0 315 aa12.39□□□□□ -0.43
CDX4-201ENST00000373514 UBE2WQ96B02 151 aa12.39□□□□□ -0.43
CDX4-201ENST00000373514 AMELXQ99217 191 aa12.39□□□□□ -0.43
CDX4-201ENST00000373514 DPM2O94777 84 aa12.38□□□□□ -0.43
CDX4-201ENST00000373514 ZNF25P17030 456 aaPredicted RBP12.38□□□□□ -0.43
CDX4-201ENST00000373514 ENHOQ6UWT2 76 aa12.38□□□□□ -0.43
CDX4-201ENST00000373514 LINC00336Q6ZUF6 198 aa12.38□□□□□ -0.43
CDX4-201ENST00000373514 TMEM101Q96IK0 257 aa12.38□□□□□ -0.43
CDX4-201ENST00000373514 VAMP8Q9BV40 100 aa12.38□□□□□ -0.43
CDX4-201ENST00000373514 IGKCP01834 107 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 MAJINQ3KP22 176 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 LINC00269Q8N2A0 174 aa12.37□□□□□ -0.43
CDX4-201ENST00000373514 A0A1B0GUV1 79 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms