RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 GAGE2BQ13066 116 aa13□□□□□ -0.33
CD47-202ENST00000361309 OCC1Q8TAD7 63 aa13□□□□□ -0.33
CD47-202ENST00000361309 TRBV6-5A0A0K0K1A5 114 aa12.99□□□□□ -0.33
CD47-202ENST00000361309 TSHBP01222 138 aa12.99□□□□□ -0.33
CD47-202ENST00000361309 CAMPP49913 170 aa12.99□□□□□ -0.33
CD47-202ENST00000361309 EIF5AL1Q6IS14 154 aaKnown RBP12.99□□□□□ -0.33
CD47-202ENST00000361309 CD164L2Q6UWJ8 174 aa12.99□□□□□ -0.33
CD47-202ENST00000361309 CDC42SE2Q9NRR3 84 aa12.99□□□□□ -0.33
CD47-202ENST00000361309 LOC107984640A0A0U1RRK4 108 aa12.98□□□□□ -0.33
CD47-202ENST00000361309 MRAP2Q96G30 205 aa12.98□□□□□ -0.33
CD47-202ENST00000361309 TMEM242Q9NWH2 141 aa12.98□□□□□ -0.33
CD47-202ENST00000361309 A0A1W2PNN7 141 aa12.97□□□□□ -0.33
CD47-202ENST00000361309 IGLV4-69A0A075B6H9 119 aa12.96□□□□□ -0.33
CD47-202ENST00000361309 MRPL52Q86TS9 123 aaKnown RBP12.96□□□□□ -0.33
CD47-202ENST00000361309 ZNF664Q8N3J9 261 aa12.96□□□□□ -0.33
CD47-202ENST00000361309 ISOC2Q96AB3 205 aa12.96□□□□□ -0.33
CD47-202ENST00000361309 ST20Q9HBF5 79 aa12.96□□□□□ -0.33
CD47-202ENST00000361309 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
CD47-202ENST00000361309 PSORS1C2Q9UIG4 136 aa12.94□□□□□ -0.34
CD47-202ENST00000361309 NUP35Q8NFH5 326 aa12.93□□□□□ -0.34
CD47-202ENST00000361309 A8MWL6 223 aa12.92□□□□□ -0.34
CD47-202ENST00000361309 MT-ND6P03923 174 aa12.92□□□□□ -0.34
CD47-202ENST00000361309 MALP21145 153 aa12.92□□□□□ -0.34
CD47-202ENST00000361309 TAGLN2P37802 199 aaKnown RBP12.92□□□□□ -0.34
CD47-202ENST00000361309 POLR2KP53803 58 aaKnown RBP12.92□□□□□ -0.34
CD47-202ENST00000361309 C9orf116Q5BN46 136 aaPredicted RBP12.92□□□□□ -0.34
CD47-202ENST00000361309 FAM210AQ96ND0 272 aa12.92□□□□□ -0.34
CD47-202ENST00000361309 CAMK2N2Q96S95 79 aa12.92□□□□□ -0.34
CD47-202ENST00000361309 C7orf77A4D0Y5 90 aa12.91□□□□□ -0.34
CD47-202ENST00000361309 COX7A2LO14548 114 aa12.91□□□□□ -0.34
CD47-202ENST00000361309 C1orf196B1AJZ1 125 aa12.9□□□□□ -0.34
CD47-202ENST00000361309 APOMO95445 188 aa12.9□□□□□ -0.34
CD47-202ENST00000361309 TRBV27A0A0K0K1C4 114 aa12.89□□□□□ -0.35
CD47-202ENST00000361309 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.89□□□□□ -0.35
CD47-202ENST00000361309 C1orf137Q5JT78 98 aa12.89□□□□□ -0.35
CD47-202ENST00000361309 FAM231DQ6ZW35 169 aa12.89□□□□□ -0.35
CD47-202ENST00000361309 PHF5AQ7RTV0 110 aaKnown RBP12.89□□□□□ -0.35
CD47-202ENST00000361309 BORCS7Q96B45 105 aa12.89□□□□□ -0.35
CD47-202ENST00000361309 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
CD47-202ENST00000361309 RNASE13Q5GAN3 156 aaKnown RBP12.87□□□□□ -0.35
CD47-202ENST00000361309 C2orf48Q96LS8 159 aa12.87□□□□□ -0.35
CD47-202ENST00000361309 TMEM191AQ9H0A3 160 aa12.87□□□□□ -0.35
CD47-202ENST00000361309 RAB4AP20338 218 aa12.86□□□□□ -0.35
CD47-202ENST00000361309 CT83Q5H943 113 aa12.86□□□□□ -0.35
CD47-202ENST00000361309 C5orf38Q86SI9 138 aa12.86□□□□□ -0.35
CD47-202ENST00000361309 OPRPNQ99935 248 aaPredicted RBP12.86□□□□□ -0.35
CD47-202ENST00000361309 TRAV13-1A0A0B4J241 112 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 A0A1B0GUT8 65 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 FCER1GP30273 86 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 SLC51BQ86UW2 128 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 AMN1Q8IY45 258 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 PRR26Q8N8Z3 221 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 UBE2D4Q9Y2X8 147 aa12.85□□□□□ -0.35
CD47-202ENST00000361309 CSDC2Q9Y534 153 aaKnown RBP12.85□□□□□ -0.35
CD47-202ENST00000361309 TMEM250H0YL14 139 aa12.84□□□□□ -0.35
CD47-202ENST00000361309 VCYO14598 125 aa12.84□□□□□ -0.35
CD47-202ENST00000361309 HIGD1CA8MV81 97 aa12.83□□□□□ -0.36
CD47-202ENST00000361309 SMKR1H3BMG3 65 aa12.83□□□□□ -0.36
CD47-202ENST00000361309 SPAG11BQ08648 103 aa12.82□□□□□ -0.36
CD47-202ENST00000361309 TSKUQ8WUA8 353 aa12.82□□□□□ -0.36
CD47-202ENST00000361309 DIRC1Q969H9 104 aa12.82□□□□□ -0.36
CD47-202ENST00000361309 IGLV7-43P04211 117 aa12.81□□□□□ -0.36
CD47-202ENST00000361309 CEBPGP53567 150 aa12.81□□□□□ -0.36
CD47-202ENST00000361309 SMAGPQ0VAQ4 97 aa12.81□□□□□ -0.36
CD47-202ENST00000361309 RNF151Q2KHN1 245 aa12.81□□□□□ -0.36
CD47-202ENST00000361309 Q6ZUT4 128 aa12.81□□□□□ -0.36
CD47-202ENST00000361309 SUMO2P61956 95 aaKnown RBP12.79□□□□□ -0.36
CD47-202ENST00000361309 NRACQ8N912 160 aa12.79□□□□□ -0.36
CD47-202ENST00000361309 KIR2DL4Q99706 377 aa12.79□□□□□ -0.36
CD47-202ENST00000361309 A0A087WZ39 114 aa12.78□□□□□ -0.36
CD47-202ENST00000361309 KRTAP11-1Q8IUC1 163 aa12.78□□□□□ -0.36
CD47-202ENST00000361309 FAM168BA1KXE4 195 aa12.77□□□□□ -0.37
CD47-202ENST00000361309 H0Y9J4 135 aa12.77□□□□□ -0.37
CD47-202ENST00000361309 OR10D4PQ8NGN7 298 aa12.77□□□□□ -0.37
CD47-202ENST00000361309 MRPL35Q9NZE8 188 aaKnown RBP12.77□□□□□ -0.37
CD47-202ENST00000361309 PPP1R17O96001 155 aa12.76□□□□□ -0.37
CD47-202ENST00000361309 LINC01551Q86U37 167 aa12.76□□□□□ -0.37
CD47-202ENST00000361309 ORAOV1Q8WV07 137 aa12.76□□□□□ -0.37
CD47-202ENST00000361309 TIMM21Q9BVV7 248 aa12.76□□□□□ -0.37
CD47-202ENST00000361309 RIGQ13278 110 aa12.75□□□□□ -0.37
CD47-202ENST00000361309 TCTE3Q8IZS6 198 aa12.75□□□□□ -0.37
CD47-202ENST00000361309 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
CD47-202ENST00000361309 IMMP2LQ96T52 175 aa12.75□□□□□ -0.37
CD47-202ENST00000361309 SMIM7Q9BQ49 75 aa12.75□□□□□ -0.37
CD47-202ENST00000361309 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
CD47-202ENST00000361309 OSTCQ9NRP0 149 aa12.74□□□□□ -0.37
CD47-202ENST00000361309 MUC2Q02817 5179 aa12.73□□□□□ -0.37
CD47-202ENST00000361309 PPP1R2P9O14990 202 aa12.73□□□□□ -0.37
CD47-202ENST00000361309 NDUFA1O15239 70 aa12.73□□□□□ -0.37
CD47-202ENST00000361309 C10orf25Q5T742 122 aa12.73□□□□□ -0.37
CD47-202ENST00000361309 FAM19A5Q7Z5A7 132 aaPredicted RBP12.73□□□□□ -0.37
CD47-202ENST00000361309 IGLV1-50A0A075B6I6 118 aa12.72□□□□□ -0.37
CD47-202ENST00000361309 F8WDY8 70 aa12.72□□□□□ -0.37
CD47-202ENST00000361309 ALKAL2Q6UX46 152 aa12.72□□□□□ -0.37
CD47-202ENST00000361309 IGHV3OR16-9A0A0B4J2B5 98 aa12.71□□□□□ -0.37
CD47-202ENST00000361309 KRTAP1-4P0C5Y4 121 aa12.71□□□□□ -0.37
CD47-202ENST00000361309 TLX1NBP0CAT3 122 aa12.71□□□□□ -0.37
CD47-202ENST00000361309 RPL39P62891 51 aaKnown RBP12.71□□□□□ -0.37
CD47-202ENST00000361309 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.37
CD47-202ENST00000361309 UNQ6190/PRO20217Q6UXQ8 127 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms