RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 RIGQ13278 110 aa7.22□□□□□ -1.25
CLCC1-201ENST00000302500 C14orf177Q52M58 125 aa7.22□□□□□ -1.25
CLCC1-201ENST00000302500 SMIM15Q7Z3B0 74 aa7.22□□□□□ -1.25
CLCC1-201ENST00000302500 CDC42SE2Q9NRR3 84 aa7.22□□□□□ -1.25
CLCC1-201ENST00000302500 TNXBP22105 4242 aa7.21□□□□□ -1.26
CLCC1-201ENST00000302500 EIF4EBP3O60516 100 aaPredicted RBP7.21□□□□□ -1.26
CLCC1-201ENST00000302500 SUMO2P61956 95 aaKnown RBP7.21□□□□□ -1.26
CLCC1-201ENST00000302500 ST20Q9HBF5 79 aa7.21□□□□□ -1.26
CLCC1-201ENST00000302500 CSDC2Q9Y534 153 aaKnown RBP7.21□□□□□ -1.26
CLCC1-201ENST00000302500 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.21□□□□□ -1.26
CLCC1-201ENST00000302500 TMEM238LA0A1B0GVL6 79 aa7.2□□□□□ -1.26
CLCC1-201ENST00000302500 A0A1B0GW15 77 aa7.2□□□□□ -1.26
CLCC1-201ENST00000302500 CLRN3Q8NCR9 226 aa7.2□□□□□ -1.26
CLCC1-201ENST00000302500 OR5A1Q8NGJ0 315 aa7.2□□□□□ -1.26
CLCC1-201ENST00000302500 UBE2D4Q9Y2X8 147 aa7.2□□□□□ -1.26
CLCC1-201ENST00000302500 GVQW2A0A096LPI5 108 aaPredicted RBP7.19□□□□□ -1.26
CLCC1-201ENST00000302500 LINC00862A6NCI5 91 aa7.19□□□□□ -1.26
CLCC1-201ENST00000302500 PMCHP20382 165 aa7.19□□□□□ -1.26
CLCC1-201ENST00000302500 CHCHD10Q8WYQ3 142 aaPredicted RBP7.19□□□□□ -1.26
CLCC1-201ENST00000302500 BORCS7Q96B45 105 aa7.19□□□□□ -1.26
CLCC1-201ENST00000302500 C20orf78Q9BR46 151 aa7.19□□□□□ -1.26
CLCC1-201ENST00000302500 LINC00959A0A1B0GUT2 108 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 GAGE12HA6NDE8 117 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 PRSS47A8MTI9 375 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 VCYO14598 125 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 UBE2L6O14933 153 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 NPYP01303 97 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 CAMPP49913 170 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 HBBP68871 147 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 ATP5L2Q7Z4Y8 100 aa7.18□□□□□ -1.26
CLCC1-201ENST00000302500 C7orf77A4D0Y5 90 aa7.17□□□□□ -1.26
CLCC1-201ENST00000302500 TNFRSF6BO95407 300 aa7.17□□□□□ -1.26
CLCC1-201ENST00000302500 PNRC1Q12796 327 aaPredicted RBP7.17□□□□□ -1.26
CLCC1-201ENST00000302500 MRPL54Q6P161 138 aaKnown RBP7.17□□□□□ -1.26
CLCC1-201ENST00000302500 TIMM21Q9BVV7 248 aa7.17□□□□□ -1.26
CLCC1-201ENST00000302500 HMCN2Q8NDA2 5059 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 D6R8Y8 96 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 PHOX2AO14813 284 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 PPP1R17O96001 155 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 ZNF664Q8N3J9 261 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
CLCC1-201ENST00000302500 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
CLCC1-201ENST00000302500 PPP1R2P9O14990 202 aa7.15□□□□□ -1.26
CLCC1-201ENST00000302500 HNRNPA3P51991 378 aaKnown RBP7.15□□□□□ -1.26
CLCC1-201ENST00000302500 RNASEKQ6P5S7 137 aaKnown RBP7.15□□□□□ -1.26
CLCC1-201ENST00000302500 SPACA4Q8TDM5 124 aa7.15□□□□□ -1.26
CLCC1-201ENST00000302500 hDV102S1A0JD36 115 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 CCL25O15444 150 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 RPL39P62891 51 aaKnown RBP7.14□□□□□ -1.27
CLCC1-201ENST00000302500 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 AMMECR1LQ6DCA0 310 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 Q6ZUT4 128 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 ANAPC16Q96DE5 110 aa7.14□□□□□ -1.27
CLCC1-201ENST00000302500 TMEM218A2RU14 115 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 PPBPP02775 128 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 CHTF8P0CG12 524 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 CKS2P33552 79 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 UQCC3Q6UW78 93 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 CD164L2Q6UWJ8 174 aa7.13□□□□□ -1.27
CLCC1-201ENST00000302500 IGKV3OR2-268A0A0C4DH90 116 aa7.12□□□□□ -1.27
CLCC1-201ENST00000302500 XCL1P47992 114 aa7.12□□□□□ -1.27
CLCC1-201ENST00000302500 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
CLCC1-201ENST00000302500 PLAC8Q9NZF1 115 aa7.12□□□□□ -1.27
CLCC1-201ENST00000302500 F8W036 122 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 S100A8P05109 93 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 HIGD2BQ4VC39 106 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 RNASE13Q5GAN3 156 aaKnown RBP7.11□□□□□ -1.27
CLCC1-201ENST00000302500 ORMDL3Q8N138 153 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 PRSS3P2Q8NHM4 247 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 IMMP2LQ96T52 175 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 KIR2DL4Q99706 377 aa7.11□□□□□ -1.27
CLCC1-201ENST00000302500 OPRPNQ99935 248 aaPredicted RBP7.11□□□□□ -1.27
CLCC1-201ENST00000302500 IGHV3-64A0A075B6Q5 118 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 IGHV3OR16-9A0A0B4J2B5 98 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 KRTAP29-1A8MX34 341 aaPredicted RBP7.1□□□□□ -1.27
CLCC1-201ENST00000302500 TCAPO15273 167 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 RAB14P61106 215 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 TMEM136Q6ZRR5 245 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 LINC00526Q96FQ7 95 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 TMEM101Q96IK0 257 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 SEC11CQ9BY50 192 aa7.1□□□□□ -1.27
CLCC1-201ENST00000302500 A0A087WYN8 130 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 MT-ND4LP03901 98 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 PLA2G1BP04054 148 aaKnown RBP7.09□□□□□ -1.27
CLCC1-201ENST00000302500 FCER1GP30273 86 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 LINC00173Q6ZV60 143 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 BTF3L4Q96K17 158 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 PRELID3AQ96N28 172 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 SPANXA1Q9NS26 97 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 LAMTOR2Q9Y2Q5 125 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
CLCC1-201ENST00000302500 A0A096LNI7 61 aa7.08□□□□□ -1.28
CLCC1-201ENST00000302500 IGHV1-58A0A0C4DH39 117 aa7.08□□□□□ -1.28
CLCC1-201ENST00000302500 C1orf196B1AJZ1 125 aa7.08□□□□□ -1.28
CLCC1-201ENST00000302500 COX6A2Q02221 97 aa7.08□□□□□ -1.28
CLCC1-201ENST00000302500 CFAP161Q6P656 301 aa7.08□□□□□ -1.28
CLCC1-201ENST00000302500 CARHSP1Q9Y2V2 147 aaKnown RBP7.08□□□□□ -1.28
CLCC1-201ENST00000302500 IGLV4-3A0A075B6K6 122 aa7.07□□□□□ -1.28
CLCC1-201ENST00000302500 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms