RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 CDC42SE2Q9NRR3 84 aa12.84□□□□□ -0.35
CLTA-202ENST00000345519 MYCBP2O75592 4640 aa12.84□□□□□ -0.35
CLTA-202ENST00000345519 D6R8Y8 96 aa12.83□□□□□ -0.36
CLTA-202ENST00000345519 TNFRSF6BO95407 300 aa12.83□□□□□ -0.36
CLTA-202ENST00000345519 CKS2P33552 79 aa12.83□□□□□ -0.36
CLTA-202ENST00000345519 Q5VSD8 79 aa12.83□□□□□ -0.36
CLTA-202ENST00000345519 TMEM218A2RU14 115 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 TCAPO15273 167 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 HAMPP81172 84 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 C15orf56Q8N910 161 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 BTF3L4Q96K17 158 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 SMIM2Q9BVW6 85 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 UBE2D4Q9Y2X8 147 aa12.82□□□□□ -0.36
CLTA-202ENST00000345519 NPYP01303 97 aa12.81□□□□□ -0.36
CLTA-202ENST00000345519 CHCHD10Q8WYQ3 142 aaPredicted RBP12.81□□□□□ -0.36
CLTA-202ENST00000345519 TMEM101Q96IK0 257 aa12.81□□□□□ -0.36
CLTA-202ENST00000345519 IMMP2LQ96T52 175 aa12.81□□□□□ -0.36
CLTA-202ENST00000345519 TIMM21Q9BVV7 248 aa12.81□□□□□ -0.36
CLTA-202ENST00000345519 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 FCER1GP30273 86 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 FOXI1Q12951 378 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 SCXQ7RTU7 201 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 ZNF664Q8N3J9 261 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 CHAC1Q9BUX1 264 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 SEC11CQ9BY50 192 aa12.8□□□□□ -0.36
CLTA-202ENST00000345519 LINC00959A0A1B0GUT2 108 aa12.79□□□□□ -0.36
CLTA-202ENST00000345519 GAGE12HA6NDE8 117 aa12.79□□□□□ -0.36
CLTA-202ENST00000345519 ORMDL3Q8N138 153 aa12.79□□□□□ -0.36
CLTA-202ENST00000345519 SMR3BP02814 79 aaPredicted RBP12.78□□□□□ -0.36
CLTA-202ENST00000345519 SLPIP03973 132 aa12.78□□□□□ -0.36
CLTA-202ENST00000345519 SMAGPQ0VAQ4 97 aa12.78□□□□□ -0.36
CLTA-202ENST00000345519 LAMTOR2Q9Y2Q5 125 aa12.78□□□□□ -0.36
CLTA-202ENST00000345519 GVQW2A0A096LPI5 108 aaPredicted RBP12.77□□□□□ -0.37
CLTA-202ENST00000345519 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.37
CLTA-202ENST00000345519 IGKV3OR2-268A0A0C4DH90 116 aa12.76□□□□□ -0.37
CLTA-202ENST00000345519 hDV102S1A0JD36 115 aa12.76□□□□□ -0.37
CLTA-202ENST00000345519 CCL25O15444 150 aa12.76□□□□□ -0.37
CLTA-202ENST00000345519 CIRBPQ14011 172 aaKnown RBP12.76□□□□□ -0.37
CLTA-202ENST00000345519 FAM104AQ969W3 186 aa12.76□□□□□ -0.37
CLTA-202ENST00000345519 TRAV9-1A0A075B6T8 112 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 CFAP161Q6P656 301 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 SDIM1Q6ZPB5 146 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 TMEM136Q6ZRR5 245 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 CIRBP-AS1Q8TBR5 109 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 TMEM18Q96B42 140 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 CTDSP1Q9GZU7 261 aa12.75□□□□□ -0.37
CLTA-202ENST00000345519 PRELID3AQ96N28 172 aa12.74□□□□□ -0.37
CLTA-202ENST00000345519 PKHD1L1Q86WI1 4243 aa12.73□□□□□ -0.37
CLTA-202ENST00000345519 FAM229AH3BQW9 127 aa12.73□□□□□ -0.37
CLTA-202ENST00000345519 CD164L2Q6UWJ8 174 aa12.73□□□□□ -0.37
CLTA-202ENST00000345519 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
CLTA-202ENST00000345519 RPL39P62891 51 aaKnown RBP12.72□□□□□ -0.37
CLTA-202ENST00000345519 MRPS36P82909 103 aaKnown RBP12.72□□□□□ -0.37
CLTA-202ENST00000345519 SS18Q15532 418 aa12.72□□□□□ -0.37
CLTA-202ENST00000345519 Q6ZUT4 128 aa12.72□□□□□ -0.37
CLTA-202ENST00000345519 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
CLTA-202ENST00000345519 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
CLTA-202ENST00000345519 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.71□□□□□ -0.37
CLTA-202ENST00000345519 C1orf196B1AJZ1 125 aa12.71□□□□□ -0.37
CLTA-202ENST00000345519 XCL1P47992 114 aa12.71□□□□□ -0.37
CLTA-202ENST00000345519 CARHSP1Q9Y2V2 147 aaKnown RBP12.71□□□□□ -0.37
CLTA-202ENST00000345519 KRTAP10-4P60372 401 aaPredicted RBP12.7□□□□□ -0.38
CLTA-202ENST00000345519 LINC00528Q8N1L1 170 aa12.7□□□□□ -0.38
CLTA-202ENST00000345519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.7□□□□□ -0.38
CLTA-202ENST00000345519 PANO1I0J062 215 aa12.69□□□□□ -0.38
CLTA-202ENST00000345519 PYGO1Q9Y3Y4 419 aa12.69□□□□□ -0.38
CLTA-202ENST00000345519 IGHV3-64A0A075B6Q5 118 aa12.68□□□□□ -0.38
CLTA-202ENST00000345519 IGHV1-58A0A0C4DH39 117 aa12.68□□□□□ -0.38
CLTA-202ENST00000345519 K7EMI3 77 aa12.68□□□□□ -0.38
CLTA-202ENST00000345519 MAP1LC3AQ9H492 121 aa12.68□□□□□ -0.38
CLTA-202ENST00000345519 INAFM2P0DMQ5 153 aa12.67□□□□□ -0.38
CLTA-202ENST00000345519 Q8N8P6 123 aa12.67□□□□□ -0.38
CLTA-202ENST00000345519 FLG2Q5D862 2391 aaPredicted RBP12.66□□□□□ -0.38
CLTA-202ENST00000345519 HIGD2BQ4VC39 106 aa12.66□□□□□ -0.38
CLTA-202ENST00000345519 RNASE13Q5GAN3 156 aaKnown RBP12.66□□□□□ -0.38
CLTA-202ENST00000345519 HERC1Q15751 4861 aa12.65□□□□□ -0.38
CLTA-202ENST00000345519 PLA2G1BP04054 148 aaKnown RBP12.65□□□□□ -0.38
CLTA-202ENST00000345519 RHEBQ15382 184 aa12.65□□□□□ -0.38
CLTA-202ENST00000345519 SPACA4Q8TDM5 124 aa12.65□□□□□ -0.38
CLTA-202ENST00000345519 RAB5AP20339 215 aa12.64□□□□□ -0.39
CLTA-202ENST00000345519 TRAV13-1A0A0B4J241 112 aa12.63□□□□□ -0.39
CLTA-202ENST00000345519 GNB1LQ9BYB4 327 aa12.63□□□□□ -0.39
CLTA-202ENST00000345519 IGLV4-3A0A075B6K6 122 aa12.62□□□□□ -0.39
CLTA-202ENST00000345519 IGHV3OR16-9A0A0B4J2B5 98 aa12.62□□□□□ -0.39
CLTA-202ENST00000345519 COX7A2LO14548 114 aa12.62□□□□□ -0.39
CLTA-202ENST00000345519 NPSP0C0P6 89 aa12.62□□□□□ -0.39
CLTA-202ENST00000345519 IFI27P40305 119 aaPredicted RBP12.62□□□□□ -0.39
CLTA-202ENST00000345519 OPRPNQ99935 248 aaPredicted RBP12.62□□□□□ -0.39
CLTA-202ENST00000345519 FAT3Q8TDW7 4589 aa12.62□□□□□ -0.39
CLTA-202ENST00000345519 DMBT1Q9UGM3 2413 aaPredicted RBP12.61□□□□□ -0.39
CLTA-202ENST00000345519 LRP1Q07954 4544 aaKnown RBP12.61□□□□□ -0.39
CLTA-202ENST00000345519 ORMDL2Q53FV1 153 aa12.61□□□□□ -0.39
CLTA-202ENST00000345519 NXT2Q9NPJ8 142 aaKnown RBP12.61□□□□□ -0.39
CLTA-202ENST00000345519 LOC389332A0A1B0GUA5 103 aa12.6□□□□□ -0.39
CLTA-202ENST00000345519 S100PP25815 95 aa12.6□□□□□ -0.39
CLTA-202ENST00000345519 COX19Q49B96 90 aa12.6□□□□□ -0.39
CLTA-202ENST00000345519 LINC01546A6NGU7 62 aa12.59□□□□□ -0.39
CLTA-202ENST00000345519 PLAC8Q9NZF1 115 aa12.59□□□□□ -0.39
CLTA-202ENST00000345519 CHTF8P0CG12 524 aa12.58□□□□□ -0.4
CLTA-202ENST00000345519 COX6A2Q02221 97 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms