RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 RIGQ13278 110 aa10.82□□□□□ -0.68
BRCC3-202ENST00000340647 ADIRFQ15847 76 aa10.82□□□□□ -0.68
BRCC3-202ENST00000340647 MRPL51Q4U2R6 128 aaKnown RBP10.82□□□□□ -0.68
BRCC3-202ENST00000340647 HIGD2BQ4VC39 106 aa10.82□□□□□ -0.68
BRCC3-202ENST00000340647 MRPL52Q86TS9 123 aaKnown RBP10.82□□□□□ -0.68
BRCC3-202ENST00000340647 GVQW2A0A096LPI5 108 aaPredicted RBP10.81□□□□□ -0.68
BRCC3-202ENST00000340647 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
BRCC3-202ENST00000340647 SPACA4Q8TDM5 124 aa10.81□□□□□ -0.68
BRCC3-202ENST00000340647 NAT8BQ9UHF3 227 aa10.81□□□□□ -0.68
BRCC3-202ENST00000340647 IGHV3-64A0A075B6Q5 118 aa10.8□□□□□ -0.68
BRCC3-202ENST00000340647 A0A087WYN8 130 aa10.8□□□□□ -0.68
BRCC3-202ENST00000340647 RPL37AP61513 92 aaKnown RBP10.8□□□□□ -0.68
BRCC3-202ENST00000340647 FAM104AQ969W3 186 aa10.8□□□□□ -0.68
BRCC3-202ENST00000340647 SUMO2P61956 95 aaKnown RBP10.79□□□□□ -0.68
BRCC3-202ENST00000340647 PRSS3P2Q8NHM4 247 aa10.79□□□□□ -0.68
BRCC3-202ENST00000340647 LINC00526Q96FQ7 95 aa10.79□□□□□ -0.68
BRCC3-202ENST00000340647 AP5S1Q9NUS5 200 aa10.79□□□□□ -0.68
BRCC3-202ENST00000340647 VCYO14598 125 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 CCL25O15444 150 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 XCL1P47992 114 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 COX6A2Q02221 97 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 PEA15Q15121 130 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 SMDT1Q9H4I9 107 aa10.78□□□□□ -0.68
BRCC3-202ENST00000340647 A0A1B0GXF2 115 aa10.77□□□□□ -0.69
BRCC3-202ENST00000340647 C7orf77A4D0Y5 90 aa10.77□□□□□ -0.69
BRCC3-202ENST00000340647 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
BRCC3-202ENST00000340647 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
BRCC3-202ENST00000340647 UBE2D4Q9Y2X8 147 aa10.77□□□□□ -0.69
BRCC3-202ENST00000340647 TRBV24-1A0A075B6N3 115 aa10.76□□□□□ -0.69
BRCC3-202ENST00000340647 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.76□□□□□ -0.69
BRCC3-202ENST00000340647 CAMPP49913 170 aa10.76□□□□□ -0.69
BRCC3-202ENST00000340647 PLAC8Q9NZF1 115 aa10.76□□□□□ -0.69
BRCC3-202ENST00000340647 RNASE13Q5GAN3 156 aaKnown RBP10.75□□□□□ -0.69
BRCC3-202ENST00000340647 TMEM101Q96IK0 257 aa10.75□□□□□ -0.69
BRCC3-202ENST00000340647 BTF3L4Q96K17 158 aa10.75□□□□□ -0.69
BRCC3-202ENST00000340647 CSDC2Q9Y534 153 aaKnown RBP10.75□□□□□ -0.69
BRCC3-202ENST00000340647 OXTP01178 125 aa10.74□□□□□ -0.69
BRCC3-202ENST00000340647 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
BRCC3-202ENST00000340647 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
BRCC3-202ENST00000340647 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
BRCC3-202ENST00000340647 A0A096LNI7 61 aa10.73□□□□□ -0.69
BRCC3-202ENST00000340647 RPL32P62910 135 aaKnown RBP10.73□□□□□ -0.69
BRCC3-202ENST00000340647 TNXBP22105 4242 aa10.73□□□□□ -0.69
BRCC3-202ENST00000340647 LINC00862A6NCI5 91 aa10.72□□□□□ -0.69
BRCC3-202ENST00000340647 TNFRSF6BO95407 300 aa10.72□□□□□ -0.69
BRCC3-202ENST00000340647 PPP1R17O96001 155 aa10.72□□□□□ -0.69
BRCC3-202ENST00000340647 Q6ZUT4 128 aa10.72□□□□□ -0.69
BRCC3-202ENST00000340647 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
BRCC3-202ENST00000340647 IGHV1-58A0A0C4DH39 117 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 A0A1B0GW15 77 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 NPYP01303 97 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 MT1HL1P0DM35 61 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 FCER1GP30273 86 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
BRCC3-202ENST00000340647 SS18Q15532 418 aa10.71□□□□□ -0.69
BRCC3-202ENST00000340647 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
BRCC3-202ENST00000340647 D6R8Y8 96 aa10.7□□□□□ -0.7
BRCC3-202ENST00000340647 PPP1R2P9O14990 202 aa10.7□□□□□ -0.7
BRCC3-202ENST00000340647 CKS2P33552 79 aa10.7□□□□□ -0.7
BRCC3-202ENST00000340647 TIMM21Q9BVV7 248 aa10.7□□□□□ -0.7
BRCC3-202ENST00000340647 PHOX2AO14813 284 aa10.69□□□□□ -0.7
BRCC3-202ENST00000340647 HBBP68871 147 aa10.69□□□□□ -0.7
BRCC3-202ENST00000340647 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
BRCC3-202ENST00000340647 KIR2DL4Q99706 377 aa10.69□□□□□ -0.7
BRCC3-202ENST00000340647 OPRPNQ99935 248 aaPredicted RBP10.69□□□□□ -0.7
BRCC3-202ENST00000340647 SMIM2Q9BVW6 85 aa10.69□□□□□ -0.7
BRCC3-202ENST00000340647 DPH3Q96FX2 82 aa10.68□□□□□ -0.7
BRCC3-202ENST00000340647 C1orf196B1AJZ1 125 aa10.67□□□□□ -0.7
BRCC3-202ENST00000340647 STPG4Q8N801 248 aa10.67□□□□□ -0.7
BRCC3-202ENST00000340647 IGLV4-69A0A075B6H9 119 aa10.66□□□□□ -0.7
BRCC3-202ENST00000340647 TRAV13-1A0A0B4J241 112 aa10.66□□□□□ -0.7
BRCC3-202ENST00000340647 TCAPO15273 167 aa10.66□□□□□ -0.7
BRCC3-202ENST00000340647 CARD19Q96LW7 228 aa10.66□□□□□ -0.7
BRCC3-202ENST00000340647 SYCNQ0VAF6 134 aa10.65□□□□□ -0.7
BRCC3-202ENST00000340647 Q6ZRU5 148 aa10.65□□□□□ -0.7
BRCC3-202ENST00000340647 C5orf38Q86SI9 138 aa10.65□□□□□ -0.7
BRCC3-202ENST00000340647 PLA2G2DQ9UNK4 145 aa10.65□□□□□ -0.7
BRCC3-202ENST00000340647 COX7A2LO14548 114 aa10.64□□□□□ -0.71
BRCC3-202ENST00000340647 ATP5L2Q7Z4Y8 100 aa10.64□□□□□ -0.71
BRCC3-202ENST00000340647 IGHV3OR16-9A0A0B4J2B5 98 aa10.63□□□□□ -0.71
BRCC3-202ENST00000340647 PRSS47A8MTI9 375 aa10.63□□□□□ -0.71
BRCC3-202ENST00000340647 F8W036 122 aa10.63□□□□□ -0.71
BRCC3-202ENST00000340647 ZNF561-AS1K7EIQ3 104 aa10.63□□□□□ -0.71
BRCC3-202ENST00000340647 PPBPP02775 128 aa10.63□□□□□ -0.71
BRCC3-202ENST00000340647 S100A8P05109 93 aa10.62□□□□□ -0.71
BRCC3-202ENST00000340647 PRR3P79522 188 aaKnown RBP10.62□□□□□ -0.71
BRCC3-202ENST00000340647 MRPS36P82909 103 aaKnown RBP10.62□□□□□ -0.71
BRCC3-202ENST00000340647 TMEM136Q6ZRR5 245 aa10.62□□□□□ -0.71
BRCC3-202ENST00000340647 PTTG1IPP53801 180 aa10.61□□□□□ -0.71
BRCC3-202ENST00000340647 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
BRCC3-202ENST00000340647 TMEM18Q96B42 140 aa10.61□□□□□ -0.71
BRCC3-202ENST00000340647 PRELID3AQ96N28 172 aa10.61□□□□□ -0.71
BRCC3-202ENST00000340647 SPANXA1Q9NS26 97 aa10.61□□□□□ -0.71
BRCC3-202ENST00000340647 A0A1W2PNN7 141 aa10.6□□□□□ -0.71
BRCC3-202ENST00000340647 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.6□□□□□ -0.71
BRCC3-202ENST00000340647 ADCYAP1P18509 176 aa10.6□□□□□ -0.71
BRCC3-202ENST00000340647 IFITM2Q01629 132 aa10.6□□□□□ -0.71
BRCC3-202ENST00000340647 SMAGPQ0VAQ4 97 aa10.6□□□□□ -0.71
BRCC3-202ENST00000340647 MALP21145 153 aa10.59□□□□□ -0.71
BRCC3-202ENST00000340647 PNRC1Q12796 327 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms