RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 LINC01556Q5JQF7 62 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 AMN1Q8IY45 258 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 C9orf85Q96MD7 179 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 C20orf78Q9BR46 151 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 MIEN1Q9BRT3 115 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 DPH3P1Q9H4G8 78 aa5.83□□□□□ -1.48
TFF1-201ENST00000291527 LINC00587B1AMM8 73 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 ZNF876PQ49A33 203 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 DAZ4Q86SG3 579 aaKnown RBP5.82□□□□□ -1.48
TFF1-201ENST00000291527 FAM19A2Q8N3H0 131 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 C14orf178Q8N769 122 aaPredicted RBP5.82□□□□□ -1.48
TFF1-201ENST00000291527 Q8N8P6 123 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 ST20Q9HBF5 79 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 DAZ3Q9NR90 486 aaKnown RBP5.82□□□□□ -1.48
TFF1-201ENST00000291527 UQCR10Q9UDW1 63 aa5.82□□□□□ -1.48
TFF1-201ENST00000291527 GAGE12JA6NER3 117 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 PSCAO43653 123 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 ATP5LO75964 103 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 TNFRSF6BO95407 300 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 LINC00694P0DN24 101 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 TIRAPP58753 221 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 KRTAP10-4P60372 401 aaPredicted RBP5.81□□□□□ -1.48
TFF1-201ENST00000291527 CTAG1AP78358 180 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 GAGE1Q13065 139 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 GAGE4Q13068 117 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 GAGE5Q13069 117 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 GAGE13Q4V321 117 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 ORMDL2Q53FV1 153 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 PIK3CD-AS1Q5SR53 167 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 PMCHL2Q9BQD1 86 aa5.81□□□□□ -1.48
TFF1-201ENST00000291527 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.8□□□□□ -1.48
TFF1-201ENST00000291527 FAM229AH3BQW9 127 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 H3BVH4 76 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 M0R143 59 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 FCER1GP30273 86 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 RPL32P62910 135 aaKnown RBP5.8□□□□□ -1.48
TFF1-201ENST00000291527 SPATA45Q537H7 98 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 LELP1Q5T871 98 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 UFSP1Q6NVU6 142 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 Q6ZSA8 131 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 ATP6V0E2Q8NHE4 81 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 NTN5Q8WTR8 489 aaPredicted RBP5.8□□□□□ -1.48
TFF1-201ENST00000291527 BAALCQ8WXS3 180 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 URB1-AS1Q96HZ7 61 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 PRO1933Q9H354 126 aa5.8□□□□□ -1.48
TFF1-201ENST00000291527 TRBV6-4A0A1B0GX49 114 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 IFI27P40305 119 aaPredicted RBP5.79□□□□□ -1.48
TFF1-201ENST00000291527 LAGE3Q14657 143 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 LINC01545Q5VT33 79 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 C10orf126Q8N4M7 172 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 PTH2Q96A98 100 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 RNF185Q96GF1 192 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 C14orf144Q96I85 54 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 GTSF1LQ9H1H1 148 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 PAM16Q9Y3D7 125 aa5.79□□□□□ -1.48
TFF1-201ENST00000291527 TRAV8-6A0A0B4J262 113 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 LOC389332A0A1B0GUA5 103 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 H7C1H1 209 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 K7EP13 123 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 NPYP01303 97 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 RHOHQ15669 191 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 LINC00528Q8N1L1 170 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 Q8N976 141 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 PRADC1Q9BSG0 188 aa5.78□□□□□ -1.48
TFF1-201ENST00000291527 IGLC3P0DOY3 106 aa5.77□□□□□ -1.49
TFF1-201ENST00000291527 HNRNPA3P51991 378 aaKnown RBP5.77□□□□□ -1.49
TFF1-201ENST00000291527 SUMO2P61956 95 aaKnown RBP5.77□□□□□ -1.49
TFF1-201ENST00000291527 SCXQ7RTU7 201 aa5.77□□□□□ -1.49
TFF1-201ENST00000291527 IFI27L1Q96BM0 104 aa5.77□□□□□ -1.49
TFF1-201ENST00000291527 C2orf88Q9BSF0 95 aa5.77□□□□□ -1.49
TFF1-201ENST00000291527 TNXBP22105 4242 aa5.77□□□□□ -1.49
TFF1-201ENST00000291527 A8MWV9 139 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 J3QL48 77 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 SSTP61278 116 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 SH2D6Q7Z4S9 175 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 NRACQ8N912 160 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 SMIM2Q9BVW6 85 aa5.76□□□□□ -1.49
TFF1-201ENST00000291527 A0A087WWL8 130 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 MUC21A0A0G2JKD1 596 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 TRBV6-5A0A0K0K1A5 114 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 MUC21A0A140T8X8 626 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 KRTAP29-1A8MX34 341 aaPredicted RBP5.75□□□□□ -1.49
TFF1-201ENST00000291527 RHODO00212 210 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 VCYO14598 125 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 NCR2O95944 276 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 SLC25A34Q6PIV7 304 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 Q6ZN92 141 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 KIR2DL4Q99706 377 aa5.75□□□□□ -1.49
TFF1-201ENST00000291527 TRAV12-1A0A0B4J245 112 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.74□□□□□ -1.49
TFF1-201ENST00000291527 CIDEAO60543 219 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 MGPP08493 103 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 PLNP26678 52 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 PAPPA-AS1Q5QFB9 102 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 CIRBP-AS1Q8TBR5 109 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 KLK12Q9UKR0 248 aa5.74□□□□□ -1.49
TFF1-201ENST00000291527 SMKR1H3BMG3 65 aa5.73□□□□□ -1.49
TFF1-201ENST00000291527 PANO1I0J062 215 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms