RNA–Protein interactions for RNA: ENST00000366816.5

H3F3A-204, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3A, Length 799 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-204ENST00000366816 FAM30AQ9NZY2 134 aa12.99□□□□□ -0.33
H3F3A-204ENST00000366816 GAGE12HA6NDE8 117 aa12.98□□□□□ -0.33
H3F3A-204ENST00000366816 RPL32P62910 135 aaKnown RBP12.98□□□□□ -0.33
H3F3A-204ENST00000366816 C14orf177Q52M58 125 aa12.98□□□□□ -0.33
H3F3A-204ENST00000366816 MRPL52Q86TS9 123 aaKnown RBP12.98□□□□□ -0.33
H3F3A-204ENST00000366816 CDC42SE2Q9NRR3 84 aa12.98□□□□□ -0.33
H3F3A-204ENST00000366816 PHOX2AO14813 284 aa12.97□□□□□ -0.33
H3F3A-204ENST00000366816 TCAPO15273 167 aa12.97□□□□□ -0.33
H3F3A-204ENST00000366816 CHCHD10Q8WYQ3 142 aaPredicted RBP12.97□□□□□ -0.33
H3F3A-204ENST00000366816 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
H3F3A-204ENST00000366816 ZNF664Q8N3J9 261 aa12.96□□□□□ -0.33
H3F3A-204ENST00000366816 CARHSP1Q9Y2V2 147 aaKnown RBP12.96□□□□□ -0.33
H3F3A-204ENST00000366816 UBE2D4Q9Y2X8 147 aa12.96□□□□□ -0.33
H3F3A-204ENST00000366816 LOC389332A0A1B0GUA5 103 aa12.95□□□□□ -0.34
H3F3A-204ENST00000366816 RNASE13Q5GAN3 156 aaKnown RBP12.95□□□□□ -0.34
H3F3A-204ENST00000366816 LINC00959A0A1B0GUT2 108 aa12.94□□□□□ -0.34
H3F3A-204ENST00000366816 RPL39P62891 51 aaKnown RBP12.94□□□□□ -0.34
H3F3A-204ENST00000366816 CLRN3Q8NCR9 226 aa12.94□□□□□ -0.34
H3F3A-204ENST00000366816 DNAH8Q96JB1 4490 aa12.93□□□□□ -0.34
H3F3A-204ENST00000366816 XCL1P47992 114 aa12.93□□□□□ -0.34
H3F3A-204ENST00000366816 Q8N1X5 172 aa12.93□□□□□ -0.34
H3F3A-204ENST00000366816 RPS10P5Q9NQ39 176 aa12.93□□□□□ -0.34
H3F3A-204ENST00000366816 hDV102S1A0JD36 115 aa12.92□□□□□ -0.34
H3F3A-204ENST00000366816 CCL25O15444 150 aa12.91□□□□□ -0.34
H3F3A-204ENST00000366816 SMR3BP02814 79 aaPredicted RBP12.91□□□□□ -0.34
H3F3A-204ENST00000366816 S100PP25815 95 aa12.91□□□□□ -0.34
H3F3A-204ENST00000366816 FOXI1Q12951 378 aa12.91□□□□□ -0.34
H3F3A-204ENST00000366816 KIAA1644Q3SXP7 199 aa12.91□□□□□ -0.34
H3F3A-204ENST00000366816 TMEM18Q96B42 140 aa12.91□□□□□ -0.34
H3F3A-204ENST00000366816 CSDC2Q9Y534 153 aaKnown RBP12.91□□□□□ -0.34
H3F3A-204ENST00000366816 TRAV9-1A0A075B6T8 112 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 APOC3P02656 99 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 RAB5AP20339 215 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 RHEBQ15382 184 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 Q6ZUT4 128 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 C15orf56Q8N910 161 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 MAP1LC3AQ9H492 121 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 LAMTOR2Q9Y2Q5 125 aa12.9□□□□□ -0.34
H3F3A-204ENST00000366816 PRSS47A8MTI9 375 aa12.89□□□□□ -0.35
H3F3A-204ENST00000366816 SS18Q15532 418 aa12.89□□□□□ -0.35
H3F3A-204ENST00000366816 OPRPNQ99935 248 aaPredicted RBP12.89□□□□□ -0.35
H3F3A-204ENST00000366816 TIMM21Q9BVV7 248 aa12.89□□□□□ -0.35
H3F3A-204ENST00000366816 PCLOQ9Y6V0 5065 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 SLPIP03973 132 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 SMAGPQ0VAQ4 97 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 HIGD2BQ4VC39 106 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 Q6ZSA8 131 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 FAM104AQ969W3 186 aa12.88□□□□□ -0.35
H3F3A-204ENST00000366816 TRAV13-1A0A0B4J241 112 aa12.87□□□□□ -0.35
H3F3A-204ENST00000366816 ABCA13Q86UQ4 5058 aa12.86□□□□□ -0.35
H3F3A-204ENST00000366816 CFAP161Q6P656 301 aa12.86□□□□□ -0.35
H3F3A-204ENST00000366816 Q8N8P6 123 aa12.86□□□□□ -0.35
H3F3A-204ENST00000366816 C9orf163Q8N9P6 203 aa12.86□□□□□ -0.35
H3F3A-204ENST00000366816 GNB1LQ9BYB4 327 aa12.85□□□□□ -0.35
H3F3A-204ENST00000366816 SPANXA1Q9NS26 97 aa12.85□□□□□ -0.35
H3F3A-204ENST00000366816 IFI27P40305 119 aaPredicted RBP12.84□□□□□ -0.35
H3F3A-204ENST00000366816 CNBPP62633 177 aaKnown RBP12.84□□□□□ -0.35
H3F3A-204ENST00000366816 CD164L2Q6UWJ8 174 aa12.84□□□□□ -0.35
H3F3A-204ENST00000366816 AP5S1Q9NUS5 200 aa12.84□□□□□ -0.35
H3F3A-204ENST00000366816 C1orf196B1AJZ1 125 aa12.83□□□□□ -0.36
H3F3A-204ENST00000366816 FAT1Q14517 4588 aa12.83□□□□□ -0.36
H3F3A-204ENST00000366816 TGIF2-C20orf24A0A0A6YYL0 155 aa12.82□□□□□ -0.36
H3F3A-204ENST00000366816 EPM2AB3EWF7 344 aa12.82□□□□□ -0.36
H3F3A-204ENST00000366816 NDUFA5Q16718 116 aa12.82□□□□□ -0.36
H3F3A-204ENST00000366816 SVBPQ8N300 66 aa12.82□□□□□ -0.36
H3F3A-204ENST00000366816 LINC00526Q96FQ7 95 aa12.82□□□□□ -0.36
H3F3A-204ENST00000366816 SNAPINO95295 136 aa12.81□□□□□ -0.36
H3F3A-204ENST00000366816 MRPS36P82909 103 aaKnown RBP12.81□□□□□ -0.36
H3F3A-204ENST00000366816 SDIM1Q6ZPB5 146 aa12.81□□□□□ -0.36
H3F3A-204ENST00000366816 SCXQ7RTU7 201 aa12.81□□□□□ -0.36
H3F3A-204ENST00000366816 GVQW2A0A096LPI5 108 aaPredicted RBP12.8□□□□□ -0.36
H3F3A-204ENST00000366816 Q5VSD8 79 aa12.8□□□□□ -0.36
H3F3A-204ENST00000366816 C2orf66Q6UXQ4 117 aa12.8□□□□□ -0.36
H3F3A-204ENST00000366816 ALKBH7Q9BT30 221 aaPredicted RBP12.8□□□□□ -0.36
H3F3A-204ENST00000366816 CHAC1Q9BUX1 264 aa12.8□□□□□ -0.36
H3F3A-204ENST00000366816 MRPL18Q9H0U6 180 aaKnown RBP12.8□□□□□ -0.36
H3F3A-204ENST00000366816 NXT2Q9NPJ8 142 aaKnown RBP12.8□□□□□ -0.36
H3F3A-204ENST00000366816 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.79□□□□□ -0.36
H3F3A-204ENST00000366816 IGHV1-58A0A0C4DH39 117 aa12.79□□□□□ -0.36
H3F3A-204ENST00000366816 FABP9Q0Z7S8 132 aa12.79□□□□□ -0.36
H3F3A-204ENST00000366816 C5orf38Q86SI9 138 aa12.79□□□□□ -0.36
H3F3A-204ENST00000366816 IGLV4-3A0A075B6K6 122 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 IFITM10A6NMD0 228 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 PANO1I0J062 215 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 COX7A2LO14548 114 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 COX19Q49B96 90 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 ORMDL2Q53FV1 153 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 SLC7A5P1Q8MH63 180 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 CIRBP-AS1Q8TBR5 109 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 CYSLTR1Q9Y271 337 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 PYGO1Q9Y3Y4 419 aa12.78□□□□□ -0.36
H3F3A-204ENST00000366816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.78□□□□□ -0.36
H3F3A-204ENST00000366816 MALP21145 153 aa12.77□□□□□ -0.37
H3F3A-204ENST00000366816 ZC2HC1BQ5TFG8 222 aa12.77□□□□□ -0.37
H3F3A-204ENST00000366816 PRSS3P2Q8NHM4 247 aa12.77□□□□□ -0.37
H3F3A-204ENST00000366816 IGHV3-64A0A075B6Q5 118 aa12.76□□□□□ -0.37
H3F3A-204ENST00000366816 MT-ND6P03923 174 aa12.76□□□□□ -0.37
H3F3A-204ENST00000366816 FAM229AH3BQW9 127 aa12.75□□□□□ -0.37
H3F3A-204ENST00000366816 K7EMI3 77 aa12.75□□□□□ -0.37
H3F3A-204ENST00000366816 TMEM141Q96I45 108 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms