RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 C16orf95Q9H693 158 aa10.63□□□□□ -0.71
ZC3H4-201ENST00000253048 LINC00574Q9H8X3 128 aa10.63□□□□□ -0.71
ZC3H4-201ENST00000253048 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.63□□□□□ -0.711e-6■■□□□ 13.5
ZC3H4-201ENST00000253048 C19orf71A6NCJ1 209 aa10.62□□□□□ -0.71
ZC3H4-201ENST00000253048 IGLV2-11P01706 119 aa10.62□□□□□ -0.71
ZC3H4-201ENST00000253048 LTBP2Q14767 1821 aa10.62□□□□□ -0.71
ZC3H4-201ENST00000253048 OTOGLQ3ZCN5 2332 aa10.62□□□□□ -0.71
ZC3H4-201ENST00000253048 GDF5OSQ5U4N7 250 aa10.61□□□□□ -0.71
ZC3H4-201ENST00000253048 PLA2G1BP04054 148 aaKnown RBP10.6□□□□□ -0.71
ZC3H4-201ENST00000253048 CDSNQ15517 529 aa10.6□□□□□ -0.71
ZC3H4-201ENST00000253048 RBX1P62877 108 aa10.6□□□□□ -0.71
ZC3H4-201ENST00000253048 MRGPRG-AS1Q2M3A8 158 aa10.6□□□□□ -0.71
ZC3H4-201ENST00000253048 ZNF106Q9H2Y7 1883 aaKnown RBP10.6□□□□□ -0.71
ZC3H4-201ENST00000253048 CLEC2BQ92478 149 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 RPL37AP8A6NKH3 93 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 NDUFC2-KCTD14E9PQ53 114 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 CDPF1Q6NVV7 123 aa10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 NCOA6Q14686 2063 aaPredicted RBP10.59□□□□□ -0.71
ZC3H4-201ENST00000253048 ALPK3Q96L96 1907 aa10.58□□□□□ -0.72
ZC3H4-201ENST00000253048 NOTCH3Q9UM47 2321 aa10.58□□□□□ -0.72
ZC3H4-201ENST00000253048 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
ZC3H4-201ENST00000253048 FREM1Q5H8C1 2179 aa10.58□□□□□ -0.72
ZC3H4-201ENST00000253048 LINC00337Q8N6G1 96 aa10.58□□□□□ -0.72
ZC3H4-201ENST00000253048 M0R378 163 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 CIRBP-AS1Q8TBR5 109 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 A0A0U1RQV1 116 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 E9PLD3 99 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 IGLV1-40P01703 118 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 Q6ZS46 218 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 DYSFO75923 2080 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 AVPP01185 164 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 IGLV2-14P01704 120 aa10.57□□□□□ -0.72
ZC3H4-201ENST00000253048 LOC100131303A0A0U1RQF7 123 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 C1orf158Q8N1D5 194 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 IBA57-AS1B1ANH7 110 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 LINC00526Q96FQ7 95 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 OBSL1O75147 1896 aa10.56□□□□□ -0.72
ZC3H4-201ENST00000253048 M0QXV9 152 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 WFDC13Q8IUB5 93 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 G3V4G9 280 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 H3BT86 120 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 C1orf137Q5JT78 98 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 Q6ZTC4 211 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 MED13Q9UHV7 2174 aa10.55□□□□□ -0.72
ZC3H4-201ENST00000253048 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
ZC3H4-201ENST00000253048 PCNX3Q9H6A9 2034 aa10.54□□□□□ -0.72
ZC3H4-201ENST00000253048 PCDH15Q96QU1 1955 aa10.54□□□□□ -0.72
ZC3H4-201ENST00000253048 FAM229AH3BQW9 127 aa10.54□□□□□ -0.72
ZC3H4-201ENST00000253048 PROK1P58294 105 aa10.54□□□□□ -0.72
ZC3H4-201ENST00000253048 ZNF295-AS1Q8N0V1 137 aa10.53□□□□□ -0.72
ZC3H4-201ENST00000253048 KIAA1549LQ6ZVL6 1849 aa10.53□□□□□ -0.72
ZC3H4-201ENST00000253048 LINC01556Q5JQF7 62 aa10.52□□□□□ -0.72
ZC3H4-201ENST00000253048 C10orf25Q5T742 122 aa10.52□□□□□ -0.73
ZC3H4-201ENST00000253048 BDP1A6H8Y1 2624 aa10.52□□□□□ -0.73
ZC3H4-201ENST00000253048 WDR87Q6ZQQ6 2873 aa10.52□□□□□ -0.73
ZC3H4-201ENST00000253048 IGLV1-51P01701 117 aa10.52□□□□□ -0.73
ZC3H4-201ENST00000253048 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
ZC3H4-201ENST00000253048 J3QL48 77 aa10.51□□□□□ -0.73
ZC3H4-201ENST00000253048 Q8N6K4 173 aa10.51□□□□□ -0.73
ZC3H4-201ENST00000253048 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
ZC3H4-201ENST00000253048 CCKP06307 115 aa10.5□□□□□ -0.73
ZC3H4-201ENST00000253048 CDKN2A-AS1Q9UH64 79 aa10.5□□□□□ -0.73
ZC3H4-201ENST00000253048 NACAE9PAV3 2078 aa10.5□□□□□ -0.73
ZC3H4-201ENST00000253048 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
ZC3H4-201ENST00000253048 ARHGAP21Q5T5U3 1957 aa10.49□□□□□ -0.73
ZC3H4-201ENST00000253048 C3orf84H3BNL1 204 aa10.49□□□□□ -0.73
ZC3H4-201ENST00000253048 DSCAMO60469 2012 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 M0QY20 66 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 CENPFP49454 3210 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 A0A0J9YXY3 114 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 ATP5EP2Q5VTU8 51 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 UTRNP46939 3433 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 PLCE1Q9P212 2302 aa10.48□□□□□ -0.73
ZC3H4-201ENST00000253048 LINC00173Q6ZV60 143 aa10.47□□□□□ -0.73
ZC3H4-201ENST00000253048 ATP5EP56381 51 aaPredicted RBP10.47□□□□□ -0.73
ZC3H4-201ENST00000253048 IGLV4-3A0A075B6K6 122 aa10.47□□□□□ -0.73
ZC3H4-201ENST00000253048 MDFIQ99750 246 aa10.46□□□□□ -0.73
ZC3H4-201ENST00000253048 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
ZC3H4-201ENST00000253048 TNRC6AQ8NDV7 1962 aaKnown RBP10.46□□□□□ -0.74
ZC3H4-201ENST00000253048 PRR14LQ5THK1 2151 aa10.46□□□□□ -0.74
ZC3H4-201ENST00000253048 C1orf229Q6ZS94 237 aaPredicted RBP10.46□□□□□ -0.74
ZC3H4-201ENST00000253048 C6orf223Q8N319 242 aa10.46□□□□□ -0.74
ZC3H4-201ENST00000253048 SLPIP03973 132 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 REG3GQ6UW15 175 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 FAM19A3Q7Z5A8 133 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 FHL3Q13643 280 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 C6orf99Q4VX62 202 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 Q6ZPA2 131 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 SDIM1Q6ZPB5 146 aa10.45□□□□□ -0.74
ZC3H4-201ENST00000253048 CRIP3Q6Q6R5 217 aa10.44□□□□□ -0.74
ZC3H4-201ENST00000253048 XGP55808 180 aa10.44□□□□□ -0.74
ZC3H4-201ENST00000253048 NUPR1O60356 82 aa10.44□□□□□ -0.74
ZC3H4-201ENST00000253048 NOTCH2Q04721 2471 aa10.44□□□□□ -0.74
ZC3H4-201ENST00000253048 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms