RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 G0S2P27469 103 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 GAGE1Q13065 139 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 GAGE4Q13068 117 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 GAGE5Q13069 117 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 GAGE13Q4V321 117 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 FAM222AQ5U5X8 452 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 ERASQ7Z444 233 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 C14orf144Q96I85 54 aa6.96□□□□□ -1.3
TPM3-210ENST00000368530 A0A087WX48 190 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 LOC100131303A0A0U1RQF7 123 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 IGLC3P0DOY3 106 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 RPL36AP83881 106 aaKnown RBP6.95□□□□□ -1.3
TPM3-210ENST00000368530 ZC2HC1BQ5TFG8 222 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 STPG4Q8N801 248 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 C20orf203Q8NBC4 194 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 BAALCQ8WXS3 180 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 RPL36ALQ969Q0 106 aaKnown RBP6.95□□□□□ -1.3
TPM3-210ENST00000368530 MIEN1Q9BRT3 115 aa6.95□□□□□ -1.3
TPM3-210ENST00000368530 MRPL35Q9NZE8 188 aaKnown RBP6.95□□□□□ -1.3
TPM3-210ENST00000368530 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 DEFB131BA0A096LNP1 70 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 PRSS29PA6NIE9 313 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 IGIPA6NJ69 53 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 DPM2O94777 84 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 IGKCP01834 107 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 COTL1Q14019 142 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 FHL2Q14192 279 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 OPRPNQ99935 248 aaPredicted RBP6.94□□□□□ -1.3
TPM3-210ENST00000368530 TP73-AS1Q9UF72 201 aa6.94□□□□□ -1.3
TPM3-210ENST00000368530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.93□□□□□ -1.3
TPM3-210ENST00000368530 TRAV12-1A0A0B4J245 112 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 TRBV10-1A0A0K0K1A3 114 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 IGKV2-29A2NJV5 120 aaPredicted RBP6.93□□□□□ -1.3
TPM3-210ENST00000368530 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 Q6ZR54 194 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 LINC00612Q8N6U2 182 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 CHCHD7Q9BUK0 85 aa6.93□□□□□ -1.3
TPM3-210ENST00000368530 CHTOPQ9Y3Y2 248 aaKnown RBP6.93□□□□□ -1.3
TPM3-210ENST00000368530 LYRM9A8MSI8 78 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 M0R2N4 97 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 TMEM141Q96I45 108 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 TIMM17AQ99595 171 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 UQCR10Q9UDW1 63 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 HSPG2P98160 4391 aa6.92□□□□□ -1.3
TPM3-210ENST00000368530 TRBV6-4A0A1B0GX49 114 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 LINC01549A6NIU2 74 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 CIDEAO60543 219 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 UBE2D3P61077 147 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 UBE2D2P62837 147 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 PRADC1Q9BSG0 188 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 F8VRH5 84 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 DAD1P61803 113 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 PMVKQ15126 192 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 RNASE13Q5GAN3 156 aaKnown RBP6.91□□□□□ -1.3
TPM3-210ENST00000368530 DAZ4Q86SG3 579 aaKnown RBP6.91□□□□□ -1.3
TPM3-210ENST00000368530 CST9LQ9H4G1 147 aa6.91□□□□□ -1.3
TPM3-210ENST00000368530 DAZ3Q9NR90 486 aaKnown RBP6.91□□□□□ -1.3
TPM3-210ENST00000368530 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.31
TPM3-210ENST00000368530 PLNP26678 52 aa6.9□□□□□ -1.31
TPM3-210ENST00000368530 NMUP48645 174 aa6.9□□□□□ -1.31
TPM3-210ENST00000368530 HNRNPA3P51991 378 aaKnown RBP6.9□□□□□ -1.31
TPM3-210ENST00000368530 HHLA3Q9XRX5 114 aa6.9□□□□□ -1.31
TPM3-210ENST00000368530 GYPEP15421 78 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 HTN3P15516 51 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 CTAG1AP78358 180 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 SLC25A34Q6PIV7 304 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 NTM-AS1Q6ZSK4 140 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 VCX2Q9H322 139 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
TPM3-210ENST00000368530 IGLV4-69A0A075B6H9 119 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 IGKV2D-26A0A0A0MRZ7 120 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 A0A0J9YY99 117 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 SPART-AS1P0CW21 52 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 COX8AP10176 69 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 CRYBA4P53673 196 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 Q6ZUT4 128 aa6.88□□□□□ -1.31
TPM3-210ENST00000368530 A0A096LPF7 62 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 C11orf86A6NJI1 115 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 PAX4O43316 350 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 LINC00694P0DN24 101 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 PCP2Q8IVA1 136 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 FAM104AQ969W3 186 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 TTTY13Q9BZ97 58 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 SPANXA1Q9NS26 97 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 PYGO1Q9Y3Y4 419 aa6.87□□□□□ -1.31
TPM3-210ENST00000368530 LRP1BQ9NZR2 4599 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 F5H768 121 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 ATP5G1P05496 136 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 BATFQ16520 125 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 DGAT2L7PQ6IED9 249 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 TMEM243Q9BU79 118 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 TRBV25-1A0A075B6N4 114 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 A0A0J9YXV3 536 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 UBE2L6O14933 153 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 FGF6P10767 208 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 ATP6V0E2Q8NHE4 81 aa6.86□□□□□ -1.31
TPM3-210ENST00000368530 CHAC1Q9BUX1 264 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms