RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 TMEM242Q9NWH2 141 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 V9GYV3 84 aa11.39□□□□□ -0.59
CKLF-202ENST00000345436 CCL25O15444 150 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 S100A8P05109 93 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 XCL1P47992 114 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 ADIRFQ15847 76 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 C15orf56Q8N910 161 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 TMEM18Q96B42 140 aa11.38□□□□□ -0.59
CKLF-202ENST00000345436 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
CKLF-202ENST00000345436 IGHV1-58A0A0C4DH39 117 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 TCAPO15273 167 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 KRTAP10-4P60372 401 aaPredicted RBP11.37□□□□□ -0.59
CKLF-202ENST00000345436 RPL23P62829 140 aaKnown RBP11.37□□□□□ -0.59
CKLF-202ENST00000345436 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 C7orf33Q8WU49 177 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 LINC00474Q9P2X8 69 aa11.37□□□□□ -0.59
CKLF-202ENST00000345436 LINC00862A6NCI5 91 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 SLPIP03973 132 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 SUMO2P61956 95 aaKnown RBP11.36□□□□□ -0.59
CKLF-202ENST00000345436 FOXI1Q12951 378 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 SERTAD4-AS1Q5TG53 156 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 ZNF664Q8N3J9 261 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
CKLF-202ENST00000345436 A0A087WYN8 130 aa11.35□□□□□ -0.59
CKLF-202ENST00000345436 COX6A2Q02221 97 aa11.35□□□□□ -0.59
CKLF-202ENST00000345436 CD164L2Q6UWJ8 174 aa11.35□□□□□ -0.59
CKLF-202ENST00000345436 SPACA4Q8TDM5 124 aa11.35□□□□□ -0.59
CKLF-202ENST00000345436 C1orf196B1AJZ1 125 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 F8W036 122 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 PANO1I0J062 215 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 ZNF561-AS1K7EIQ3 104 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 GAS8-AS1O95177 125 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 FAM104BQ5XKR9 115 aa11.34□□□□□ -0.59
CKLF-202ENST00000345436 CSDC2Q9Y534 153 aaKnown RBP11.34□□□□□ -0.59
CKLF-202ENST00000345436 SMIM27A0A1W2PRY6 76 aa11.33□□□□□ -0.6
CKLF-202ENST00000345436 CKS2P33552 79 aa11.33□□□□□ -0.6
CKLF-202ENST00000345436 CAMPP49913 170 aa11.33□□□□□ -0.6
CKLF-202ENST00000345436 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
CKLF-202ENST00000345436 C20orf78Q9BR46 151 aa11.33□□□□□ -0.6
CKLF-202ENST00000345436 MALP21145 153 aa11.32□□□□□ -0.6
CKLF-202ENST00000345436 PLAC8Q9NZF1 115 aa11.32□□□□□ -0.6
CKLF-202ENST00000345436 SMKR1H3BMG3 65 aa11.31□□□□□ -0.6
CKLF-202ENST00000345436 CHTF8P0CG12 524 aa11.31□□□□□ -0.6
CKLF-202ENST00000345436 Q6ZRU5 148 aa11.31□□□□□ -0.6
CKLF-202ENST00000345436 IGKV2-24A0A0C4DH68 120 aa11.3□□□□□ -0.6
CKLF-202ENST00000345436 A0A1B0GVG6 124 aa11.3□□□□□ -0.6
CKLF-202ENST00000345436 MRPL51Q4U2R6 128 aaKnown RBP11.3□□□□□ -0.6
CKLF-202ENST00000345436 NRACQ8N912 160 aa11.3□□□□□ -0.6
CKLF-202ENST00000345436 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 COX7A2LO14548 114 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 PPBPP02775 128 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 RPL32P62910 135 aaKnown RBP11.29□□□□□ -0.6
CKLF-202ENST00000345436 HBBP68871 147 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 PRSS3P2Q8NHM4 247 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 TIMM21Q9BVV7 248 aa11.29□□□□□ -0.6
CKLF-202ENST00000345436 C9JQL5 133 aa11.28□□□□□ -0.6
CKLF-202ENST00000345436 APOMO95445 188 aa11.28□□□□□ -0.6
CKLF-202ENST00000345436 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
CKLF-202ENST00000345436 STPG4Q8N801 248 aa11.28□□□□□ -0.6
CKLF-202ENST00000345436 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
CKLF-202ENST00000345436 TRAV13-1A0A0B4J241 112 aa11.26□□□□□ -0.61
CKLF-202ENST00000345436 PHOX2AO14813 284 aa11.26□□□□□ -0.61
CKLF-202ENST00000345436 TNFRSF6BO95407 300 aa11.25□□□□□ -0.61
CKLF-202ENST00000345436 RAB14P61106 215 aa11.25□□□□□ -0.61
CKLF-202ENST00000345436 SRSF3P84103 164 aaKnown RBP11.25□□□□□ -0.61
CKLF-202ENST00000345436 MRPL54Q6P161 138 aaKnown RBP11.25□□□□□ -0.61
CKLF-202ENST00000345436 RAB5AP20339 215 aa11.24□□□□□ -0.61
CKLF-202ENST00000345436 ATP5L2Q7Z4Y8 100 aa11.24□□□□□ -0.61
CKLF-202ENST00000345436 SPANXA1Q9NS26 97 aa11.24□□□□□ -0.61
CKLF-202ENST00000345436 IGLV4-69A0A075B6H9 119 aa11.23□□□□□ -0.61
CKLF-202ENST00000345436 D6R8Y8 96 aa11.23□□□□□ -0.61
CKLF-202ENST00000345436 SMIM2Q9BVW6 85 aa11.23□□□□□ -0.61
CKLF-202ENST00000345436 A0A096LNI7 61 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 LOC107984640A0A0U1RRK4 108 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 HNRNPA3P51991 378 aaKnown RBP11.22□□□□□ -0.61
CKLF-202ENST00000345436 ORMDL3Q8N138 153 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 LINC00526Q96FQ7 95 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 C2orf48Q96LS8 159 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 CAMK2N2Q96S95 79 aa11.22□□□□□ -0.61
CKLF-202ENST00000345436 PNRC1Q12796 327 aaPredicted RBP11.21□□□□□ -0.61
CKLF-202ENST00000345436 A0A1B0GXF2 115 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 F8WDY8 70 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 MT-ND4LP03901 98 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 RNASE13Q5GAN3 156 aaKnown RBP11.2□□□□□ -0.62
CKLF-202ENST00000345436 TMEM136Q6ZRR5 245 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 Q6ZUT4 128 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 C5orf38Q86SI9 138 aa11.2□□□□□ -0.62
CKLF-202ENST00000345436 MRPS36P82909 103 aaKnown RBP11.19□□□□□ -0.62
CKLF-202ENST00000345436 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
CKLF-202ENST00000345436 IFI27P40305 119 aaPredicted RBP11.18□□□□□ -0.62
CKLF-202ENST00000345436 PTTG1IPP53801 180 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 GAGE2BQ13066 116 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 ANAPC16Q96DE5 110 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 PRELID3AQ96N28 172 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 PLA2G2DQ9UNK4 145 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 LAMTOR2Q9Y2Q5 125 aa11.18□□□□□ -0.62
CKLF-202ENST00000345436 NPYP01303 97 aa11.17□□□□□ -0.62
CKLF-202ENST00000345436 RPL39P62891 51 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms