RNA–Protein interactions for RNA: ENST00000307301.11

MRPL39-201, Transcript of mitochondrial ribosomal protein L39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MRPL39, Length 1,199 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39-201ENST00000307301 UQCC3Q6UW78 93 aa13.5□□□□□ -0.25
MRPL39-201ENST00000307301 CLRN3Q8NCR9 226 aa13.5□□□□□ -0.25
MRPL39-201ENST00000307301 CHCHD10Q8WYQ3 142 aaPredicted RBP13.5□□□□□ -0.25
MRPL39-201ENST00000307301 hDV102S1A0JD36 115 aa13.49□□□□□ -0.25
MRPL39-201ENST00000307301 ADCYAP1P18509 176 aa13.49□□□□□ -0.25
MRPL39-201ENST00000307301 DGAT2L7PQ6IED9 249 aa13.49□□□□□ -0.25
MRPL39-201ENST00000307301 NPYP01303 97 aa13.48□□□□□ -0.25
MRPL39-201ENST00000307301 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
MRPL39-201ENST00000307301 CDC42SE2Q9NRR3 84 aa13.48□□□□□ -0.25
MRPL39-201ENST00000307301 TMEM218A2RU14 115 aa13.47□□□□□ -0.25
MRPL39-201ENST00000307301 SMIM2Q9BVW6 85 aa13.47□□□□□ -0.25
MRPL39-201ENST00000307301 LINC00959A0A1B0GUT2 108 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 PPBPP02775 128 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 SCXQ7RTU7 201 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 ZNF664Q8N3J9 261 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 C15orf56Q8N910 161 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 C9orf163Q8N9P6 203 aa13.46□□□□□ -0.25
MRPL39-201ENST00000307301 DNAH8Q96JB1 4490 aa13.45□□□□□ -0.26
MRPL39-201ENST00000307301 ORMDL3Q8N138 153 aa13.45□□□□□ -0.26
MRPL39-201ENST00000307301 UBE2D4Q9Y2X8 147 aa13.45□□□□□ -0.26
MRPL39-201ENST00000307301 FAM229AH3BQW9 127 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 PHOX2AO14813 284 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 CCL25O15444 150 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 XCL1P47992 114 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 CNBPP62633 177 aaKnown RBP13.44□□□□□ -0.26
MRPL39-201ENST00000307301 FOXI1Q12951 378 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 TMEM136Q6ZRR5 245 aa13.44□□□□□ -0.26
MRPL39-201ENST00000307301 COMMD7Q86VX2 200 aa13.43□□□□□ -0.26
MRPL39-201ENST00000307301 PRELID3AQ96N28 172 aa13.43□□□□□ -0.26
MRPL39-201ENST00000307301 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
MRPL39-201ENST00000307301 AP5S1Q9NUS5 200 aa13.43□□□□□ -0.26
MRPL39-201ENST00000307301 CSDC2Q9Y534 153 aaKnown RBP13.43□□□□□ -0.26
MRPL39-201ENST00000307301 TCAPO15273 167 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 SLPIP03973 132 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 SMAGPQ0VAQ4 97 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 SS18Q15532 418 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 RNASE13Q5GAN3 156 aaKnown RBP13.42□□□□□ -0.26
MRPL39-201ENST00000307301 CFAP161Q6P656 301 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 TMEM18Q96B42 140 aa13.42□□□□□ -0.26
MRPL39-201ENST00000307301 HIGD2BQ4VC39 106 aa13.41□□□□□ -0.26
MRPL39-201ENST00000307301 RPL39P62891 51 aaKnown RBP13.4□□□□□ -0.26
MRPL39-201ENST00000307301 Q6ZUT4 128 aa13.4□□□□□ -0.26
MRPL39-201ENST00000307301 CIRBP-AS1Q8TBR5 109 aa13.4□□□□□ -0.26
MRPL39-201ENST00000307301 TIMM21Q9BVV7 248 aa13.4□□□□□ -0.26
MRPL39-201ENST00000307301 SEC11CQ9BY50 192 aa13.4□□□□□ -0.26
MRPL39-201ENST00000307301 FAT1Q14517 4588 aa13.39□□□□□ -0.27
MRPL39-201ENST00000307301 INAFM2P0DMQ5 153 aa13.39□□□□□ -0.27
MRPL39-201ENST00000307301 SDIM1Q6ZPB5 146 aa13.39□□□□□ -0.27
MRPL39-201ENST00000307301 LINC00528Q8N1L1 170 aa13.39□□□□□ -0.27
MRPL39-201ENST00000307301 IMMP2LQ96T52 175 aa13.39□□□□□ -0.27
MRPL39-201ENST00000307301 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.38□□□□□ -0.27
MRPL39-201ENST00000307301 CTDSP1Q9GZU7 261 aa13.38□□□□□ -0.27
MRPL39-201ENST00000307301 SRRM2Q9UQ35 2752 aaKnown RBP13.37□□□□□ -0.27
MRPL39-201ENST00000307301 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
MRPL39-201ENST00000307301 CD164L2Q6UWJ8 174 aa13.37□□□□□ -0.27
MRPL39-201ENST00000307301 LAMTOR2Q9Y2Q5 125 aa13.37□□□□□ -0.27
MRPL39-201ENST00000307301 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.37□□□□□ -0.27
MRPL39-201ENST00000307301 IGHV3-64A0A075B6Q5 118 aa13.36□□□□□ -0.27
MRPL39-201ENST00000307301 LOC389332A0A1B0GUA5 103 aa13.36□□□□□ -0.27
MRPL39-201ENST00000307301 VPS13BQ7Z7G8 4022 aa13.36□□□□□ -0.27
MRPL39-201ENST00000307301 TRAV13-1A0A0B4J241 112 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 PRSS47A8MTI9 375 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 C1orf196B1AJZ1 125 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 PANO1I0J062 215 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 RAB5AP20339 215 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 MAP1LC3AQ9H492 121 aa13.35□□□□□ -0.27
MRPL39-201ENST00000307301 IGHV1-58A0A0C4DH39 117 aa13.34□□□□□ -0.27
MRPL39-201ENST00000307301 FAM104AQ969W3 186 aa13.34□□□□□ -0.27
MRPL39-201ENST00000307301 OPRPNQ99935 248 aaPredicted RBP13.34□□□□□ -0.27
MRPL39-201ENST00000307301 SPANXA1Q9NS26 97 aa13.34□□□□□ -0.27
MRPL39-201ENST00000307301 PLA2G1BP04054 148 aaKnown RBP13.33□□□□□ -0.28
MRPL39-201ENST00000307301 TRAV9-1A0A075B6T8 112 aa13.32□□□□□ -0.28
MRPL39-201ENST00000307301 C10orf91Q5T1B1 145 aa13.32□□□□□ -0.28
MRPL39-201ENST00000307301 MRPS36P82909 103 aaKnown RBP13.31□□□□□ -0.28
MRPL39-201ENST00000307301 Q8N8P6 123 aa13.31□□□□□ -0.28
MRPL39-201ENST00000307301 LINC00526Q96FQ7 95 aa13.31□□□□□ -0.28
MRPL39-201ENST00000307301 COX7A2LO14548 114 aa13.3□□□□□ -0.28
MRPL39-201ENST00000307301 CHTF8P0CG12 524 aa13.3□□□□□ -0.28
MRPL39-201ENST00000307301 S100PP25815 95 aa13.3□□□□□ -0.28
MRPL39-201ENST00000307301 CARHSP1Q9Y2V2 147 aaKnown RBP13.3□□□□□ -0.28
MRPL39-201ENST00000307301 CIRBPQ14011 172 aaKnown RBP13.29□□□□□ -0.28
MRPL39-201ENST00000307301 KIAA1644Q3SXP7 199 aa13.29□□□□□ -0.28
MRPL39-201ENST00000307301 MALP21145 153 aa13.28□□□□□ -0.28
MRPL39-201ENST00000307301 IFI27P40305 119 aaPredicted RBP13.28□□□□□ -0.28
MRPL39-201ENST00000307301 COX6A2Q02221 97 aa13.28□□□□□ -0.28
MRPL39-201ENST00000307301 IFITM10A6NMD0 228 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 C5orf38Q86SI9 138 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 RPS10P5Q9NQ39 176 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 PYGO1Q9Y3Y4 419 aa13.27□□□□□ -0.29
MRPL39-201ENST00000307301 IGLV4-3A0A075B6K6 122 aa13.26□□□□□ -0.29
MRPL39-201ENST00000307301 RHEBQ15382 184 aa13.26□□□□□ -0.29
MRPL39-201ENST00000307301 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
MRPL39-201ENST00000307301 KRTAP10-4P60372 401 aaPredicted RBP13.25□□□□□ -0.29
MRPL39-201ENST00000307301 DPH3Q96FX2 82 aa13.25□□□□□ -0.29
MRPL39-201ENST00000307301 CARD19Q96LW7 228 aa13.25□□□□□ -0.29
MRPL39-201ENST00000307301 NXT2Q9NPJ8 142 aaKnown RBP13.25□□□□□ -0.29
MRPL39-201ENST00000307301 ORMDL2Q53FV1 153 aa13.24□□□□□ -0.29
MRPL39-201ENST00000307301 C2orf66Q6UXQ4 117 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms