RNA–Protein interactions for RNA: ENST00000357412.2

LINC01560-201, Transcript of long intergenic non-protein coding RNA 1560, humanhuman

BASIC

Gene LINC01560, Length 1,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560-201ENST00000357412 ZNF25P17030 456 aaPredicted RBP6.4□□□□□ -1.38
LINC01560-201ENST00000357412 XCL1P47992 114 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 PRR3P79522 188 aaKnown RBP6.4□□□□□ -1.38
LINC01560-201ENST00000357412 STPG4Q8N801 248 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 OR5A1Q8NGJ0 315 aa6.4□□□□□ -1.38
LINC01560-201ENST00000357412 LINC00959A0A1B0GUT2 108 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 CCL25O15444 150 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 TSHBP01222 138 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 PMCHP20382 165 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 CT83Q5H943 113 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 LYPD6BQ8NI32 183 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 LINC01600Q96MT4 127 aa6.39□□□□□ -1.39
LINC01560-201ENST00000357412 IGHV1-58A0A0C4DH39 117 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 A8MWL6 223 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 POLR2KP53803 58 aaKnown RBP6.38□□□□□ -1.39
LINC01560-201ENST00000357412 ODF1Q14990 250 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 LINC00526Q96FQ7 95 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 TMEM101Q96IK0 257 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 BTF3L4Q96K17 158 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 TMEM242Q9NWH2 141 aa6.38□□□□□ -1.39
LINC01560-201ENST00000357412 MRPL52Q86TS9 123 aaKnown RBP6.37□□□□□ -1.39
LINC01560-201ENST00000357412 FAM210AQ96ND0 272 aa6.37□□□□□ -1.39
LINC01560-201ENST00000357412 TMEM191AQ9H0A3 160 aa6.37□□□□□ -1.39
LINC01560-201ENST00000357412 ST20Q9HBF5 79 aa6.37□□□□□ -1.39
LINC01560-201ENST00000357412 LINC00474Q9P2X8 69 aa6.37□□□□□ -1.39
LINC01560-201ENST00000357412 TRBV27A0A0K0K1C4 114 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 HIGD1CA8MV81 97 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 RAB4AP20338 218 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 BLOC1S1P78537 153 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 CD164L2Q6UWJ8 174 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 ALKAL2Q6UX46 152 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 LINC01551Q86U37 167 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 TSKUQ8WUA8 353 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 MRAP2Q96G30 205 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 CARD19Q96LW7 228 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 CDIP1Q9H305 208 aa6.36□□□□□ -1.39
LINC01560-201ENST00000357412 A0A1B0GUT8 65 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 CEBPGP53567 150 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 KRTAP10-8P60410 259 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 SYCNQ0VAF6 134 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 SRSF9Q13242 221 aaKnown RBP eCLIP6.35□□□□□ -1.39
LINC01560-201ENST00000357412 SS18Q15532 418 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 SPINK6Q6UWN8 80 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 AMN1Q8IY45 258 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 ZNF664Q8N3J9 261 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 BORCS7Q96B45 105 aa6.35□□□□□ -1.39
LINC01560-201ENST00000357412 A0A0J9YXV3 536 aa6.34□□□□□ -1.39
LINC01560-201ENST00000357412 C7orf77A4D0Y5 90 aa6.34□□□□□ -1.39
LINC01560-201ENST00000357412 OSTCQ9NRP0 149 aa6.34□□□□□ -1.39
LINC01560-201ENST00000357412 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
LINC01560-201ENST00000357412 SMKR1H3BMG3 65 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 ZNF561-AS1K7EIQ3 104 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 VCYO14598 125 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 CAMPP49913 170 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 PTTG1IPP53801 180 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 Q6ZRP5 223 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 NRACQ8N912 160 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 SMIM7Q9BQ49 75 aa6.33□□□□□ -1.4
LINC01560-201ENST00000357412 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
LINC01560-201ENST00000357412 IGLV4-69A0A075B6H9 119 aa6.32□□□□□ -1.4
LINC01560-201ENST00000357412 A0A1W2PNN7 141 aa6.32□□□□□ -1.4
LINC01560-201ENST00000357412 SRP19P09132 144 aaKnown RBP6.32□□□□□ -1.4
LINC01560-201ENST00000357412 NUP35Q8NFH5 326 aa6.32□□□□□ -1.4
LINC01560-201ENST00000357412 UBE2D4Q9Y2X8 147 aa6.32□□□□□ -1.4
LINC01560-201ENST00000357412 V9GYV3 84 aa6.32□□□□□ -1.4
LINC01560-201ENST00000357412 ZNF727A8MUV8 499 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 C1orf196B1AJZ1 125 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 COX7A2LO14548 114 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 MALP21145 153 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 FCER1GP30273 86 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
LINC01560-201ENST00000357412 GAGE2BQ13066 116 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 RIGQ13278 110 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 RNASE13Q5GAN3 156 aaKnown RBP6.31□□□□□ -1.4
LINC01560-201ENST00000357412 REG3GQ6UW15 175 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 AKAP14Q86UN6 197 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 ISOC2Q96AB3 205 aa6.31□□□□□ -1.4
LINC01560-201ENST00000357412 EIF5A2Q9GZV4 153 aaKnown RBP6.31□□□□□ -1.4
LINC01560-201ENST00000357412 TRAV13-1A0A0B4J241 112 aa6.3□□□□□ -1.4
LINC01560-201ENST00000357412 LOC107984640A0A0U1RRK4 108 aa6.3□□□□□ -1.4
LINC01560-201ENST00000357412 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.3□□□□□ -1.4
LINC01560-201ENST00000357412 PPP1R17O96001 155 aa6.3□□□□□ -1.4
LINC01560-201ENST00000357412 APOMO95445 188 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
LINC01560-201ENST00000357412 Q6ZUT4 128 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 C5orf38Q86SI9 138 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 C2orf48Q96LS8 159 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 CAMK2N2Q96S95 79 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
LINC01560-201ENST00000357412 RPL23P62829 140 aaKnown RBP6.28□□□□□ -1.4
LINC01560-201ENST00000357412 MRPL51Q4U2R6 128 aaKnown RBP6.28□□□□□ -1.4
LINC01560-201ENST00000357412 FAM104BQ5XKR9 115 aa6.28□□□□□ -1.4
LINC01560-201ENST00000357412 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
LINC01560-201ENST00000357412 TRBV24-1A0A075B6N3 115 aa6.27□□□□□ -1.41
LINC01560-201ENST00000357412 LINC00862A6NCI5 91 aa6.27□□□□□ -1.41
LINC01560-201ENST00000357412 C9JQL5 133 aa6.27□□□□□ -1.41
LINC01560-201ENST00000357412 PPP1R2P9O14990 202 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms