RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 TM2D3Q9BRN9 247 aa7.13□□□□□ -1.27
HMGB3-201ENST00000325307 PRO0461Q9UI25 63 aa7.13□□□□□ -1.27
HMGB3-201ENST00000325307 PPP1R17O96001 155 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 HBDP02042 147 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 P0DMU3 169 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 FAM231AP0DMU4 169 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 FAM231CP0DMU5 169 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 HTN3P15516 51 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 Q6ZSN1 163 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 FAM19A5Q7Z5A7 132 aaPredicted RBP7.12□□□□□ -1.27
HMGB3-201ENST00000325307 A0A0J9YWU9 116 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 E9PLD3 99 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 M0QY20 66 aa7.12□□□□□ -1.27
HMGB3-201ENST00000325307 NACAE9PAV3 2078 aa7.11□□□□□ -1.27
HMGB3-201ENST00000325307 SUMO2P61956 95 aaKnown RBP7.11□□□□□ -1.27
HMGB3-201ENST00000325307 TCTAP57738 103 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 LINC00612Q8N6U2 182 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 Q8N8P6 123 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 C20orf78Q9BR46 151 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 DEFB104AQ8WTQ1 72 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 B9D2Q9BPU9 175 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 C11orf68Q9H3H3 251 aaKnown RBP7.1□□□□□ -1.27
HMGB3-201ENST00000325307 K7EQD1 137 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 NDUFV3P56181 108 aaKnown RBP7.1□□□□□ -1.27
HMGB3-201ENST00000325307 SLC25A29Q8N8R3 303 aa7.1□□□□□ -1.27
HMGB3-201ENST00000325307 NXT2Q9NPJ8 142 aaKnown RBP7.1□□□□□ -1.27
HMGB3-201ENST00000325307 ATP5G1P05496 136 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 TENM3Q9P273 2699 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 SDHAF1A6NFY7 115 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 SMIM13P0DJ93 91 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 FCER1GP30273 86 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 FHL2Q14192 279 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 ZFAND6Q6FIF0 208 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 SMIM2Q9BVW6 85 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 Q9UF83 564 aa7.09□□□□□ -1.27
HMGB3-201ENST00000325307 LOC107984640A0A0U1RRK4 108 aa7.09□□□□□ -1.28
HMGB3-201ENST00000325307 ATP6V0E2Q8NHE4 81 aa7.09□□□□□ -1.28
HMGB3-201ENST00000325307 IFI27L1Q96BM0 104 aa7.09□□□□□ -1.28
HMGB3-201ENST00000325307 HHLA3Q9XRX5 114 aa7.09□□□□□ -1.28
HMGB3-201ENST00000325307 NEXN-AS1Q8NBZ9 246 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 PRADC1Q9BSG0 188 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 ZNRF2Q8NHG8 242 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 C11orf45Q8TAV5 145 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
HMGB3-201ENST00000325307 WFDC2Q14508 124 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 RHOHQ15669 191 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 C12orf74Q32Q52 190 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 GAGE13Q4V321 117 aa7.08□□□□□ -1.28
HMGB3-201ENST00000325307 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
HMGB3-201ENST00000325307 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 NANOS2P60321 138 aaKnown RBP7.07□□□□□ -1.28
HMGB3-201ENST00000325307 KIR2DL4Q99706 377 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 A0A0J9YY99 117 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 A0A1B0GWB2 263 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 TRBV6-4A0A1B0GX49 114 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 A0A1B0GX51 115 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 VCYO14598 125 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 TRBV10-1A0A0K0K1A3 114 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 TRBV6-5A0A0K0K1A5 114 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 LOC100131303A0A0U1RQF7 123 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 FXYD2P54710 66 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 EDA2RQ9HAV5 297 aa7.07□□□□□ -1.28
HMGB3-201ENST00000325307 IGHV3-38A0A0C4DH36 116 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 PAX4O43316 350 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 Q6ZTC4 211 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 TRBV7-3A0A075B6L6 115 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 LAGE3Q14657 143 aa7.06□□□□□ -1.28
HMGB3-201ENST00000325307 GYPEP15421 78 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 POLR2KP53803 58 aaKnown RBP7.05□□□□□ -1.28
HMGB3-201ENST00000325307 SH2D6Q7Z4S9 175 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 PCP2Q8IVA1 136 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 RAB37Q96AX2 223 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 IGLL5B9A064 214 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 I3L3M4 83 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 TAL2Q16559 108 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 OR13C6PQ8NH95 151 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 MEIG1Q5JSS6 88 aa7.05□□□□□ -1.28
HMGB3-201ENST00000325307 TRBV27A0A0K0K1C4 114 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 J3KT08 172 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 FOXI1Q12951 378 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 ETDBQ3ZM63 59 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 CEND1Q8N111 149 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 C9JAW5 83 aa7.04□□□□□ -1.28
HMGB3-201ENST00000325307 RPS28P62857 69 aaKnown RBP7.04□□□□□ -1.28
HMGB3-201ENST00000325307 ORMDL2Q53FV1 153 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 A0A096LPF7 62 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 DEFB131BA0A096LNP1 70 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 UBE2D3P61077 147 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 UBE2D2P62837 147 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
HMGB3-201ENST00000325307 IGKV2D-26A0A0A0MRZ7 120 aa7.02□□□□□ -1.29
HMGB3-201ENST00000325307 DAZ4Q86SG3 579 aaKnown RBP7.02□□□□□ -1.29
HMGB3-201ENST00000325307 DAZ3Q9NR90 486 aaKnown RBP7.02□□□□□ -1.29
HMGB3-201ENST00000325307 TSHBP01222 138 aa7.02□□□□□ -1.29
HMGB3-201ENST00000325307 Q6Q795 121 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms