RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 KIF25-AS1Q9Y6Z4 181 aa13.29□□□□□ -0.28
CTSB-202ENST00000353047 CELSR2Q9HCU4 2923 aa13.28□□□□□ -0.28
CTSB-202ENST00000353047 NXPH4O95158 308 aa13.28□□□□□ -0.28
CTSB-202ENST00000353047 PIK3CD-AS1Q5SR53 167 aa13.28□□□□□ -0.28
CTSB-202ENST00000353047 FLNAP21333 2647 aaKnown RBP13.28□□□□□ -0.28
CTSB-202ENST00000353047 TRGV4A0A0C4DH28 118 aa13.27□□□□□ -0.28
CTSB-202ENST00000353047 NOP10Q9NPE3 64 aaKnown RBP13.27□□□□□ -0.28
CTSB-202ENST00000353047 LGALS9O00182 355 aa13.27□□□□□ -0.29
CTSB-202ENST00000353047 TMEM263Q8WUH6 116 aaKnown RBP13.27□□□□□ -0.29
CTSB-202ENST00000353047 K7EQG2 157 aa13.27□□□□□ -0.29
CTSB-202ENST00000353047 RPL36AP83881 106 aaKnown RBP13.27□□□□□ -0.29
CTSB-202ENST00000353047 RPL36ALQ969Q0 106 aaKnown RBP13.27□□□□□ -0.29
CTSB-202ENST00000353047 IGHV1-58A0A0C4DH39 117 aa13.26□□□□□ -0.29
CTSB-202ENST00000353047 YAE1D1Q9NRH1 226 aa13.26□□□□□ -0.29
CTSB-202ENST00000353047 C5orf38Q86SI9 138 aa13.26□□□□□ -0.29
CTSB-202ENST00000353047 ATP6V0E2Q8NHE4 81 aa13.26□□□□□ -0.29
CTSB-202ENST00000353047 TMEM101Q96IK0 257 aa13.26□□□□□ -0.29
CTSB-202ENST00000353047 TINCRA0A1B0GVN0 87 aa13.25□□□□□ -0.29
CTSB-202ENST00000353047 TRBV10-2A0A0K0K1G8 114 aa13.25□□□□□ -0.29
CTSB-202ENST00000353047 LINC01546A6NGU7 62 aa13.25□□□□□ -0.29
CTSB-202ENST00000353047 MED14OSP0DP75 135 aa13.25□□□□□ -0.29
CTSB-202ENST00000353047 INSP01308 110 aa13.24□□□□□ -0.29
CTSB-202ENST00000353047 NDUFV3P56181 108 aaKnown RBP13.24□□□□□ -0.29
CTSB-202ENST00000353047 FAM236AA0A1B0GUQ0 79 aa13.23□□□□□ -0.29
CTSB-202ENST00000353047 FAM236BA0A1B0GV22 79 aa13.23□□□□□ -0.29
CTSB-202ENST00000353047 ESM1Q9NQ30 184 aa13.23□□□□□ -0.29
CTSB-202ENST00000353047 EIF4EBP3O60516 100 aaPredicted RBP13.23□□□□□ -0.29
CTSB-202ENST00000353047 ATP5G1P05496 136 aa13.23□□□□□ -0.29
CTSB-202ENST00000353047 PEMTQ9UBM1 199 aa13.23□□□□□ -0.29
CTSB-202ENST00000353047 RBMY1A1P0DJD3 496 aaKnown RBP13.22□□□□□ -0.29
CTSB-202ENST00000353047 RBMY1CP0DJD4 496 aa13.22□□□□□ -0.29
CTSB-202ENST00000353047 HTN3P15516 51 aa13.22□□□□□ -0.29
CTSB-202ENST00000353047 RBMY1FQ15415 496 aaKnown RBP13.22□□□□□ -0.29
CTSB-202ENST00000353047 NSUN5P1Q3KNT7 163 aa13.22□□□□□ -0.29
CTSB-202ENST00000353047 CRPP02741 224 aa13.21□□□□□ -0.29
CTSB-202ENST00000353047 BAALC-AS2P0C853 105 aa13.21□□□□□ -0.29
CTSB-202ENST00000353047 Q6ZTI0 123 aa13.21□□□□□ -0.29
CTSB-202ENST00000353047 LINC01356Q8N9X3 169 aa13.21□□□□□ -0.29
CTSB-202ENST00000353047 EDA2RQ9HAV5 297 aa13.21□□□□□ -0.29
CTSB-202ENST00000353047 VSIG2Q96IQ7 327 aa13.21□□□□□ -0.3
CTSB-202ENST00000353047 C9orf85Q96MD7 179 aa13.21□□□□□ -0.3
CTSB-202ENST00000353047 WFDC10AQ9H1F0 79 aa13.2□□□□□ -0.3
CTSB-202ENST00000353047 F8P00451 2351 aa13.2□□□□□ -0.3
CTSB-202ENST00000353047 H7C423 109 aa13.2□□□□□ -0.3
CTSB-202ENST00000353047 H3BUA1 57 aa13.2□□□□□ -0.3
CTSB-202ENST00000353047 IGKV3D-7A0A0C4DH55 119 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 K7EMT4 169 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 PSMB8P28062 276 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 HIST1H4AP62805 103 aaKnown RBP13.19□□□□□ -0.3
CTSB-202ENST00000353047 MIAQ16674 131 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 A0A0B4J2C4 111 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 LINC01619G3V211 115 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 COX6A2Q02221 97 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 HECTD1Q9ULT8 2610 aa13.19□□□□□ -0.3
CTSB-202ENST00000353047 ITPR3Q14573 2671 aa13.18□□□□□ -0.3
CTSB-202ENST00000353047 PLA2G2AP14555 144 aa13.18□□□□□ -0.3
CTSB-202ENST00000353047 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
CTSB-202ENST00000353047 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
CTSB-202ENST00000353047 IGLV1-40P01703 118 aa13.17□□□□□ -0.3
CTSB-202ENST00000353047 LINC00694P0DN24 101 aa13.17□□□□□ -0.3
CTSB-202ENST00000353047 LOC100131303A0A0U1RQF7 123 aa13.17□□□□□ -0.3
CTSB-202ENST00000353047 C6orf226Q5I0X4 101 aa13.17□□□□□ -0.3
CTSB-202ENST00000353047 IGSF10Q6WRI0 2623 aa13.16□□□□□ -0.3
CTSB-202ENST00000353047 TRBV6-5A0A0K0K1A5 114 aa13.16□□□□□ -0.3
CTSB-202ENST00000353047 MRPL23Q16540 153 aaKnown RBP13.16□□□□□ -0.3
CTSB-202ENST00000353047 C9orf153Q5TBE3 101 aa13.16□□□□□ -0.3
CTSB-202ENST00000353047 XCL1P47992 114 aa13.16□□□□□ -0.3
CTSB-202ENST00000353047 SLPIP03973 132 aa13.15□□□□□ -0.3
CTSB-202ENST00000353047 MIR7-3HGQ8N6C7 128 aa13.14□□□□□ -0.31
CTSB-202ENST00000353047 IGLV10-54A0A075B6I4 117 aa13.14□□□□□ -0.31
CTSB-202ENST00000353047 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
CTSB-202ENST00000353047 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
CTSB-202ENST00000353047 DAZ2Q13117 558 aaKnown RBP13.14□□□□□ -0.31
CTSB-202ENST00000353047 DAZ4Q86SG3 579 aaKnown RBP13.14□□□□□ -0.31
CTSB-202ENST00000353047 MAP6D1Q9H9H5 199 aa13.14□□□□□ -0.31
CTSB-202ENST00000353047 DAZ3Q9NR90 486 aaKnown RBP13.14□□□□□ -0.31
CTSB-202ENST00000353047 UBE2D4Q9Y2X8 147 aa13.13□□□□□ -0.31
CTSB-202ENST00000353047 LINC00308Q8TCZ7 52 aa13.13□□□□□ -0.31
CTSB-202ENST00000353047 Q96MF0 132 aa13.13□□□□□ -0.31
CTSB-202ENST00000353047 DEFB4AO15263 64 aa13.12□□□□□ -0.31
CTSB-202ENST00000353047 HERVK_113P63121 156 aa13.12□□□□□ -0.31
CTSB-202ENST00000353047 HERV-K104P63124 156 aa13.12□□□□□ -0.31
CTSB-202ENST00000353047 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.315e-6■□□□□ 8.1
CTSB-202ENST00000353047 AMELXQ99217 191 aa13.12□□□□□ -0.31
CTSB-202ENST00000353047 MXRA5Q9NR99 2828 aa13.12□□□□□ -0.31
CTSB-202ENST00000353047 USP24Q9UPU5 2620 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 TMEM243Q9BU79 118 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 TRBV30A0A0K0K1B3 111 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 RBMY1BA6NDE4 496 aaKnown RBP13.11□□□□□ -0.31
CTSB-202ENST00000353047 RBMY1EA6NEQ0 496 aaKnown RBP13.11□□□□□ -0.31
CTSB-202ENST00000353047 RBMY1DP0C7P1 496 aaKnown RBP13.11□□□□□ -0.31
CTSB-202ENST00000353047 HIST2H2BCQ6DN03 193 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 Q8N2B8 174 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 SND1-IT1Q9HBX3 110 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 C14orf132Q9NPU4 83 aa13.11□□□□□ -0.31
CTSB-202ENST00000353047 FAM19A4Q96LR4 140 aa13.09□□□□□ -0.31
CTSB-202ENST00000353047 ZFHX3Q15911 3703 aa13.09□□□□□ -0.31
CTSB-202ENST00000353047 MRPS36P82909 103 aaKnown RBP13.09□□□□□ -0.31
CTSB-202ENST00000353047 WFDC11Q8NEX6 87 aa13.08□□□□□ -0.32
CTSB-202ENST00000353047 CHCHD7Q9BUK0 85 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms