RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	MS4A4A	Q96JQ5	239 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	MEIS3	Q99687	375 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	ZNF341	Q9BYN7	854 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	DENND2A	Q9ULE3	1009 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	DAGLA	Q9Y4D2	1042 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	SNCAIP	Q9Y6H5	919 aa		12.86	□□□□□ -0.35
UBE3A-223	ENST00000631247	DOCK2	Q92608	1830 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	GNAI3	P08754	354 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	PRDX5	P30044	214 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	RARS	P54136	660 aa	Known RBP	12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	TCP10	Q12799	353 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	SNAPC2	Q13487	334 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	DIXDC1	Q155Q3	683 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	INTS3	Q68E01	1043 aa	Known RBP	12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	DZIP1	Q86YF9	867 aa	Known RBP	12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	FAM151A	Q8WW52	585 aa		12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	PA2G4	Q9UQ80	394 aa	Known RBP	12.85	□□□□□ -0.35
UBE3A-223	ENST00000631247	IPO8	O15397	1037 aa	Known RBP	12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	SRGAP3	O43295	1099 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PHKA1	P46020	1223 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PPIL2	Q13356	520 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	MIGA2	Q7L4E1	593 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PDCD7	Q8N8D1	485 aa	Known RBP	12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PLSCR2	Q9NRY7	297 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	USP40	Q9NVE5	1235 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PCDH10	Q9P2E7	1040 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	PTPN22	Q9Y2R2	807 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	SALL1	Q9NSC2	1324 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	MYH2	Q9UKX2	1941 aa		12.84	□□□□□ -0.35
UBE3A-223	ENST00000631247	KIF22	Q14807	665 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	PRPF38B	Q5VTL8	546 aa	Known RBP	12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	CCDC102B	Q68D86	513 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	CDC42EP5	Q6NZY7	148 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	SLF2	Q8IX21	1173 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	FAM43A	Q8N2R8	423 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	ARHGAP45	Q92619	1136 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	FRAT1	Q92837	279 aa	Predicted RBP	12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	ZCCHC17	Q9NP64	241 aa	Known RBP	12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	COPRS	Q9NQ92	184 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	ABCF2	Q9UG63	623 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	AKAP2	Q9Y2D5	859 aa		12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.83	□□□□□ -0.36
UBE3A-223	ENST00000631247	IRF6	O14896	467 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	SLC34A2	O95436	690 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	ADORA1	P30542	326 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	INPP5B	P32019	993 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	PPAT	Q06203	517 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	NFIA	Q12857	509 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	MVP	Q14764	893 aa	Known RBP	12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	GORAB	Q5T7V8	394 aa		12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	12.82	□□□□□ -0.36
UBE3A-223	ENST00000631247		A0A1B0GUL7	405 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	TIMM10	P62072	90 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	RASGRF1	Q13972	1273 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	SLC9C1	Q4G0N8	1177 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	SPTY2D1	Q68D10	685 aa	Predicted RBP	12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	NBPF11	Q86T75	865 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	NEUROD6	Q96NK8	337 aa		12.81	□□□□□ -0.36
UBE3A-223	ENST00000631247	BTBD19	C9JJ37	291 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	TLR2	O60603	784 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	GNAI2	P04899	355 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	RGS3	P49796	1198 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	TFCP2	Q12800	502 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	ARMC5	Q96C12	935 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	XAGE2	Q96GT9	111 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	PICK1	Q9NRD5	415 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	FAM198A	Q9UFP1	575 aa		12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	PDS5A	Q29RF7	1337 aa	Known RBP	12.8	□□□□□ -0.36
UBE3A-223	ENST00000631247	ZSWIM8	A7E2V4	1837 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	PICALM	Q13492	652 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	MTX1	Q13505	466 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	ATF7IP	Q6VMQ6	1270 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	ERICH6	Q7L0X2	663 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	GAK	O14976	1311 aa		12.79	□□□□□ -0.36
UBE3A-223	ENST00000631247	DOCK1	Q14185	1865 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	PDHX	O00330	501 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	ENTPD3	O75355	529 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	TRIM27	P14373	513 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	BTD	P43251	543 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	LACTB	P83111	547 aa	Predicted RBP	12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	NOL9	Q5SY16	702 aa	Known RBP	12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	ANKRD23	Q86SG2	305 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	CLUAP1	Q96AJ1	413 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	ZNF112	Q9UJU3	913 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	PTCH2	Q9Y6C5	1203 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	MROH7-TTC4	A0A0A0MT08	1334 aa		12.78	□□□□□ -0.36
UBE3A-223	ENST00000631247	BCAR3	O75815	825 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	GNRH1	P01148	92 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	GSTO1	P78417	241 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	OS9	Q13438	667 aa	Predicted RBP	12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	SLC4A8	Q2Y0W8	1093 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	ZFPM1	Q8IX07	1006 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	SCYL3	Q8IZE3	742 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	ZNF333	Q96JL9	665 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	PARK7	Q99497	189 aa	Known RBP	12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	IDI2	Q9BXS1	227 aa		12.77	□□□□□ -0.37
UBE3A-223	ENST00000631247	MAST2	Q6P0Q8	1798 aa		12.76	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms