RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 LYPD6BQ8NI32 183 aa5.55□□□□□ -1.52
TPM3-201ENST00000271850 A0A0J9YXV3 536 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 BCL2P10415 239 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 FGF6P10767 208 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 SRSF9Q13242 221 aaKnown RBP eCLIP5.54□□□□□ -1.52
TPM3-201ENST00000271850 TWIST1Q15672 202 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 OCC1Q8TAD7 63 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 ANAPC16Q96DE5 110 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 DPH3Q96FX2 82 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 RPP21Q9H633 154 aaKnown RBP5.54□□□□□ -1.52
TPM3-201ENST00000271850 MED9Q9NWA0 146 aa5.54□□□□□ -1.52
TPM3-201ENST00000271850 SDHAF1A6NFY7 115 aa5.53□□□□□ -1.52
TPM3-201ENST00000271850 PDE6DO43924 150 aa5.53□□□□□ -1.52
TPM3-201ENST00000271850 TSHBP01222 138 aa5.53□□□□□ -1.52
TPM3-201ENST00000271850 ESDP10768 282 aa5.53□□□□□ -1.52
TPM3-201ENST00000271850 C7orf33Q8WU49 177 aa5.53□□□□□ -1.52
TPM3-201ENST00000271850 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 XKRY2A2RUG3 117 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 NCR2O95944 276 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 APCSP02743 223 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 XCL1P47992 114 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 RNASEKQ6P5S7 137 aaKnown RBP5.52□□□□□ -1.53
TPM3-201ENST00000271850 CFAP161Q6P656 301 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 OR5A1Q8NGJ0 315 aa5.52□□□□□ -1.53
TPM3-201ENST00000271850 TRBV6-5A0A0K0K1A5 114 aa5.51□□□□□ -1.53
TPM3-201ENST00000271850 A0A1W2PNN7 141 aa5.51□□□□□ -1.53
TPM3-201ENST00000271850 H7C423 109 aa5.51□□□□□ -1.53
TPM3-201ENST00000271850 CCL25O15444 150 aa5.51□□□□□ -1.53
TPM3-201ENST00000271850 EIF5AP63241 154 aaKnown RBP5.51□□□□□ -1.53
TPM3-201ENST00000271850 TMEM242Q9NWH2 141 aa5.51□□□□□ -1.53
TPM3-201ENST00000271850 POLR2KP53803 58 aaKnown RBP5.5□□□□□ -1.53
TPM3-201ENST00000271850 AMMECR1LQ6DCA0 310 aa5.5□□□□□ -1.53
TPM3-201ENST00000271850 SPINK6Q6UWN8 80 aa5.5□□□□□ -1.53
TPM3-201ENST00000271850 CDC42SE2Q9NRR3 84 aa5.5□□□□□ -1.53
TPM3-201ENST00000271850 MUC2Q02817 5179 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 I3L3M4 83 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
TPM3-201ENST00000271850 PTTG1IPP53801 180 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 CARD19Q96LW7 228 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 BIN3Q9NQY0 253 aa5.49□□□□□ -1.53
TPM3-201ENST00000271850 SMKR1H3BMG3 65 aa5.48□□□□□ -1.53
TPM3-201ENST00000271850 CD164L2Q6UWJ8 174 aa5.48□□□□□ -1.53
TPM3-201ENST00000271850 FAM231DQ6ZW35 169 aa5.48□□□□□ -1.53
TPM3-201ENST00000271850 MRPL52Q86TS9 123 aaKnown RBP5.48□□□□□ -1.53
TPM3-201ENST00000271850 KRTAP11-1Q8IUC1 163 aa5.48□□□□□ -1.53
TPM3-201ENST00000271850 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
TPM3-201ENST00000271850 IGLV4-69A0A075B6H9 119 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 TRBV27A0A0K0K1C4 114 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.47□□□□□ -1.53
TPM3-201ENST00000271850 GATCO43716 136 aaKnown RBP5.47□□□□□ -1.53
TPM3-201ENST00000271850 RAB4AP20338 218 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 PMCHP20382 165 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 CAMPP49913 170 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 SYCNQ0VAF6 134 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 RNASE13Q5GAN3 156 aaKnown RBP5.47□□□□□ -1.53
TPM3-201ENST00000271850 Q6ZRP5 223 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 SLC51BQ86UW2 128 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 TCTE3Q8IZS6 198 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 NUP35Q8NFH5 326 aa5.47□□□□□ -1.53
TPM3-201ENST00000271850 TEX46H3BTG2 121 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 GAGE2BQ13066 116 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 CT83Q5H943 113 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 EIF5AL1Q6IS14 154 aaKnown RBP5.46□□□□□ -1.54
TPM3-201ENST00000271850 AMN1Q8IY45 258 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 ZNF664Q8N3J9 261 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 NRACQ8N912 160 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 MRAP2Q96G30 205 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 TMEM191AQ9H0A3 160 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 PSORS1C2Q9UIG4 136 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 UBE2D4Q9Y2X8 147 aa5.46□□□□□ -1.54
TPM3-201ENST00000271850 C7orf77A4D0Y5 90 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 HIGD1CA8MV81 97 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 TMEM250H0YL14 139 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 C21orf62-AS1Q17RA5 79 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 REG3GQ6UW15 175 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 TEX261Q6UWH6 196 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 Q6ZUT4 128 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 PHF5AQ7RTV0 110 aaKnown RBP5.45□□□□□ -1.54
TPM3-201ENST00000271850 LINC01551Q86U37 167 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 KRTAP7-1Q8IUC3 87 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 TMEM101Q96IK0 257 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 ST20Q9HBF5 79 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 LINC00474Q9P2X8 69 aa5.45□□□□□ -1.54
TPM3-201ENST00000271850 A8MWL6 223 aa5.44□□□□□ -1.54
TPM3-201ENST00000271850 ZNF561-AS1K7EIQ3 104 aa5.44□□□□□ -1.54
TPM3-201ENST00000271850 TAGLN2P37802 199 aaKnown RBP5.44□□□□□ -1.54
TPM3-201ENST00000271850 SS18Q15532 418 aa5.44□□□□□ -1.54
TPM3-201ENST00000271850 C9orf116Q5BN46 136 aaPredicted RBP5.44□□□□□ -1.54
TPM3-201ENST00000271850 TSKUQ8WUA8 353 aa5.44□□□□□ -1.54
TPM3-201ENST00000271850 BTF3L4Q96K17 158 aa5.44□□□□□ -1.54
TPM3-201ENST00000271850 LOC107984640A0A0U1RRK4 108 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 A0A1B0GUT8 65 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 FAM168BA1KXE4 195 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 APOMO95445 188 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 ALKAL2Q6UX46 152 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 SMIM15Q7Z3B0 74 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 C5orf38Q86SI9 138 aa5.43□□□□□ -1.54
TPM3-201ENST00000271850 OPRPNQ99935 248 aaPredicted RBP5.43□□□□□ -1.54
TPM3-201ENST00000271850 CSDC2Q9Y534 153 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms