RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 WTAPQ15007 396 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 CLIC4Q9Y696 253 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 PRDX5P30044 214 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 IARSP41252 1262 aaKnown RBP20.81■□□□□ 0.92
PHGDH-226ENST00000641756 KIF23Q02241 960 aaPredicted RBP20.81■□□□□ 0.92
PHGDH-226ENST00000641756 TYRO3Q06418 890 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 ANKIB1Q9P2G1 1089 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 BAZ2AQ9UIF9 1905 aaKnown RBP20.81■□□□□ 0.92
PHGDH-226ENST00000641756 MRVI1Q9Y6F6 885 aa20.81■□□□□ 0.92
PHGDH-226ENST00000641756 ECM29Q5VYK3 1845 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 GRAPQ13588 217 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 SART3Q15020 963 aaKnown RBP20.8■□□□□ 0.92
PHGDH-226ENST00000641756 MYSM1Q5VVJ2 828 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 SYNE3Q6ZMZ3 975 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 ZSCAN30Q86W11 494 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 GRAPLQ8TC17 118 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-226ENST00000641756 RTEL1Q9NZ71 1219 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 ERICH2A1L162 156 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 PRR5LQ6MZQ0 368 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 SLC26A6Q9BXS9 759 aa20.8■□□□□ 0.92
PHGDH-226ENST00000641756 AATFQ9NY61 560 aaKnown RBP eCLIP20.8■□□□□ 0.92
PHGDH-226ENST00000641756 IRS2Q9Y4H2 1338 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 HS1BP3Q53T59 392 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 KRT40Q6A162 431 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 RBM43Q6ZSC3 357 aaKnown RBP20.79■□□□□ 0.92
PHGDH-226ENST00000641756 BRAPQ7Z569 592 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 ANAPC4Q9UJX5 808 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 PCDHA7Q9UN72 937 aa20.79■□□□□ 0.92
PHGDH-226ENST00000641756 STK38Q15208 465 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 BRIP1Q9BX63 1249 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 EP400Q96L91 3159 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 UBR3Q6ZT12 1888 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 PDS5AQ29RF7 1337 aaKnown RBP20.78■□□□□ 0.92
PHGDH-226ENST00000641756 ADRA2BP18089 450 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 PLCB2Q00722 1185 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 LINC00301Q8NCQ3 95 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 UBAC1Q9BSL1 405 aa20.78■□□□□ 0.92
PHGDH-226ENST00000641756 PRDM1O75626 825 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 ADCY5O95622 1261 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 GYS1P13807 737 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 EVX2Q03828 476 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 SSRP1Q08945 709 aaKnown RBP20.77■□□□□ 0.92
PHGDH-226ENST00000641756 CCDC73Q6ZRK6 1079 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 FSIP1Q8NA03 581 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 NUP133Q8WUM0 1156 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 ESR2Q92731 530 aa20.77■□□□□ 0.92
PHGDH-226ENST00000641756 GPR101Q96P66 508 aaPredicted RBP20.77■□□□□ 0.92
PHGDH-226ENST00000641756 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.77■□□□□ 0.91
PHGDH-226ENST00000641756 TRIM37O94972 964 aa20.77■□□□□ 0.91
PHGDH-226ENST00000641756 SNW1Q13573 536 aaKnown RBP20.77■□□□□ 0.91
PHGDH-226ENST00000641756 SF3A1Q15459 793 aaKnown RBP20.77■□□□□ 0.91
PHGDH-226ENST00000641756 RTN1Q16799 776 aa20.77■□□□□ 0.91
PHGDH-226ENST00000641756 ANO6Q4KMQ2 910 aa20.77■□□□□ 0.91
PHGDH-226ENST00000641756 CTR9Q6PD62 1173 aa20.77■□□□□ 0.91
PHGDH-226ENST00000641756 CMTR1Q8N1G2 835 aaKnown RBP20.77■□□□□ 0.91
PHGDH-226ENST00000641756 TNKSO95271 1327 aa20.76■□□□□ 0.91
PHGDH-226ENST00000641756 MSNP26038 577 aaKnown RBP20.76■□□□□ 0.91
PHGDH-226ENST00000641756 CCDC82Q8N4S0 544 aa20.76■□□□□ 0.91
PHGDH-226ENST00000641756 POLR3EQ9NVU0 708 aa20.76■□□□□ 0.91
PHGDH-226ENST00000641756 CCDC39Q9UFE4 941 aa20.76■□□□□ 0.91
PHGDH-226ENST00000641756 DUOX1Q9NRD9 1551 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 USP17L12C9JPN9 530 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 USP17L21D6R901 530 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 FMNL1O95466 1100 aaPredicted RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 PTMAP06454 111 aaKnown RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 GUCY1A2P33402 732 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 SASS6Q6UVJ0 657 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 ZNF654Q8IZM8 581 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 FAM200AQ8TCP9 573 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 RPGRQ92834 1020 aaKnown RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 MYH2Q9UKX2 1941 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 AP5Z1O43299 807 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 IFNAR1P17181 557 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 GNL2Q13823 731 aaKnown RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 MPNDQ8N594 471 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 ENGASEQ8NFI3 743 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 NOL7Q9UMY1 257 aaKnown RBP20.75■□□□□ 0.91
PHGDH-226ENST00000641756 NID2Q14112 1375 aa20.75■□□□□ 0.91
PHGDH-226ENST00000641756 STK36Q9NRP7 1315 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 SPTLC2O15270 562 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 YEATS4O95619 227 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 SERPINB2P05120 415 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 FAM160A1Q05DH4 1040 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 TRIM29Q14134 588 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 SEC23AQ15436 765 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 ANO1Q5XXA6 986 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
PHGDH-226ENST00000641756 TMTC2Q8N394 836 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 MTA3Q9BTC8 594 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 CRNKL1Q9BZJ0 848 aaKnown RBP20.74■□□□□ 0.91
PHGDH-226ENST00000641756 LEMD3Q9Y2U8 911 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 ADALQ6DHV7 355 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 KRT27Q7Z3Y8 459 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 LUZP1Q86V48 1076 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 KCNG4Q8TDN1 519 aa20.74■□□□□ 0.91
PHGDH-226ENST00000641756 MRPS27Q92552 414 aaKnown RBP20.74■□□□□ 0.91
PHGDH-226ENST00000641756 DCP1AQ9NPI6 582 aaPredicted RBP20.74■□□□□ 0.91
PHGDH-226ENST00000641756 XDHP47989 1333 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms