RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 NUP35Q8NFH5 326 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 OR5A1Q8NGJ0 315 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 TMEM191AQ9H0A3 160 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 OSTCQ9NRP0 149 aa8.44□□□□□ -1.06
NUDCD3-201ENST00000338427 H7C423 109 aa8.43□□□□□ -1.06
NUDCD3-201ENST00000338427 BORCS7Q96B45 105 aa8.43□□□□□ -1.06
NUDCD3-201ENST00000338427 PLAC8Q9NZF1 115 aa8.43□□□□□ -1.06
NUDCD3-201ENST00000338427 PHOX2AO14813 284 aa8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 MT1HL1P0DM35 61 aa8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 RNASE13Q5GAN3 156 aaKnown RBP8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 TMEM101Q96IK0 257 aa8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 BTF3L4Q96K17 158 aa8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 CDC42SE2Q9NRR3 84 aa8.42□□□□□ -1.06
NUDCD3-201ENST00000338427 GVQW2A0A096LPI5 108 aaPredicted RBP8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 NDUFS6O75380 124 aaKnown RBP8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 RPL23P62829 140 aaKnown RBP8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 TMEM241Q24JQ0 296 aa8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 SERTAD4-AS1Q5TG53 156 aa8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 NRACQ8N912 160 aa8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 ISOC2Q96AB3 205 aa8.41□□□□□ -1.06
NUDCD3-201ENST00000338427 TNXBP22105 4242 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 A0A096LNI7 61 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 RIGQ13278 110 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 STPG4Q8N801 248 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 MRAP2Q96G30 205 aa8.4□□□□□ -1.06
NUDCD3-201ENST00000338427 VCYO14598 125 aa8.39□□□□□ -1.07
NUDCD3-201ENST00000338427 ZNF25P17030 456 aaPredicted RBP8.39□□□□□ -1.07
NUDCD3-201ENST00000338427 ODF1Q14990 250 aa8.39□□□□□ -1.07
NUDCD3-201ENST00000338427 MRPL51Q4U2R6 128 aaKnown RBP8.39□□□□□ -1.07
NUDCD3-201ENST00000338427 CAMPP49913 170 aa8.38□□□□□ -1.07
NUDCD3-201ENST00000338427 SS18Q15532 418 aa8.38□□□□□ -1.07
NUDCD3-201ENST00000338427 ADIRFQ15847 76 aa8.38□□□□□ -1.07
NUDCD3-201ENST00000338427 MRPL52Q86TS9 123 aaKnown RBP8.38□□□□□ -1.07
NUDCD3-201ENST00000338427 IGHV1-58A0A0C4DH39 117 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 C7orf77A4D0Y5 90 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 FAM104BQ5XKR9 115 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 Q6ZRU5 148 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 PLA2G2DQ9UNK4 145 aa8.37□□□□□ -1.07
NUDCD3-201ENST00000338427 FCER1GP30273 86 aa8.36□□□□□ -1.07
NUDCD3-201ENST00000338427 SUMO2P61956 95 aaKnown RBP8.36□□□□□ -1.07
NUDCD3-201ENST00000338427 FAM74A3Q4VXF1 159 aa8.36□□□□□ -1.07
NUDCD3-201ENST00000338427 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
NUDCD3-201ENST00000338427 UBE2D4Q9Y2X8 147 aa8.36□□□□□ -1.07
NUDCD3-201ENST00000338427 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 TRAV13-1A0A0B4J241 112 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 SMIM27A0A1W2PRY6 76 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 SYCNQ0VAF6 134 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 FAM104AQ969W3 186 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 OPRPNQ99935 248 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 NAT8BQ9UHF3 227 aa8.35□□□□□ -1.07
NUDCD3-201ENST00000338427 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
NUDCD3-201ENST00000338427 RPL39P62891 51 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-201ENST00000338427 MRPL54Q6P161 138 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-201ENST00000338427 Q6ZUT4 128 aa8.34□□□□□ -1.07
NUDCD3-201ENST00000338427 C7orf33Q8WU49 177 aa8.34□□□□□ -1.07
NUDCD3-201ENST00000338427 A0A0J9YXV3 536 aa8.33□□□□□ -1.08
NUDCD3-201ENST00000338427 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
NUDCD3-201ENST00000338427 CKS2P33552 79 aa8.33□□□□□ -1.08
NUDCD3-201ENST00000338427 GAGE2BQ13066 116 aa8.33□□□□□ -1.08
NUDCD3-201ENST00000338427 C1orf196B1AJZ1 125 aa8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 TNFRSF6BO95407 300 aa8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 MALP21145 153 aa8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 PRR3P79522 188 aaKnown RBP8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 PEA15Q15121 130 aa8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 KIR2DL4Q99706 377 aa8.32□□□□□ -1.08
NUDCD3-201ENST00000338427 COX7A2LO14548 114 aa8.31□□□□□ -1.08
NUDCD3-201ENST00000338427 TCAPO15273 167 aa8.31□□□□□ -1.08
NUDCD3-201ENST00000338427 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
NUDCD3-201ENST00000338427 TRBV24-1A0A075B6N3 115 aa8.3□□□□□ -1.08
NUDCD3-201ENST00000338427 D6R8Y8 96 aa8.3□□□□□ -1.08
NUDCD3-201ENST00000338427 PPP1R17O96001 155 aa8.3□□□□□ -1.08
NUDCD3-201ENST00000338427 NPYP01303 97 aa8.3□□□□□ -1.08
NUDCD3-201ENST00000338427 LINC00862A6NCI5 91 aa8.29□□□□□ -1.08
NUDCD3-201ENST00000338427 PPP1R2P9O14990 202 aa8.29□□□□□ -1.08
NUDCD3-201ENST00000338427 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
NUDCD3-201ENST00000338427 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
NUDCD3-201ENST00000338427 C20orf78Q9BR46 151 aa8.29□□□□□ -1.08
NUDCD3-201ENST00000338427 A0A1B0GXF2 115 aa8.28□□□□□ -1.08
NUDCD3-201ENST00000338427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.28□□□□□ -1.08
NUDCD3-201ENST00000338427 SRSF9Q13242 221 aaKnown RBP eCLIP8.28□□□□□ -1.08
NUDCD3-201ENST00000338427 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
NUDCD3-201ENST00000338427 SMIM2Q9BVW6 85 aa8.28□□□□□ -1.08
NUDCD3-201ENST00000338427 LOC107984640A0A0U1RRK4 108 aa8.27□□□□□ -1.09
NUDCD3-201ENST00000338427 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
NUDCD3-201ENST00000338427 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
NUDCD3-201ENST00000338427 A0A1B0GW15 77 aa8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 RPL32P62910 135 aaKnown RBP8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 HBBP68871 147 aa8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 C9orf116Q5BN46 136 aaPredicted RBP8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 ZC2HC1BQ5TFG8 222 aa8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 TMEM18Q96B42 140 aa8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 LINC00474Q9P2X8 69 aa8.26□□□□□ -1.09
NUDCD3-201ENST00000338427 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
NUDCD3-201ENST00000338427 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
NUDCD3-201ENST00000338427 SPAG11BQ08648 103 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms