RNA–Protein interactions for RNA: ENST00000288398.10

TPM1-202, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-202ENST00000288398 FOXI1Q12951 378 aa8.87□□□□□ -0.99
TPM1-202ENST00000288398 ALKAL2Q6UX46 152 aa8.87□□□□□ -0.99
TPM1-202ENST00000288398 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
TPM1-202ENST00000288398 SMIM7Q9BQ49 75 aa8.87□□□□□ -0.99
TPM1-202ENST00000288398 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
TPM1-202ENST00000288398 HIGD1CA8MV81 97 aa8.86□□□□□ -0.99
TPM1-202ENST00000288398 MALP21145 153 aa8.86□□□□□ -0.99
TPM1-202ENST00000288398 FCER1GP30273 86 aa8.86□□□□□ -0.99
TPM1-202ENST00000288398 A0A096LNI7 61 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 C7orf77A4D0Y5 90 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 TSHBP01222 138 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 PRR3P79522 188 aaKnown RBP8.85□□□□□ -0.99
TPM1-202ENST00000288398 TSKUQ8WUA8 353 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 ISOC2Q96AB3 205 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
TPM1-202ENST00000288398 PPP1R17O96001 155 aa8.84□□□□□ -0.99
TPM1-202ENST00000288398 MT1HL1P0DM35 61 aa8.84□□□□□ -0.99
TPM1-202ENST00000288398 RIGQ13278 110 aa8.84□□□□□ -0.99
TPM1-202ENST00000288398 NDUFA5Q16718 116 aa8.84□□□□□ -0.99
TPM1-202ENST00000288398 CD164L2Q6UWJ8 174 aa8.84□□□□□ -0.99
TPM1-202ENST00000288398 FAM231BA6NCW3 169 aa8.83□□□□□ -1
TPM1-202ENST00000288398 ZNF727A8MUV8 499 aa8.83□□□□□ -1
TPM1-202ENST00000288398 VCYO14598 125 aa8.83□□□□□ -1
TPM1-202ENST00000288398 ESDP10768 282 aa8.83□□□□□ -1
TPM1-202ENST00000288398 SYCNQ0VAF6 134 aa8.83□□□□□ -1
TPM1-202ENST00000288398 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
TPM1-202ENST00000288398 ZNF664Q8N3J9 261 aa8.83□□□□□ -1
TPM1-202ENST00000288398 KIR2DL4Q99706 377 aa8.83□□□□□ -1
TPM1-202ENST00000288398 TRBV27A0A0K0K1C4 114 aa8.82□□□□□ -1
TPM1-202ENST00000288398 COX7A2LO14548 114 aa8.82□□□□□ -1
TPM1-202ENST00000288398 CAMPP49913 170 aa8.82□□□□□ -1
TPM1-202ENST00000288398 REG3GQ6UW15 175 aa8.82□□□□□ -1
TPM1-202ENST00000288398 LINC01551Q86U37 167 aa8.82□□□□□ -1
TPM1-202ENST00000288398 AMN1Q8IY45 258 aa8.82□□□□□ -1
TPM1-202ENST00000288398 LINC00526Q96FQ7 95 aa8.82□□□□□ -1
TPM1-202ENST00000288398 OSTCQ9NRP0 149 aa8.82□□□□□ -1
TPM1-202ENST00000288398 CDC42SE2Q9NRR3 84 aa8.82□□□□□ -1
TPM1-202ENST00000288398 C1orf196B1AJZ1 125 aa8.81□□□□□ -1
TPM1-202ENST00000288398 RAB4AP20338 218 aa8.81□□□□□ -1
TPM1-202ENST00000288398 TMEM18Q96B42 140 aa8.81□□□□□ -1
TPM1-202ENST00000288398 LOC107984640A0A0U1RRK4 108 aa8.8□□□□□ -1
TPM1-202ENST00000288398 PPP1R2P9O14990 202 aa8.8□□□□□ -1
TPM1-202ENST00000288398 GAS8-AS1O95177 125 aa8.8□□□□□ -1
TPM1-202ENST00000288398 POLR2KP53803 58 aaKnown RBP8.8□□□□□ -1
TPM1-202ENST00000288398 CLLU1Q5K131 121 aa8.8□□□□□ -1
TPM1-202ENST00000288398 SPINK6Q6UWN8 80 aa8.8□□□□□ -1
TPM1-202ENST00000288398 Q6ZRP5 223 aa8.8□□□□□ -1
TPM1-202ENST00000288398 APOMO95445 188 aa8.79□□□□□ -1
TPM1-202ENST00000288398 SUMO2P61956 95 aaKnown RBP8.79□□□□□ -1
TPM1-202ENST00000288398 GAGE2BQ13066 116 aa8.79□□□□□ -1
TPM1-202ENST00000288398 LINC01600Q96MT4 127 aa8.79□□□□□ -1
TPM1-202ENST00000288398 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
TPM1-202ENST00000288398 IGLV4-69A0A075B6H9 119 aa8.78□□□□□ -1
TPM1-202ENST00000288398 TRAV13-1A0A0B4J241 112 aa8.78□□□□□ -1
TPM1-202ENST00000288398 LINC00862A6NCI5 91 aa8.78□□□□□ -1
TPM1-202ENST00000288398 SMKR1H3BMG3 65 aa8.78□□□□□ -1
TPM1-202ENST00000288398 NAT8BQ9UHF3 227 aa8.78□□□□□ -1
TPM1-202ENST00000288398 UBR4Q5T4S7 5183 aa8.78□□□□□ -1
TPM1-202ENST00000288398 TCAPO15273 167 aa8.77□□□□□ -1.01
TPM1-202ENST00000288398 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
TPM1-202ENST00000288398 NUP35Q8NFH5 326 aa8.77□□□□□ -1.01
TPM1-202ENST00000288398 CSDC2Q9Y534 153 aaKnown RBP8.77□□□□□ -1.01
TPM1-202ENST00000288398 SRP19P09132 144 aaKnown RBP8.76□□□□□ -1.01
TPM1-202ENST00000288398 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
TPM1-202ENST00000288398 TMEM241Q24JQ0 296 aa8.76□□□□□ -1.01
TPM1-202ENST00000288398 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
TPM1-202ENST00000288398 RNASE13Q5GAN3 156 aaKnown RBP8.76□□□□□ -1.01
TPM1-202ENST00000288398 UBE2D4Q9Y2X8 147 aa8.76□□□□□ -1.01
TPM1-202ENST00000288398 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
TPM1-202ENST00000288398 CKS2P33552 79 aa8.75□□□□□ -1.01
TPM1-202ENST00000288398 ADIRFQ15847 76 aa8.75□□□□□ -1.01
TPM1-202ENST00000288398 V9GYV3 84 aa8.75□□□□□ -1.01
TPM1-202ENST00000288398 A0A1B0GW15 77 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 MT-ND6P03923 174 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 SPAG11BQ08648 103 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 C5orf38Q86SI9 138 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 NRACQ8N912 160 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 C2orf48Q96LS8 159 aa8.74□□□□□ -1.01
TPM1-202ENST00000288398 S100A8P05109 93 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 RAB14P61106 215 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 FAM104BQ5XKR9 115 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 Q6ZUT4 128 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 C20orf78Q9BR46 151 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 TIMM21Q9BVV7 248 aa8.73□□□□□ -1.01
TPM1-202ENST00000288398 F8W036 122 aa8.72□□□□□ -1.01
TPM1-202ENST00000288398 MRPL51Q4U2R6 128 aaKnown RBP8.72□□□□□ -1.01
TPM1-202ENST00000288398 OR10D4PQ8NGN7 298 aa8.72□□□□□ -1.01
TPM1-202ENST00000288398 NAT8Q9UHE5 227 aa8.72□□□□□ -1.01
TPM1-202ENST00000288398 RPL23P62829 140 aaKnown RBP8.71□□□□□ -1.02
TPM1-202ENST00000288398 S100A1P23297 94 aa8.7□□□□□ -1.02
TPM1-202ENST00000288398 PEA15Q15121 130 aa8.7□□□□□ -1.02
TPM1-202ENST00000288398 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
TPM1-202ENST00000288398 ORAOV1Q8WV07 137 aa8.7□□□□□ -1.02
TPM1-202ENST00000288398 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
TPM1-202ENST00000288398 SPANXA1Q9NS26 97 aa8.7□□□□□ -1.02
TPM1-202ENST00000288398 SMIM27A0A1W2PRY6 76 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 IFITM10A6NMD0 228 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 F8WDY8 70 aa8.69□□□□□ -1.02
TPM1-202ENST00000288398 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.69□□□□□ -1.02
TPM1-202ENST00000288398 ATP6V1G1O75348 118 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms