RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
CKS1B-202ENST00000368436 CDC42SE2Q9NRR3 84 aa10.01□□□□□ -0.81
CKS1B-202ENST00000368436 LINC00474Q9P2X8 69 aa10.01□□□□□ -0.81
CKS1B-202ENST00000368436 BLOC1S1P78537 153 aa10□□□□□ -0.81
CKS1B-202ENST00000368436 MRPL52Q86TS9 123 aaKnown RBP10□□□□□ -0.81
CKS1B-202ENST00000368436 MRAP2Q96G30 205 aa10□□□□□ -0.81
CKS1B-202ENST00000368436 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
CKS1B-202ENST00000368436 TMEM242Q9NWH2 141 aa10□□□□□ -0.81
CKS1B-202ENST00000368436 PKIGQ9Y2B9 76 aa10□□□□□ -0.81
CKS1B-202ENST00000368436 SS18Q15532 418 aa9.99□□□□□ -0.81
CKS1B-202ENST00000368436 CD164L2Q6UWJ8 174 aa9.99□□□□□ -0.81
CKS1B-202ENST00000368436 BORCS7Q96B45 105 aa9.99□□□□□ -0.81
CKS1B-202ENST00000368436 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
CKS1B-202ENST00000368436 TRBV27A0A0K0K1C4 114 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 A0A1B0GUT8 65 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 RAB4AP20338 218 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 ZNF664Q8N3J9 261 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 CARD19Q96LW7 228 aa9.98□□□□□ -0.81
CKS1B-202ENST00000368436 HIGD1CA8MV81 97 aa9.97□□□□□ -0.81
CKS1B-202ENST00000368436 SPINK6Q6UWN8 80 aa9.97□□□□□ -0.81
CKS1B-202ENST00000368436 ALKAL2Q6UX46 152 aa9.97□□□□□ -0.81
CKS1B-202ENST00000368436 A0A0J9YXV3 536 aa9.96□□□□□ -0.82
CKS1B-202ENST00000368436 ZNF561-AS1K7EIQ3 104 aa9.96□□□□□ -0.82
CKS1B-202ENST00000368436 SYCNQ0VAF6 134 aa9.96□□□□□ -0.82
CKS1B-202ENST00000368436 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
CKS1B-202ENST00000368436 LINC01551Q86U37 167 aa9.96□□□□□ -0.82
CKS1B-202ENST00000368436 C7orf77A4D0Y5 90 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 CEBPGP53567 150 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 KRTAP10-8P60410 259 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 AMN1Q8IY45 258 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 SMIM7Q9BQ49 75 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 OSTCQ9NRP0 149 aa9.95□□□□□ -0.82
CKS1B-202ENST00000368436 VCYO14598 125 aa9.94□□□□□ -0.82
CKS1B-202ENST00000368436 CAMPP49913 170 aa9.94□□□□□ -0.82
CKS1B-202ENST00000368436 CSDC2Q9Y534 153 aaKnown RBP9.94□□□□□ -0.82
CKS1B-202ENST00000368436 LCE2BO14633 110 aa9.93□□□□□ -0.82
CKS1B-202ENST00000368436 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
CKS1B-202ENST00000368436 Q6ZRP5 223 aa9.93□□□□□ -0.82
CKS1B-202ENST00000368436 LRP2P98164 4655 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 IGLV4-69A0A075B6H9 119 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 ZNF727A8MUV8 499 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 NRACQ8N912 160 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 ISOC2Q96AB3 205 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 EIF5A2Q9GZV4 153 aaKnown RBP9.92□□□□□ -0.82
CKS1B-202ENST00000368436 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 V9GYV3 84 aa9.92□□□□□ -0.82
CKS1B-202ENST00000368436 LOC107984640A0A0U1RRK4 108 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 SMKR1H3BMG3 65 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 PPP1R17O96001 155 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 FCER1GP30273 86 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 RIGQ13278 110 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 ODF1Q14990 250 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 AKAP14Q86UN6 197 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 NUP35Q8NFH5 326 aa9.91□□□□□ -0.82
CKS1B-202ENST00000368436 COX7A2LO14548 114 aa9.9□□□□□ -0.82
CKS1B-202ENST00000368436 SRP19P09132 144 aaKnown RBP9.9□□□□□ -0.82
CKS1B-202ENST00000368436 SUMO2P61956 95 aaKnown RBP9.9□□□□□ -0.82
CKS1B-202ENST00000368436 SMAGPQ0VAQ4 97 aa9.9□□□□□ -0.82
CKS1B-202ENST00000368436 A0A1W2PNN7 141 aa9.89□□□□□ -0.83
CKS1B-202ENST00000368436 MALP21145 153 aa9.89□□□□□ -0.83
CKS1B-202ENST00000368436 GAGE2BQ13066 116 aa9.89□□□□□ -0.83
CKS1B-202ENST00000368436 C2orf48Q96LS8 159 aa9.89□□□□□ -0.83
CKS1B-202ENST00000368436 RNASE13Q5GAN3 156 aaKnown RBP9.88□□□□□ -0.83
CKS1B-202ENST00000368436 CAMK2N2Q96S95 79 aa9.88□□□□□ -0.83
CKS1B-202ENST00000368436 KIR2DL4Q99706 377 aa9.88□□□□□ -0.83
CKS1B-202ENST00000368436 TIMM21Q9BVV7 248 aa9.88□□□□□ -0.83
CKS1B-202ENST00000368436 PPP1R2P9O14990 202 aa9.87□□□□□ -0.83
CKS1B-202ENST00000368436 APOMO95445 188 aa9.87□□□□□ -0.83
CKS1B-202ENST00000368436 NAT8BQ9UHF3 227 aa9.87□□□□□ -0.83
CKS1B-202ENST00000368436 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
CKS1B-202ENST00000368436 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.86□□□□□ -0.83
CKS1B-202ENST00000368436 MRPL51Q4U2R6 128 aaKnown RBP9.86□□□□□ -0.83
CKS1B-202ENST00000368436 FAM104BQ5XKR9 115 aa9.86□□□□□ -0.83
CKS1B-202ENST00000368436 Q6ZUT4 128 aa9.86□□□□□ -0.83
CKS1B-202ENST00000368436 C5orf38Q86SI9 138 aa9.86□□□□□ -0.83
CKS1B-202ENST00000368436 TRBV24-1A0A075B6N3 115 aa9.85□□□□□ -0.83
CKS1B-202ENST00000368436 RPL23P62829 140 aaKnown RBP9.85□□□□□ -0.83
CKS1B-202ENST00000368436 TMEM241Q24JQ0 296 aa9.85□□□□□ -0.83
CKS1B-202ENST00000368436 C9orf116Q5BN46 136 aaPredicted RBP9.85□□□□□ -0.83
CKS1B-202ENST00000368436 TMEM18Q96B42 140 aa9.85□□□□□ -0.83
CKS1B-202ENST00000368436 C20orf78Q9BR46 151 aa9.85□□□□□ -0.83
CKS1B-202ENST00000368436 LINC00862A6NCI5 91 aa9.84□□□□□ -0.83
CKS1B-202ENST00000368436 RPL32P62910 135 aaKnown RBP9.84□□□□□ -0.83
CKS1B-202ENST00000368436 RNF151Q2KHN1 245 aa9.84□□□□□ -0.83
CKS1B-202ENST00000368436 FAM74A3Q4VXF1 159 aa9.84□□□□□ -0.83
CKS1B-202ENST00000368436 PSORS1C2Q9UIG4 136 aa9.84□□□□□ -0.83
CKS1B-202ENST00000368436 SMIM27A0A1W2PRY6 76 aa9.83□□□□□ -0.84
CKS1B-202ENST00000368436 SPAG11BQ08648 103 aa9.83□□□□□ -0.84
CKS1B-202ENST00000368436 FAM104AQ969W3 186 aa9.83□□□□□ -0.84
CKS1B-202ENST00000368436 hCG_2014768A0A024R1R8 64 aa9.82□□□□□ -0.84
CKS1B-202ENST00000368436 TCAPO15273 167 aa9.82□□□□□ -0.84
CKS1B-202ENST00000368436 OR10D4PQ8NGN7 298 aa9.82□□□□□ -0.84
CKS1B-202ENST00000368436 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
CKS1B-202ENST00000368436 A0A1B0GW15 77 aa9.81□□□□□ -0.84
CKS1B-202ENST00000368436 F8WDY8 70 aa9.81□□□□□ -0.84
CKS1B-202ENST00000368436 CKS2P33552 79 aa9.81□□□□□ -0.84
CKS1B-202ENST00000368436 RPL18AQ02543 176 aaKnown RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms