RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 MRPL52Q86TS9 123 aaKnown RBP11.72□□□□□ -0.53
SNRPA1-201ENST00000254193 Q8N1X5 172 aa11.72□□□□□ -0.53
SNRPA1-201ENST00000254193 GAGE12HA6NDE8 117 aa11.71□□□□□ -0.53
SNRPA1-201ENST00000254193 ORMDL3Q8N138 153 aa11.71□□□□□ -0.53
SNRPA1-201ENST00000254193 PRELID3AQ96N28 172 aa11.71□□□□□ -0.53
SNRPA1-201ENST00000254193 SMIM2Q9BVW6 85 aa11.71□□□□□ -0.53
SNRPA1-201ENST00000254193 CTDSP1Q9GZU7 261 aa11.71□□□□□ -0.53
SNRPA1-201ENST00000254193 PHOX2AO14813 284 aa11.7□□□□□ -0.54
SNRPA1-201ENST00000254193 CHCHD10Q8WYQ3 142 aaPredicted RBP11.7□□□□□ -0.54
SNRPA1-201ENST00000254193 IMMP2LQ96T52 175 aa11.7□□□□□ -0.54
SNRPA1-201ENST00000254193 DGAT2L7PQ6IED9 249 aa11.69□□□□□ -0.54
SNRPA1-201ENST00000254193 CDC42SE2Q9NRR3 84 aa11.69□□□□□ -0.54
SNRPA1-201ENST00000254193 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
SNRPA1-201ENST00000254193 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
SNRPA1-201ENST00000254193 LINC00959A0A1B0GUT2 108 aa11.67□□□□□ -0.54
SNRPA1-201ENST00000254193 TCAPO15273 167 aa11.67□□□□□ -0.54
SNRPA1-201ENST00000254193 C10orf91Q5T1B1 145 aa11.67□□□□□ -0.54
SNRPA1-201ENST00000254193 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
SNRPA1-201ENST00000254193 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
SNRPA1-201ENST00000254193 SMR3BP02814 79 aaPredicted RBP11.66□□□□□ -0.54
SNRPA1-201ENST00000254193 XCL1P47992 114 aa11.66□□□□□ -0.54
SNRPA1-201ENST00000254193 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-201ENST00000254193 CARHSP1Q9Y2V2 147 aaKnown RBP11.66□□□□□ -0.54
SNRPA1-201ENST00000254193 LOC389332A0A1B0GUA5 103 aa11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 CCL25O15444 150 aa11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 RPL39P62891 51 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 SMAGPQ0VAQ4 97 aa11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 Q6ZSA8 131 aa11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 TMEM18Q96B42 140 aa11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 CSDC2Q9Y534 153 aaKnown RBP11.65□□□□□ -0.54
SNRPA1-201ENST00000254193 FOXI1Q12951 378 aa11.64□□□□□ -0.55
SNRPA1-201ENST00000254193 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
SNRPA1-201ENST00000254193 TIMM21Q9BVV7 248 aa11.64□□□□□ -0.55
SNRPA1-201ENST00000254193 LAMTOR2Q9Y2Q5 125 aa11.64□□□□□ -0.55
SNRPA1-201ENST00000254193 TRAV9-1A0A075B6T8 112 aa11.63□□□□□ -0.55
SNRPA1-201ENST00000254193 RAB5AP20339 215 aa11.63□□□□□ -0.55
SNRPA1-201ENST00000254193 SS18Q15532 418 aa11.63□□□□□ -0.55
SNRPA1-201ENST00000254193 Q6ZUT4 128 aa11.63□□□□□ -0.55
SNRPA1-201ENST00000254193 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
SNRPA1-201ENST00000254193 SLPIP03973 132 aa11.62□□□□□ -0.55
SNRPA1-201ENST00000254193 S100PP25815 95 aa11.62□□□□□ -0.55
SNRPA1-201ENST00000254193 CFAP161Q6P656 301 aa11.62□□□□□ -0.55
SNRPA1-201ENST00000254193 C9orf163Q8N9P6 203 aa11.62□□□□□ -0.55
SNRPA1-201ENST00000254193 RPS10P5Q9NQ39 176 aa11.62□□□□□ -0.55
SNRPA1-201ENST00000254193 PRSS47A8MTI9 375 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 EPM2AB3EWF7 344 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 RHEBQ15382 184 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 KIAA1644Q3SXP7 199 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 HIGD2BQ4VC39 106 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 OPRPNQ99935 248 aaPredicted RBP11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 AP5S1Q9NUS5 200 aa11.61□□□□□ -0.55
SNRPA1-201ENST00000254193 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
SNRPA1-201ENST00000254193 CNBPP62633 177 aaKnown RBP11.6□□□□□ -0.55
SNRPA1-201ENST00000254193 CD164L2Q6UWJ8 174 aa11.6□□□□□ -0.55
SNRPA1-201ENST00000254193 FAM104AQ969W3 186 aa11.6□□□□□ -0.55
SNRPA1-201ENST00000254193 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
SNRPA1-201ENST00000254193 SCXQ7RTU7 201 aa11.59□□□□□ -0.55
SNRPA1-201ENST00000254193 Q8N8P6 123 aa11.59□□□□□ -0.55
SNRPA1-201ENST00000254193 C1orf196B1AJZ1 125 aa11.58□□□□□ -0.56
SNRPA1-201ENST00000254193 APOC3P02656 99 aa11.58□□□□□ -0.56
SNRPA1-201ENST00000254193 Q5VSD8 79 aa11.58□□□□□ -0.56
SNRPA1-201ENST00000254193 CHAC1Q9BUX1 264 aa11.58□□□□□ -0.56
SNRPA1-201ENST00000254193 PCLOQ9Y6V0 5065 aa11.57□□□□□ -0.56
SNRPA1-201ENST00000254193 ABCA13Q86UQ4 5058 aa11.57□□□□□ -0.56
SNRPA1-201ENST00000254193 SDIM1Q6ZPB5 146 aa11.57□□□□□ -0.56
SNRPA1-201ENST00000254193 GNB1LQ9BYB4 327 aa11.57□□□□□ -0.56
SNRPA1-201ENST00000254193 GVQW2A0A096LPI5 108 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-201ENST00000254193 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.56□□□□□ -0.56
SNRPA1-201ENST00000254193 MRPS36P82909 103 aaKnown RBP11.56□□□□□ -0.56
SNRPA1-201ENST00000254193 IGHV1-58A0A0C4DH39 117 aa11.55□□□□□ -0.56
SNRPA1-201ENST00000254193 IFI27P40305 119 aaPredicted RBP11.55□□□□□ -0.56
SNRPA1-201ENST00000254193 CIRBP-AS1Q8TBR5 109 aa11.55□□□□□ -0.56
SNRPA1-201ENST00000254193 LINC00526Q96FQ7 95 aa11.55□□□□□ -0.56
SNRPA1-201ENST00000254193 FAM229AH3BQW9 127 aa11.54□□□□□ -0.56
SNRPA1-201ENST00000254193 NDUFA5Q16718 116 aa11.54□□□□□ -0.56
SNRPA1-201ENST00000254193 NXT2Q9NPJ8 142 aaKnown RBP11.54□□□□□ -0.56
SNRPA1-201ENST00000254193 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.54□□□□□ -0.56
SNRPA1-201ENST00000254193 FAT1Q14517 4588 aa11.54□□□□□ -0.56
SNRPA1-201ENST00000254193 IGHV3-64A0A075B6Q5 118 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 IFITM10A6NMD0 228 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 PANO1I0J062 215 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 COX7A2LO14548 114 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 ORMDL2Q53FV1 153 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 C5orf38Q86SI9 138 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 SVBPQ8N300 66 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 PYGO1Q9Y3Y4 419 aa11.53□□□□□ -0.56
SNRPA1-201ENST00000254193 DNAH8Q96JB1 4490 aa11.52□□□□□ -0.56
SNRPA1-201ENST00000254193 IGLV4-3A0A075B6K6 122 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 TGIF2-C20orf24A0A0A6YYL0 155 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 SNAPINO95295 136 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 MALP21145 153 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 COX19Q49B96 90 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 C2orf66Q6UXQ4 117 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 CYSLTR1Q9Y271 337 aa11.52□□□□□ -0.57
SNRPA1-201ENST00000254193 FABP9Q0Z7S8 132 aa11.51□□□□□ -0.57
SNRPA1-201ENST00000254193 LINC00528Q8N1L1 170 aa11.51□□□□□ -0.57
SNRPA1-201ENST00000254193 ALKBH7Q9BT30 221 aaPredicted RBP11.51□□□□□ -0.57
SNRPA1-201ENST00000254193 MRPL18Q9H0U6 180 aaKnown RBP11.51□□□□□ -0.57
SNRPA1-201ENST00000254193 K7EMI3 77 aa11.5□□□□□ -0.57
SNRPA1-201ENST00000254193 MT-ND6P03923 174 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms