RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
TARDBP-223ENST00000620632 TEX11Q8IYF3 940 aa13.08□□□□□ -0.32
TARDBP-223ENST00000620632 TGFBRAP1Q8WUH2 860 aa13.08□□□□□ -0.32
TARDBP-223ENST00000620632 ANGEL1Q9UNK9 670 aaKnown RBP13.08□□□□□ -0.32
TARDBP-223ENST00000620632 FAM155AB1AL88 458 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-223ENST00000620632 BAG3O95817 575 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 NF2P35240 595 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 FKBP1BP68106 108 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 TTLL12Q14166 644 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-223ENST00000620632 SUPT20HL1Q3ZLR7 823 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 LDLRAD1Q5T700 205 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 SKAP1Q86WV1 359 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 LCORLQ8N3X6 602 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 HHIPL1Q96JK4 782 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 NOL10Q9BSC4 688 aaKnown RBP13.07□□□□□ -0.32
TARDBP-223ENST00000620632 OSBPL5Q9H0X9 879 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-223ENST00000620632 OSBPL3Q9H4L5 887 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 COL2A1P02458 1487 aaPredicted RBP13.07□□□□□ -0.32
TARDBP-223ENST00000620632 FLT1P17948 1338 aa13.07□□□□□ -0.32
TARDBP-223ENST00000620632 DOCK1Q14185 1865 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 MAGEB6P1A0A0J9YX57 407 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 NPM3O75607 178 aaKnown RBP13.06□□□□□ -0.32
TARDBP-223ENST00000620632 UBE3CQ15386 1083 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 RGMBQ6NW40 437 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 TMED8Q6PL24 325 aaPredicted RBP13.06□□□□□ -0.32
TARDBP-223ENST00000620632 MIGA2Q7L4E1 593 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 MAPKAPK5Q8IW41 473 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 CLMNQ96JQ2 1002 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 CAPNS2Q96L46 248 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 ZIC5Q96T25 663 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.06□□□□□ -0.322e-12■□□□□ 8.7
TARDBP-223ENST00000620632 PUS7LQ9H0K6 701 aaKnown RBP13.06□□□□□ -0.32
TARDBP-223ENST00000620632 ARMT1Q9H993 441 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 WDR33Q9C0J8 1336 aaKnown RBP13.06□□□□□ -0.32
TARDBP-223ENST00000620632 PHIPQ8WWQ0 1821 aa13.06□□□□□ -0.32
TARDBP-223ENST00000620632 FAM196BA6NMK8 535 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 PPP1R12BO60237 982 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-223ENST00000620632 AOC2O75106 756 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 MBD4O95243 580 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 PLCG2P16885 1265 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 GRM1Q13255 1194 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
TARDBP-223ENST00000620632 ARMC9Q7Z3E5 817 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 RASAL3Q86YV0 1011 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.323e-13■□□□□ 8.3
TARDBP-223ENST00000620632 OSBP2Q969R2 916 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 CSRNP1Q96S65 589 aa13.05□□□□□ -0.32
TARDBP-223ENST00000620632 MYH8P13535 1937 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 M0R2C6 588 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 RNF113AO15541 343 aaKnown RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 PRKAB2O43741 272 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 NEFLP07196 543 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 SLC10A3P09131 477 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 ZNF157P51786 506 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 EVX2Q03828 476 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 SLC4A8Q2Y0W8 1093 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 JMYQ8N9B5 988 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 SDR42E1Q8WUS8 393 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 SEC62Q99442 399 aaKnown RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
TARDBP-223ENST00000620632 SAP30BPQ9UHR5 308 aaKnown RBP13.04□□□□□ -0.32
TARDBP-223ENST00000620632 GSPT1P15170 499 aaKnown RBP13.03□□□□□ -0.32
TARDBP-223ENST00000620632 INPP5BP32019 993 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 GJA5P36382 358 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 MAP3K10Q02779 954 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 CENPQQ7L2Z9 268 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-223ENST00000620632 CNKSR2Q8WXI2 1034 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 APPBP2Q92624 585 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 ZKSCAN4Q969J2 545 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-223ENST00000620632 EVI5LQ96CN4 794 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 WRNIP1Q96S55 665 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.03□□□□□ -0.32
TARDBP-223ENST00000620632 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 PTPRFP10586 1907 aa13.03□□□□□ -0.32
TARDBP-223ENST00000620632 PHF20L1A8MW92 1017 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 SMIM22K7EJ46 135 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 ECE1P42892 770 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 USP5P45974 858 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 IREB2P48200 963 aaKnown RBP13.02□□□□□ -0.33
TARDBP-223ENST00000620632 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
TARDBP-223ENST00000620632 VGLL4Q14135 290 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
TARDBP-223ENST00000620632 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 CERS3Q8IU89 383 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 ZNF341Q9BYN7 854 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 ZNF112Q9UJU3 913 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 SNCAIPQ9Y6H5 919 aa13.02□□□□□ -0.33
TARDBP-223ENST00000620632 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 GPAA1O43292 621 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 ZFYP08048 801 aaPredicted RBP13.01□□□□□ -0.33
TARDBP-223ENST00000620632 MAP3K9P80192 1104 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 ZMYM1Q5SVZ6 1142 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 TTC22Q5TAA0 569 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 DCAF15Q66K64 600 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
TARDBP-223ENST00000620632 RILPL2Q969X0 211 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms