RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 SS18Q15532 418 aa6.76□□□□□ -1.33
CAPN3-204ENST00000356316 CT83Q5H943 113 aa6.76□□□□□ -1.33
CAPN3-204ENST00000356316 AKAP14Q86UN6 197 aa6.76□□□□□ -1.33
CAPN3-204ENST00000356316 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
CAPN3-204ENST00000356316 LINC00959A0A1B0GUT2 108 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 A0A1B0GUT8 65 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 PHOX2AO14813 284 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 STPG4Q8N801 248 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 PRSS3P2Q8NHM4 247 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 SMIM7Q9BQ49 75 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 TMEM191AQ9H0A3 160 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 LINC00474Q9P2X8 69 aa6.75□□□□□ -1.33
CAPN3-204ENST00000356316 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 FAM231BA6NCW3 169 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 ZNF727A8MUV8 499 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 ZNF561-AS1K7EIQ3 104 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 CCL25O15444 150 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 FCER1GP30273 86 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 FOXI1Q12951 378 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 LYPD6BQ8NI32 183 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 TSKUQ8WUA8 353 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 KRTAP4-8Q9BYQ9 185 aa6.74□□□□□ -1.33
CAPN3-204ENST00000356316 VCYO14598 125 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 PPP1R17O96001 155 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 TSHBP01222 138 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 ESDP10768 282 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 RAB4AP20338 218 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 RIGQ13278 110 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 LINC01551Q86U37 167 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 ZNF664Q8N3J9 261 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 OSTCQ9NRP0 149 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 TMEM242Q9NWH2 141 aa6.73□□□□□ -1.33
CAPN3-204ENST00000356316 TRBV27A0A0K0K1C4 114 aa6.72□□□□□ -1.33
CAPN3-204ENST00000356316 MALP21145 153 aa6.72□□□□□ -1.33
CAPN3-204ENST00000356316 POLR2KP53803 58 aaKnown RBP6.72□□□□□ -1.33
CAPN3-204ENST00000356316 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
CAPN3-204ENST00000356316 CARD19Q96LW7 228 aa6.72□□□□□ -1.33
CAPN3-204ENST00000356316 CDC42SE2Q9NRR3 84 aa6.72□□□□□ -1.33
CAPN3-204ENST00000356316 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.33
CAPN3-204ENST00000356316 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 C7orf77A4D0Y5 90 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 C1orf196B1AJZ1 125 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 GAS8-AS1O95177 125 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 MRPL52Q86TS9 123 aaKnown RBP6.71□□□□□ -1.34
CAPN3-204ENST00000356316 AMN1Q8IY45 258 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 ISOC2Q96AB3 205 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 LINC00526Q96FQ7 95 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 KIR2DL4Q99706 377 aa6.71□□□□□ -1.34
CAPN3-204ENST00000356316 A0A096LNI7 61 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 MT1HL1P0DM35 61 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 TMEM241Q24JQ0 296 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 FAM74A3Q4VXF1 159 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 TMEM18Q96B42 140 aa6.7□□□□□ -1.34
CAPN3-204ENST00000356316 COX7A2LO14548 114 aa6.69□□□□□ -1.34
CAPN3-204ENST00000356316 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
CAPN3-204ENST00000356316 SRP19P09132 144 aaKnown RBP6.69□□□□□ -1.34
CAPN3-204ENST00000356316 SUMO2P61956 95 aaKnown RBP6.69□□□□□ -1.34
CAPN3-204ENST00000356316 PRR3P79522 188 aaKnown RBP6.69□□□□□ -1.34
CAPN3-204ENST00000356316 NUP35Q8NFH5 326 aa6.69□□□□□ -1.34
CAPN3-204ENST00000356316 NAT8BQ9UHF3 227 aa6.69□□□□□ -1.34
CAPN3-204ENST00000356316 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 LOC107984640A0A0U1RRK4 108 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 SMKR1H3BMG3 65 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 CAMPP49913 170 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 REG3GQ6UW15 175 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 CSDC2Q9Y534 153 aaKnown RBP6.68□□□□□ -1.34
CAPN3-204ENST00000356316 V9GYV3 84 aa6.68□□□□□ -1.34
CAPN3-204ENST00000356316 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 TCAPO15273 167 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 APOMO95445 188 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 CKS2P33552 79 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 GAGE2BQ13066 116 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 ADIRFQ15847 76 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 SPINK6Q6UWN8 80 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 Q6ZRP5 223 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 LINC01600Q96MT4 127 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 CAMK2N2Q96S95 79 aa6.67□□□□□ -1.34
CAPN3-204ENST00000356316 A0A1B0GW15 77 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 LINC00862A6NCI5 91 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 FAM104BQ5XKR9 115 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 NRACQ8N912 160 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 UBE2D4Q9Y2X8 147 aa6.66□□□□□ -1.34
CAPN3-204ENST00000356316 F8W036 122 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 S100A8P05109 93 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 PTTG1IPP53801 180 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 RPL23P62829 140 aaKnown RBP6.65□□□□□ -1.34
CAPN3-204ENST00000356316 PEA15Q15121 130 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 MRPL51Q4U2R6 128 aaKnown RBP6.65□□□□□ -1.34
CAPN3-204ENST00000356316 RNASE13Q5GAN3 156 aaKnown RBP6.65□□□□□ -1.34
CAPN3-204ENST00000356316 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 NAT8Q9UHE5 227 aa6.65□□□□□ -1.34
CAPN3-204ENST00000356316 SMIM27A0A1W2PRY6 76 aa6.64□□□□□ -1.35
CAPN3-204ENST00000356316 C5orf38Q86SI9 138 aa6.64□□□□□ -1.35
CAPN3-204ENST00000356316 C2orf48Q96LS8 159 aa6.64□□□□□ -1.35
CAPN3-204ENST00000356316 TRBV24-1A0A075B6N3 115 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 213.2 ms