RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 ZKSCAN2Q63HK3 967 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 NBPF11Q86T75 865 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 SPATA5Q8NB90 893 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 ZNF384Q8TF68 577 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 MROH7-TTC4A0A0A0MT08 1334 aa22.8■■□□□ 1.24
CLN6-220ENST00000637450 DDTLA6NHG4 134 aaPredicted RBP22.79■■□□□ 1.24
CLN6-220ENST00000637450 GNRH1P01148 92 aa22.79■■□□□ 1.24
CLN6-220ENST00000637450 ARID4AP29374 1257 aaPredicted RBP22.79■■□□□ 1.24
CLN6-220ENST00000637450 GORABQ5T7V8 394 aa22.79■■□□□ 1.24
CLN6-220ENST00000637450 ZSCAN29Q8IWY8 852 aaPredicted RBP22.79■■□□□ 1.24
CLN6-220ENST00000637450 TMEM57Q8N5G2 664 aa22.79■■□□□ 1.24
CLN6-220ENST00000637450 RHBDL3P58872 404 aa22.78■■□□□ 1.24
CLN6-220ENST00000637450 SLC9C1Q4G0N8 1177 aa22.78■■□□□ 1.24
CLN6-220ENST00000637450 PI16Q6UXB8 463 aa22.78■■□□□ 1.24
CLN6-220ENST00000637450 SCYL3Q8IZE3 742 aa22.78■■□□□ 1.24
CLN6-220ENST00000637450 NSUN4Q96CB9 384 aaKnown RBP22.78■■□□□ 1.24
CLN6-220ENST00000637450 CPA4Q9UI42 421 aa22.78■■□□□ 1.24
CLN6-220ENST00000637450 KIAA0100Q14667 2235 aaKnown RBP22.78■■□□□ 1.24
CLN6-220ENST00000637450 PTPRAP18433 802 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 EN2P19622 333 aaPredicted RBP22.77■■□□□ 1.24
CLN6-220ENST00000637450 PICALMQ13492 652 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 GPAT2Q6NUI2 795 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 TBC1D9Q6ZT07 1266 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 TMEM106CQ9BVX2 250 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 ZHX2Q9Y6X8 837 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 ADGRA2Q96PE1 1338 aa22.77■■□□□ 1.24
CLN6-220ENST00000637450 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
CLN6-220ENST00000637450 LDHCP07864 332 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 SLURP2P0DP57 97 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 PRMT2P55345 433 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 GSTO1P78417 241 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 POLA2Q14181 598 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 PICK1Q9NRD5 415 aa22.76■■□□□ 1.23
CLN6-220ENST00000637450 AK9Q5TCS8 1911 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 MYH2Q9UKX2 1941 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 CTNND1O60716 968 aaKnown RBP22.75■■□□□ 1.23
CLN6-220ENST00000637450 MAP4K4O95819 1239 aaPredicted RBP22.75■■□□□ 1.23
CLN6-220ENST00000637450 CTGFP29279 349 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 MCAMP43121 646 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 ATP8B2P98198 1209 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 AFG3L2Q9Y4W6 797 aa22.75■■□□□ 1.23
CLN6-220ENST00000637450 A0A0G2JLL6 359 aaPredicted RBP22.74■■□□□ 1.23
CLN6-220ENST00000637450 TBC1D12O60347 775 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 UQCRFS1P1P0C7P4 283 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 PSMC4P43686 418 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 FASTKD5Q7L8L6 764 aaKnown RBP22.74■■□□□ 1.23
CLN6-220ENST00000637450 PRRT2Q7Z6L0 340 aaPredicted RBP22.74■■□□□ 1.23
CLN6-220ENST00000637450 SSH3Q8TE77 659 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 GPR108Q9NPR9 543 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 RAI14Q9P0K7 980 aa22.74■■□□□ 1.23
CLN6-220ENST00000637450 HNRNPUQ00839 825 aaKnown RBP eCLIP22.73■■□□□ 1.23
CLN6-220ENST00000637450 TRIM47Q96LD4 638 aa22.73■■□□□ 1.23
CLN6-220ENST00000637450 PARK7Q99497 189 aaKnown RBP22.73■■□□□ 1.23
CLN6-220ENST00000637450 CYP2C8P10632 490 aa22.72■■□□□ 1.23
CLN6-220ENST00000637450 MIER1Q8N108 512 aa22.72■■□□□ 1.23
CLN6-220ENST00000637450 SH3TC2Q8TF17 1288 aa22.72■■□□□ 1.23
CLN6-220ENST00000637450 LRP2BPQ9P2M1 347 aa22.72■■□□□ 1.23
CLN6-220ENST00000637450 SRRDQ9UH36 339 aa22.72■■□□□ 1.23
CLN6-220ENST00000637450 ECM2O94769 699 aaPredicted RBP22.71■■□□□ 1.23
CLN6-220ENST00000637450 BCRP11274 1271 aa22.71■■□□□ 1.23
CLN6-220ENST00000637450 HOXD10P28358 340 aa22.71■■□□□ 1.23
CLN6-220ENST00000637450 SLC4A8Q2Y0W8 1093 aa22.71■■□□□ 1.23
CLN6-220ENST00000637450 TNNI3KQ59H18 835 aa22.71■■□□□ 1.23
CLN6-220ENST00000637450 FPGT-TNNI3KV9GXZ4 949 aa22.71■■□□□ 1.23
CLN6-220ENST00000637450 FMNL1O95466 1100 aaPredicted RBP22.7■■□□□ 1.22
CLN6-220ENST00000637450 OSBPP22059 807 aa22.7■■□□□ 1.22
CLN6-220ENST00000637450 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.7■■□□□ 1.22
CLN6-220ENST00000637450 SLC45A1Q9Y2W3 748 aa22.7■■□□□ 1.22
CLN6-220ENST00000637450 ZBTB7BO15156 539 aaPredicted RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 SURF6O75683 361 aaKnown RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 MYCP01106 439 aaPredicted RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 OS9Q13438 667 aaPredicted RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 CCDC158Q5M9N0 1113 aa22.69■■□□□ 1.22
CLN6-220ENST00000637450 GADL1Q6ZQY3 521 aa22.69■■□□□ 1.22
CLN6-220ENST00000637450 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 DBNDD2Q9BQY9 259 aa22.69■■□□□ 1.22
CLN6-220ENST00000637450 OSBPL5Q9H0X9 879 aaPredicted RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 C1orf115Q9H7X2 142 aa22.69■■□□□ 1.22
CLN6-220ENST00000637450 SNRKQ9NRH2 765 aa22.69■■□□□ 1.22
CLN6-220ENST00000637450 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
CLN6-220ENST00000637450 TTC39AQ5SRH9 613 aa22.68■■□□□ 1.22
CLN6-220ENST00000637450 TEX11Q8IYF3 940 aa22.68■■□□□ 1.22
CLN6-220ENST00000637450 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.68■■□□□ 1.22
CLN6-220ENST00000637450 TRIM75PA6NK02 468 aa22.67■■□□□ 1.22
CLN6-220ENST00000637450 FAM196BA6NMK8 535 aa22.67■■□□□ 1.22
CLN6-220ENST00000637450 RLBP1P12271 317 aa22.67■■□□□ 1.22
CLN6-220ENST00000637450 CCDC84Q86UT8 332 aaPredicted RBP22.67■■□□□ 1.22
CLN6-220ENST00000637450 ITPRIPQ8IWB1 547 aa22.67■■□□□ 1.22
CLN6-220ENST00000637450 SH3RF3Q8TEJ3 882 aaPredicted RBP22.67■■□□□ 1.22
CLN6-220ENST00000637450 ZNF512BQ96KM6 892 aaPredicted RBP22.67■■□□□ 1.22
CLN6-220ENST00000637450 RBBP6Q7Z6E9 1792 aaKnown RBP22.67■■□□□ 1.22
CLN6-220ENST00000637450 COL2A1P02458 1487 aaPredicted RBP22.66■■□□□ 1.22
CLN6-220ENST00000637450 ZSWIM8A7E2V4 1837 aa22.66■■□□□ 1.22
CLN6-220ENST00000637450 DOCK2Q92608 1830 aa22.66■■□□□ 1.22
CLN6-220ENST00000637450 CYP2E1P05181 493 aaPredicted RBP22.66■■□□□ 1.22
CLN6-220ENST00000637450 FCGRTP55899 365 aa22.66■■□□□ 1.22
CLN6-220ENST00000637450 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
CLN6-220ENST00000637450 RAET1EQ8TD07 263 aa22.66■■□□□ 1.22
CLN6-220ENST00000637450 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
CLN6-220ENST00000637450 BAG3O95817 575 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms