RNA–Protein interactions for RNA: ENST00000317633.13

SERF1A-201, Transcript of small EDRK-rich factor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SERF1A, Length 963 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-201ENST00000317633 LYPD6BQ8NI32 183 aa12.61□□□□□ -0.39
SERF1A-201ENST00000317633 TSHBP01222 138 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 CEBPGP53567 150 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 CARD19Q96LW7 228 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 LINC01600Q96MT4 127 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 TMEM242Q9NWH2 141 aa12.59□□□□□ -0.39
SERF1A-201ENST00000317633 A0A1B0GUT8 65 aa12.58□□□□□ -0.4
SERF1A-201ENST00000317633 ZNF561-AS1K7EIQ3 104 aa12.58□□□□□ -0.4
SERF1A-201ENST00000317633 CD164L2Q6UWJ8 174 aa12.58□□□□□ -0.4
SERF1A-201ENST00000317633 MRPL52Q86TS9 123 aaKnown RBP12.58□□□□□ -0.4
SERF1A-201ENST00000317633 CDC42SE2Q9NRR3 84 aa12.58□□□□□ -0.4
SERF1A-201ENST00000317633 ZNF664Q8N3J9 261 aa12.57□□□□□ -0.4
SERF1A-201ENST00000317633 TRBV27A0A0K0K1C4 114 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 HIGD1CA8MV81 97 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 GAS8-AS1O95177 125 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 POLR2KP53803 58 aaKnown RBP12.56□□□□□ -0.4
SERF1A-201ENST00000317633 SYCNQ0VAF6 134 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 ALKAL2Q6UX46 152 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 TSKUQ8WUA8 353 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 LINC00526Q96FQ7 95 aa12.56□□□□□ -0.4
SERF1A-201ENST00000317633 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
SERF1A-201ENST00000317633 SPINK6Q6UWN8 80 aa12.55□□□□□ -0.4
SERF1A-201ENST00000317633 ISOC2Q96AB3 205 aa12.55□□□□□ -0.4
SERF1A-201ENST00000317633 SMIM7Q9BQ49 75 aa12.55□□□□□ -0.4
SERF1A-201ENST00000317633 TNXBP22105 4242 aa12.55□□□□□ -0.4
SERF1A-201ENST00000317633 RAB4AP20338 218 aa12.54□□□□□ -0.4
SERF1A-201ENST00000317633 REG3GQ6UW15 175 aa12.54□□□□□ -0.4
SERF1A-201ENST00000317633 VCYO14598 125 aa12.53□□□□□ -0.4
SERF1A-201ENST00000317633 PPP1R17O96001 155 aa12.53□□□□□ -0.4
SERF1A-201ENST00000317633 MALP21145 153 aa12.53□□□□□ -0.4
SERF1A-201ENST00000317633 EIF5A2Q9GZV4 153 aaKnown RBP12.53□□□□□ -0.4
SERF1A-201ENST00000317633 OSTCQ9NRP0 149 aa12.53□□□□□ -0.4
SERF1A-201ENST00000317633 C1orf196B1AJZ1 125 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 FCER1GP30273 86 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 CAMPP49913 170 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 Q6ZRP5 223 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 LINC01551Q86U37 167 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 AMN1Q8IY45 258 aa12.52□□□□□ -0.41
SERF1A-201ENST00000317633 A0A0J9YXV3 536 aa12.51□□□□□ -0.41
SERF1A-201ENST00000317633 RIGQ13278 110 aa12.51□□□□□ -0.41
SERF1A-201ENST00000317633 LOC107984640A0A0U1RRK4 108 aa12.5□□□□□ -0.41
SERF1A-201ENST00000317633 ZNF727A8MUV8 499 aa12.5□□□□□ -0.41
SERF1A-201ENST00000317633 AKAP14Q86UN6 197 aa12.5□□□□□ -0.41
SERF1A-201ENST00000317633 KIR2DL4Q99706 377 aa12.5□□□□□ -0.41
SERF1A-201ENST00000317633 CSDC2Q9Y534 153 aaKnown RBP12.5□□□□□ -0.41
SERF1A-201ENST00000317633 COX7A2LO14548 114 aa12.49□□□□□ -0.41
SERF1A-201ENST00000317633 PTTG1IPP53801 180 aa12.49□□□□□ -0.41
SERF1A-201ENST00000317633 IGLV4-69A0A075B6H9 119 aa12.48□□□□□ -0.41
SERF1A-201ENST00000317633 SUMO2P61956 95 aaKnown RBP12.48□□□□□ -0.41
SERF1A-201ENST00000317633 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
SERF1A-201ENST00000317633 CAMK2N2Q96S95 79 aa12.47□□□□□ -0.41
SERF1A-201ENST00000317633 UBE2D4Q9Y2X8 147 aa12.47□□□□□ -0.41
SERF1A-201ENST00000317633 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
SERF1A-201ENST00000317633 PPP1R2P9O14990 202 aa12.46□□□□□ -0.41
SERF1A-201ENST00000317633 SRSF9Q13242 221 aaKnown RBP eCLIP12.46□□□□□ -0.41
SERF1A-201ENST00000317633 NUP35Q8NFH5 326 aa12.46□□□□□ -0.41
SERF1A-201ENST00000317633 TMEM18Q96B42 140 aa12.46□□□□□ -0.41
SERF1A-201ENST00000317633 APOMO95445 188 aa12.45□□□□□ -0.42
SERF1A-201ENST00000317633 KRTAP10-8P60410 259 aa12.45□□□□□ -0.42
SERF1A-201ENST00000317633 NRACQ8N912 160 aa12.45□□□□□ -0.42
SERF1A-201ENST00000317633 C2orf48Q96LS8 159 aa12.45□□□□□ -0.42
SERF1A-201ENST00000317633 V9GYV3 84 aa12.45□□□□□ -0.42
SERF1A-201ENST00000317633 TRAV13-1A0A0B4J241 112 aa12.44□□□□□ -0.42
SERF1A-201ENST00000317633 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
SERF1A-201ENST00000317633 NAT8BQ9UHF3 227 aa12.44□□□□□ -0.42
SERF1A-201ENST00000317633 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
SERF1A-201ENST00000317633 TIMM21Q9BVV7 248 aa12.43□□□□□ -0.42
SERF1A-201ENST00000317633 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
SERF1A-201ENST00000317633 LINC00862A6NCI5 91 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 TCAPO15273 167 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 TMEM241Q24JQ0 296 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 C5orf38Q86SI9 138 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 C20orf78Q9BR46 151 aa12.41□□□□□ -0.42
SERF1A-201ENST00000317633 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.42
SERF1A-201ENST00000317633 MRPL51Q4U2R6 128 aaKnown RBP12.4□□□□□ -0.42
SERF1A-201ENST00000317633 Q6ZUT4 128 aa12.4□□□□□ -0.42
SERF1A-201ENST00000317633 A0A1W2PNN7 141 aa12.39□□□□□ -0.43
SERF1A-201ENST00000317633 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.39□□□□□ -0.43
SERF1A-201ENST00000317633 ODF1Q14990 250 aa12.39□□□□□ -0.43
SERF1A-201ENST00000317633 RNF151Q2KHN1 245 aa12.39□□□□□ -0.43
SERF1A-201ENST00000317633 OR10D4PQ8NGN7 298 aa12.39□□□□□ -0.43
SERF1A-201ENST00000317633 LRP2P98164 4655 aa12.38□□□□□ -0.43
SERF1A-201ENST00000317633 A0A1B0GW15 77 aa12.38□□□□□ -0.43
SERF1A-201ENST00000317633 MT-ND6P03923 174 aa12.38□□□□□ -0.43
SERF1A-201ENST00000317633 CKS2P33552 79 aa12.38□□□□□ -0.43
SERF1A-201ENST00000317633 RPL23P62829 140 aaKnown RBP12.38□□□□□ -0.43
SERF1A-201ENST00000317633 RPL32P62910 135 aaKnown RBP12.38□□□□□ -0.43
SERF1A-201ENST00000317633 SPAG11BQ08648 103 aa12.38□□□□□ -0.43
SERF1A-201ENST00000317633 C9orf116Q5BN46 136 aaPredicted RBP12.38□□□□□ -0.43
SERF1A-201ENST00000317633 hCG_2014768A0A024R1R8 64 aa12.37□□□□□ -0.43
SERF1A-201ENST00000317633 TRBV24-1A0A075B6N3 115 aa12.37□□□□□ -0.43
SERF1A-201ENST00000317633 ADIRFQ15847 76 aa12.37□□□□□ -0.43
SERF1A-201ENST00000317633 PSORS1C2Q9UIG4 136 aa12.37□□□□□ -0.43
SERF1A-201ENST00000317633 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
SERF1A-201ENST00000317633 F8WDY8 70 aa12.36□□□□□ -0.43
SERF1A-201ENST00000317633 NAT8Q9UHE5 227 aa12.36□□□□□ -0.43
SERF1A-201ENST00000317633 IMMP2LQ96T52 175 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms