RNA–Protein interactions for RNA: ENST00000357517.6

PCDH1-202, Transcript of protocadherin 1, humanhuman

TSL 2

Gene PCDH1, Length 3,307 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-202ENST00000357517 A0A087WYN8 130 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 RMI2Q96E14 147 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 Q9UF83 564 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 A0A0J9YX75 114 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 BSPH1Q075Z2 132 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 C6orf226Q5I0X4 101 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 SEM1Q6ZVN7 128 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 FDCSPQ8NFU4 85 aa7.66□□□□□ -1.18
PCDH1-202ENST00000357517 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 IGHV1-69P01742 117 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 DGAT2L7PQ6IED9 249 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 FP248Q71RG6 208 aaPredicted RBP7.65□□□□□ -1.18
PCDH1-202ENST00000357517 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 A0A087WW49 117 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 DEFB123Q8N688 67 aa7.65□□□□□ -1.18
PCDH1-202ENST00000357517 LECT2O14960 151 aa7.65□□□□□ -1.19
PCDH1-202ENST00000357517 IGHV3-11P01762 117 aa7.65□□□□□ -1.19
PCDH1-202ENST00000357517 PMAIP1Q13794 54 aa7.65□□□□□ -1.19
PCDH1-202ENST00000357517 BPESC1Q9GZL8 116 aa7.64□□□□□ -1.19
PCDH1-202ENST00000357517 UBE2D4Q9Y2X8 147 aa7.64□□□□□ -1.19
PCDH1-202ENST00000357517 A0A1W2PNU3 283 aaPredicted RBP7.64□□□□□ -1.19
PCDH1-202ENST00000357517 M0QY20 66 aa7.64□□□□□ -1.19
PCDH1-202ENST00000357517 TIMM17BO60830 172 aa7.64□□□□□ -1.19
PCDH1-202ENST00000357517 SOCS3O14543 225 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 PRM2P04554 102 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 RNASE6Q93091 150 aaKnown RBP7.63□□□□□ -1.19
PCDH1-202ENST00000357517 F8WEM9 126 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 Q6JHZ5 121 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 UNQ9165/PRO28630Q6UXU0 137 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 CCDC140Q96MF4 163 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 C16orf95Q9H693 158 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 ATP6V0E1O15342 81 aa7.63□□□□□ -1.19
PCDH1-202ENST00000357517 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 TOMM7Q9P0U1 55 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 IGHV7-81A0A0B4J1V7 117 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 IGKV3OR2-268A0A0C4DH90 116 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 Q96MF0 132 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 TMEM89A2RUT3 159 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 PSMB8P28062 276 aa7.62□□□□□ -1.19
PCDH1-202ENST00000357517 MRPS36P82909 103 aaKnown RBP7.61□□□□□ -1.19
PCDH1-202ENST00000357517 RPL36AP83881 106 aaKnown RBP7.61□□□□□ -1.19
PCDH1-202ENST00000357517 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.61□□□□□ -1.19
PCDH1-202ENST00000357517 ITLN2Q8WWU7 325 aaPredicted RBP7.61□□□□□ -1.19
PCDH1-202ENST00000357517 RPL36ALQ969Q0 106 aaKnown RBP7.61□□□□□ -1.19
PCDH1-202ENST00000357517 U3KQE9 123 aa7.61□□□□□ -1.19
PCDH1-202ENST00000357517 BDP1A6H8Y1 2624 aa7.61□□□□□ -1.19
PCDH1-202ENST00000357517 CRPP02741 224 aa7.61□□□□□ -1.19
PCDH1-202ENST00000357517 COX6A2Q02221 97 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 LYPD5Q6UWN5 251 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 IGHV3-16A0A0C4DH30 117 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 LRCOL1A6NCL2 159 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 H7BZZ5 65 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 CSMD2Q7Z408 3487 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 NDUFC2-KCTD14E9PQ53 114 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 HAMPP81172 84 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 MIR7-3HGQ8N6C7 128 aa7.6□□□□□ -1.19
PCDH1-202ENST00000357517 IGHV1OR15-1A0A075B7D0 117 aa7.59□□□□□ -1.19
PCDH1-202ENST00000357517 SNRPD3P62318 126 aaKnown RBP7.59□□□□□ -1.19
PCDH1-202ENST00000357517 HIST2H2BCQ6DN03 193 aa7.59□□□□□ -1.19
PCDH1-202ENST00000357517 HIST2H2BDQ6DRA6 164 aa7.59□□□□□ -1.19
PCDH1-202ENST00000357517 RNF5Q99942 180 aa7.59□□□□□ -1.19
PCDH1-202ENST00000357517 WNK1Q9H4A3 2382 aa7.59□□□□□ -1.19
PCDH1-202ENST00000357517 TRBV7-6A0A0J9YX20 115 aa7.58□□□□□ -1.2
PCDH1-202ENST00000357517 SPINK13Q1W4C9 94 aa7.58□□□□□ -1.2
PCDH1-202ENST00000357517 SPG11Q96JI7 2443 aa7.58□□□□□ -1.2
PCDH1-202ENST00000357517 ANKHD1Q8IWZ3 2542 aaKnown RBP7.58□□□□□ -1.2
PCDH1-202ENST00000357517 Q6ZTI0 123 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 LINC00467Q9BRT7 94 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 NPBQ8NG41 125 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 ARRDC1-AS1Q9H2J1 176 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 LINC00337Q8N6G1 96 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 SMIM11BQ8TCY0 68 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 FAM104AQ969W3 186 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
PCDH1-202ENST00000357517 FAM215AQ9Y5M1 114 aa7.57□□□□□ -1.2
PCDH1-202ENST00000357517 A0A087WZ39 114 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 CCKP06307 115 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 MOB4Q9Y3A3 225 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 TRBV6-5A0A0K0K1A5 114 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 NDUFA1O15239 70 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 PRB2P02812 416 aaPredicted RBP7.56□□□□□ -1.2
PCDH1-202ENST00000357517 LINC00158P58513 81 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 FAM222AQ5U5X8 452 aa7.56□□□□□ -1.2
PCDH1-202ENST00000357517 TRAV10A0A0B4J240 114 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.55□□□□□ -1.2
PCDH1-202ENST00000357517 SCXQ7RTU7 201 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 MRPL53Q96EL3 112 aaKnown RBP7.55□□□□□ -1.2
PCDH1-202ENST00000357517 SND1-IT1Q9HBX3 110 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 LENEPQ9Y5L5 61 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 KAAG1Q9UBP8 84 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 PAX4O43316 350 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 FAM229BQ4G0N7 80 aa7.55□□□□□ -1.2
PCDH1-202ENST00000357517 ZFHX2Q9C0A1 2572 aaPredicted RBP7.54□□□□□ -1.2
PCDH1-202ENST00000357517 DEFB109BQ30KR1 87 aa7.54□□□□□ -1.2
PCDH1-202ENST00000357517 CSPG4Q6UVK1 2322 aa7.54□□□□□ -1.2
PCDH1-202ENST00000357517 IGFL2Q6UWQ7 119 aa7.54□□□□□ -1.2
PCDH1-202ENST00000357517 Q8N9W7 124 aa7.54□□□□□ -1.2
PCDH1-202ENST00000357517 RHPN1-AS1Q9BWJ2 59 aa7.54□□□□□ -1.2
PCDH1-202ENST00000357517 E7EQL1 145 aa7.53□□□□□ -1.2
PCDH1-202ENST00000357517 ZNF561-AS1K7EIQ3 104 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms