RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 A6NJY4 79 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 K7EQD1 137 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 LEPROTO15243 131 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 MRPS36P82909 103 aaKnown RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 CASC10Q5T4H9 136 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 PLEKHB2Q96CS7 222 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 OVOL2Q9BRP0 275 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 SPANXB1Q9NS25 103 aaPredicted RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 HUWE1Q7Z6Z7 4374 aaKnown RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 ZNF22P17026 224 aaPredicted RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 LGALS3P17931 250 aaKnown RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 EMP1P54849 157 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 RRN3P1Q2M238 152 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 DAZ4Q86SG3 579 aaKnown RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 CSNK1G2-AS1Q8NCQ2 148 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 DAZ3Q9NR90 486 aaKnown RBP10.05□□□□□ -0.8
LDB3-204ENST00000372066 UBE2D4Q9Y2X8 147 aa10.05□□□□□ -0.8
LDB3-204ENST00000372066 H3BUT2 72 aa10.04□□□□□ -0.8
LDB3-204ENST00000372066 J3QQQ9 107 aa10.04□□□□□ -0.8
LDB3-204ENST00000372066 A0A1B0GWB2 263 aa10.03□□□□□ -0.8
LDB3-204ENST00000372066 A0A1W2PPM0 123 aa10.03□□□□□ -0.8
LDB3-204ENST00000372066 GAGE10A6NGK3 116 aa10.03□□□□□ -0.8
LDB3-204ENST00000372066 RPL35AP18077 110 aaKnown RBP10.03□□□□□ -0.8
LDB3-204ENST00000372066 Q6ZTI0 123 aa10.03□□□□□ -0.8
LDB3-204ENST00000372066 PHLDA1Q8WV24 401 aaPredicted RBP10.03□□□□□ -0.8
LDB3-204ENST00000372066 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
LDB3-204ENST00000372066 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
LDB3-204ENST00000372066 STAB2Q8WWQ8 2551 aa10.02□□□□□ -0.8
LDB3-204ENST00000372066 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 PLAC8L1A1L4L8 177 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 K7EP34 96 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 OR5A1Q8NGJ0 315 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 ZNF479Q96JC4 524 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 WFDC10AQ9H1F0 79 aa10.02□□□□□ -0.81
LDB3-204ENST00000372066 A0A0J9YXV3 536 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 A0A0J9YY99 117 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 K7ERU9 68 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 FABP2P12104 132 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 RAB37Q96AX2 223 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 NOP10Q9NPE3 64 aaKnown RBP10.01□□□□□ -0.81
LDB3-204ENST00000372066 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
LDB3-204ENST00000372066 TRBV6-4A0A1B0GX49 114 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 UBE2D3P61077 147 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 UBE2D2P62837 147 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 C12orf74Q32Q52 190 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 OCIAD2Q56VL3 154 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 FAM104AQ969W3 186 aa10.01□□□□□ -0.81
LDB3-204ENST00000372066 DYNC2H1Q8NCM8 4307 aaKnown RBP10□□□□□ -0.81
LDB3-204ENST00000372066 PCP4P48539 62 aa10□□□□□ -0.81
LDB3-204ENST00000372066 SRSF9Q13242 221 aaKnown RBP eCLIP10□□□□□ -0.81
LDB3-204ENST00000372066 GTSF1LQ9H1H1 148 aa10□□□□□ -0.81
LDB3-204ENST00000372066 Q9UF83 564 aa10□□□□□ -0.81
LDB3-204ENST00000372066 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
LDB3-204ENST00000372066 TRGV2A0A075B6R0 118 aa9.99□□□□□ -0.81
LDB3-204ENST00000372066 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.99□□□□□ -0.81
LDB3-204ENST00000372066 IGKV2-29A2NJV5 120 aaPredicted RBP9.99□□□□□ -0.81
LDB3-204ENST00000372066 TSPEAR-AS2P59090 65 aa9.99□□□□□ -0.81
LDB3-204ENST00000372066 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
LDB3-204ENST00000372066 RYR2Q92736 4967 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 IGHV3-38A0A0C4DH36 116 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 GAGE12BA1L429 117 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 SMIM9A6NGZ8 99 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 TIRAPP58753 221 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 Q6ZUT4 128 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
LDB3-204ENST00000372066 SACSQ9NZJ4 4579 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 H7C423 109 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 FAM19A3Q7Z5A8 133 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 KIR2DL5BQ8NHK3 375 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 IGLV5-45A0A087WSX0 123 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 IGLL5B9A064 214 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 K7ERJ3 54 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 GAGE7O76087 117 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 UBE2D1P51668 147 aa9.97□□□□□ -0.81
LDB3-204ENST00000372066 TMEM238C9JI98 176 aa9.96□□□□□ -0.82
LDB3-204ENST00000372066 IGHV3-30-3P0DP02 117 aa9.96□□□□□ -0.82
LDB3-204ENST00000372066 CEMP1Q6PRD7 247 aaPredicted RBP9.96□□□□□ -0.82
LDB3-204ENST00000372066 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.82
LDB3-204ENST00000372066 DNAH7Q8WXX0 4024 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 TRGV4A0A0C4DH28 118 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 LCE6AA0A183 80 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 IGHV4-30-4P0DP06 118 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 LINC00612Q8N6U2 182 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 TM2D3Q9BRN9 247 aa9.95□□□□□ -0.82
LDB3-204ENST00000372066 GAGE12JA6NER3 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 HERVK_113P63121 156 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 GAGE4Q13068 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 GAGE5Q13069 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
LDB3-204ENST00000372066 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms