RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 C9orf163Q8N9P6 203 aa14.83□□□□□ -0.04
LSM4-201ENST00000252816 CHAC1Q9BUX1 264 aa14.83□□□□□ -0.04
LSM4-201ENST00000252816 D6R8Y8 96 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 TNFRSF6BO95407 300 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 SLPIP03973 132 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 ATP5L2Q7Z4Y8 100 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 C15orf56Q8N910 161 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 KIR2DL4Q99706 377 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 C20orf78Q9BR46 151 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 CDC42SE2Q9NRR3 84 aa14.82□□□□□ -0.04
LSM4-201ENST00000252816 MT-ND4LP03901 98 aa14.81□□□□□ -0.04
LSM4-201ENST00000252816 CNBPP62633 177 aaKnown RBP14.81□□□□□ -0.04
LSM4-201ENST00000252816 ANAPC16Q96DE5 110 aa14.81□□□□□ -0.04
LSM4-201ENST00000252816 LINC00959A0A1B0GUT2 108 aa14.8□□□□□ -0.04
LSM4-201ENST00000252816 NPYP01303 97 aa14.8□□□□□ -0.04
LSM4-201ENST00000252816 INAFM2P0DMQ5 153 aa14.8□□□□□ -0.04
LSM4-201ENST00000252816 RPL32P62910 135 aaKnown RBP14.8□□□□□ -0.04
LSM4-201ENST00000252816 CIRBP-AS1Q8TBR5 109 aa14.8□□□□□ -0.04
LSM4-201ENST00000252816 FOXI1Q12951 378 aa14.79□□□□□ -0.04
LSM4-201ENST00000252816 ZNF664Q8N3J9 261 aa14.79□□□□□ -0.04
LSM4-201ENST00000252816 ADCYAP1P18509 176 aa14.78□□□□□ -0.04
LSM4-201ENST00000252816 LINC00528Q8N1L1 170 aa14.78□□□□□ -0.04
LSM4-201ENST00000252816 UBE2D4Q9Y2X8 147 aa14.78□□□□□ -0.04
LSM4-201ENST00000252816 XCL1P47992 114 aa14.77□□□□□ -0.05
LSM4-201ENST00000252816 CFAP161Q6P656 301 aa14.77□□□□□ -0.05
LSM4-201ENST00000252816 SDIM1Q6ZPB5 146 aa14.77□□□□□ -0.05
LSM4-201ENST00000252816 SMIM2Q9BVW6 85 aa14.77□□□□□ -0.05
LSM4-201ENST00000252816 AP5S1Q9NUS5 200 aa14.77□□□□□ -0.05
LSM4-201ENST00000252816 CCL25O15444 150 aa14.76□□□□□ -0.05
LSM4-201ENST00000252816 PPBPP02775 128 aa14.76□□□□□ -0.05
LSM4-201ENST00000252816 UQCC3Q6UW78 93 aa14.76□□□□□ -0.05
LSM4-201ENST00000252816 CSDC2Q9Y534 153 aaKnown RBP14.76□□□□□ -0.05
LSM4-201ENST00000252816 PHOX2AO14813 284 aa14.75□□□□□ -0.05
LSM4-201ENST00000252816 HIGD2BQ4VC39 106 aa14.75□□□□□ -0.05
LSM4-201ENST00000252816 ORMDL3Q8N138 153 aa14.75□□□□□ -0.05
LSM4-201ENST00000252816 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.75□□□□□ -0.05
LSM4-201ENST00000252816 TMEM218A2RU14 115 aa14.74□□□□□ -0.05
LSM4-201ENST00000252816 PANO1I0J062 215 aa14.74□□□□□ -0.05
LSM4-201ENST00000252816 RNASE13Q5GAN3 156 aaKnown RBP14.74□□□□□ -0.05
LSM4-201ENST00000252816 TMEM136Q6ZRR5 245 aa14.74□□□□□ -0.05
LSM4-201ENST00000252816 RPL39P62891 51 aaKnown RBP14.73□□□□□ -0.05
LSM4-201ENST00000252816 SS18Q15532 418 aa14.73□□□□□ -0.05
LSM4-201ENST00000252816 FLG2Q5D862 2391 aaPredicted RBP14.73□□□□□ -0.05
LSM4-201ENST00000252816 TCAPO15273 167 aa14.72□□□□□ -0.05
LSM4-201ENST00000252816 SMAGPQ0VAQ4 97 aa14.72□□□□□ -0.05
LSM4-201ENST00000252816 Q6ZUT4 128 aa14.72□□□□□ -0.05
LSM4-201ENST00000252816 PRELID3AQ96N28 172 aa14.72□□□□□ -0.05
LSM4-201ENST00000252816 TIMM21Q9BVV7 248 aa14.72□□□□□ -0.05
LSM4-201ENST00000252816 GVQW2A0A096LPI5 108 aaPredicted RBP14.71□□□□□ -0.05
LSM4-201ENST00000252816 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.71□□□□□ -0.05
LSM4-201ENST00000252816 TMEM18Q96B42 140 aa14.71□□□□□ -0.05
LSM4-201ENST00000252816 MYCBP2O75592 4640 aa14.7□□□□□ -0.06
LSM4-201ENST00000252816 IGHV3-64A0A075B6Q5 118 aa14.7□□□□□ -0.06
LSM4-201ENST00000252816 CD164L2Q6UWJ8 174 aa14.7□□□□□ -0.06
LSM4-201ENST00000252816 FAM104AQ969W3 186 aa14.7□□□□□ -0.06
LSM4-201ENST00000252816 PLA2G1BP04054 148 aaKnown RBP14.69□□□□□ -0.06
LSM4-201ENST00000252816 COMMD7Q86VX2 200 aa14.68□□□□□ -0.06
LSM4-201ENST00000252816 TRAV13-1A0A0B4J241 112 aa14.67□□□□□ -0.06
LSM4-201ENST00000252816 IGHV1-58A0A0C4DH39 117 aa14.67□□□□□ -0.06
LSM4-201ENST00000252816 C1orf196B1AJZ1 125 aa14.67□□□□□ -0.06
LSM4-201ENST00000252816 IMMP2LQ96T52 175 aa14.67□□□□□ -0.06
LSM4-201ENST00000252816 PRSS47A8MTI9 375 aa14.66□□□□□ -0.06
LSM4-201ENST00000252816 CHTF8P0CG12 524 aa14.66□□□□□ -0.06
LSM4-201ENST00000252816 CIRBPQ14011 172 aaKnown RBP14.66□□□□□ -0.06
LSM4-201ENST00000252816 LINC00526Q96FQ7 95 aa14.66□□□□□ -0.06
LSM4-201ENST00000252816 OPRPNQ99935 248 aaPredicted RBP14.66□□□□□ -0.06
LSM4-201ENST00000252816 SEC11CQ9BY50 192 aa14.66□□□□□ -0.06
LSM4-201ENST00000252816 LOC389332A0A1B0GUA5 103 aa14.65□□□□□ -0.06
LSM4-201ENST00000252816 KRTAP10-4P60372 401 aaPredicted RBP14.65□□□□□ -0.06
LSM4-201ENST00000252816 CTDSP1Q9GZU7 261 aa14.65□□□□□ -0.06
LSM4-201ENST00000252816 SPANXA1Q9NS26 97 aa14.65□□□□□ -0.06
LSM4-201ENST00000252816 LAMTOR2Q9Y2Q5 125 aa14.65□□□□□ -0.06
LSM4-201ENST00000252816 RAB5AP20339 215 aa14.63□□□□□ -0.07
LSM4-201ENST00000252816 MAP1LC3AQ9H492 121 aa14.63□□□□□ -0.07
LSM4-201ENST00000252816 MRPS36P82909 103 aaKnown RBP14.62□□□□□ -0.07
LSM4-201ENST00000252816 COX6A2Q02221 97 aa14.62□□□□□ -0.07
LSM4-201ENST00000252816 PRSS3P2Q8NHM4 247 aa14.62□□□□□ -0.07
LSM4-201ENST00000252816 COX7A2LO14548 114 aa14.61□□□□□ -0.07
LSM4-201ENST00000252816 SPACA4Q8TDM5 124 aa14.61□□□□□ -0.07
LSM4-201ENST00000252816 Q8N8P6 123 aa14.6□□□□□ -0.07
LSM4-201ENST00000252816 MALP21145 153 aa14.59□□□□□ -0.07
LSM4-201ENST00000252816 C10orf91Q5T1B1 145 aa14.59□□□□□ -0.07
LSM4-201ENST00000252816 C5orf38Q86SI9 138 aa14.59□□□□□ -0.07
LSM4-201ENST00000252816 DMBT1Q9UGM3 2413 aaPredicted RBP14.58□□□□□ -0.07
LSM4-201ENST00000252816 TRAV9-1A0A075B6T8 112 aa14.58□□□□□ -0.08
LSM4-201ENST00000252816 A0A087WYN8 130 aa14.58□□□□□ -0.08
LSM4-201ENST00000252816 ZNF561-AS1K7EIQ3 104 aa14.58□□□□□ -0.08
LSM4-201ENST00000252816 DPH3Q96FX2 82 aa14.58□□□□□ -0.08
LSM4-201ENST00000252816 CARD19Q96LW7 228 aa14.57□□□□□ -0.08
LSM4-201ENST00000252816 PYGO1Q9Y3Y4 419 aa14.57□□□□□ -0.08
LSM4-201ENST00000252816 IGLV4-69A0A075B6H9 119 aa14.56□□□□□ -0.08
LSM4-201ENST00000252816 IGLV4-3A0A075B6K6 122 aa14.56□□□□□ -0.08
LSM4-201ENST00000252816 IFI27P40305 119 aaPredicted RBP14.56□□□□□ -0.08
LSM4-201ENST00000252816 KIAA1644Q3SXP7 199 aa14.56□□□□□ -0.08
LSM4-201ENST00000252816 IGKV2-24A0A0C4DH68 120 aa14.55□□□□□ -0.08
LSM4-201ENST00000252816 IFITM10A6NMD0 228 aa14.55□□□□□ -0.08
LSM4-201ENST00000252816 RPL37AP61513 92 aaKnown RBP14.55□□□□□ -0.08
LSM4-201ENST00000252816 SYCNQ0VAF6 134 aa14.55□□□□□ -0.08
LSM4-201ENST00000252816 CARHSP1Q9Y2V2 147 aaKnown RBP14.55□□□□□ -0.08
LSM4-201ENST00000252816 IGHV3OR16-9A0A0B4J2B5 98 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms