RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 GNAI2P04899 355 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 BTDP43251 543 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 MVPQ14764 893 aaKnown RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 SPTY2D1Q68D10 685 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 C17orf99Q6UX52 265 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 ZSCAN29Q8IWY8 852 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 ZNF384Q8TF68 577 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 FAM163AQ96GL9 167 aaPredicted RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 ZNF333Q96JL9 665 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 DDX4Q9NQI0 724 aaKnown RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 HMG20BQ9P0W2 317 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 PDS5AQ29RF7 1337 aaKnown RBP13.8□□□□□ -0.2
TARDBP-221ENST00000619555 ATRNL1Q5VV63 1379 aa13.8□□□□□ -0.2
TARDBP-221ENST00000619555 DDTLA6NHG4 134 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-221ENST00000619555 MYCP01106 439 aaPredicted RBP13.79□□□□□ -0.2
TARDBP-221ENST00000619555 CTGFP29279 349 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 MECOMQ03112 1051 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
TARDBP-221ENST00000619555 PICALMQ13492 652 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 KIF22Q14807 665 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 SLC9C1Q4G0N8 1177 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 PI16Q6UXB8 463 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 TBC1D9Q6ZT07 1266 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 ERICH6Q7L0X2 663 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 TMEM106CQ9BVX2 250 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 MROH7-TTC4A0A0A0MT08 1334 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 RFX7Q2KHR2 1363 aa13.79□□□□□ -0.2
TARDBP-221ENST00000619555 RBBP6Q7Z6E9 1792 aaKnown RBP13.78□□□□□ -0.2
TARDBP-221ENST00000619555 DOCK2Q92608 1830 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 GPR75-ASB3A0A0A6YYF3 556 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 CXCL11O14625 94 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 RHBDL3P58872 404 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 GPAT2Q6NUI2 795 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 NBPF11Q86T75 865 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 SCYL3Q8IZE3 742 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 TMEM57Q8N5G2 664 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 SH3TC2Q8TF17 1288 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 ZHX2Q9Y6X8 837 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 ADGRA2Q96PE1 1338 aa13.78□□□□□ -0.2
TARDBP-221ENST00000619555 PTPRAP18433 802 aa13.77□□□□□ -0.21
TARDBP-221ENST00000619555 PSMC4P43686 418 aa13.77□□□□□ -0.21
TARDBP-221ENST00000619555 MAP3K10Q02779 954 aa13.77□□□□□ -0.21
TARDBP-221ENST00000619555 SPATA5Q8NB90 893 aa13.77□□□□□ -0.21
TARDBP-221ENST00000619555 PICK1Q9NRD5 415 aa13.77□□□□□ -0.21
TARDBP-221ENST00000619555 CYP2C8P10632 490 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 ARID4AP29374 1257 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-221ENST00000619555 SLC4A8Q2Y0W8 1093 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 ZKSCAN2Q63HK3 967 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 NSUN4Q96CB9 384 aaKnown RBP13.76□□□□□ -0.21
TARDBP-221ENST00000619555 TRIM47Q96LD4 638 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 RAI14Q9P0K7 980 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.76□□□□□ -0.21
TARDBP-221ENST00000619555 AFG3L2Q9Y4W6 797 aa13.76□□□□□ -0.21
TARDBP-221ENST00000619555 A0A0G2JLL6 359 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-221ENST00000619555 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 FMNL1O95466 1100 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-221ENST00000619555 GNRH1P01148 92 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 LDHCP07864 332 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 OSBPP22059 807 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 MCAMP43121 646 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 PRMT2P55345 433 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 GADL1Q6ZQY3 521 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 PRRT2Q7Z6L0 340 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-221ENST00000619555 CCDC84Q86UT8 332 aaPredicted RBP13.75□□□□□ -0.21
TARDBP-221ENST00000619555 PARK7Q99497 189 aaKnown RBP13.75□□□□□ -0.21
TARDBP-221ENST00000619555 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 SNRKQ9NRH2 765 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 SRRDQ9UH36 339 aa13.75□□□□□ -0.21
TARDBP-221ENST00000619555 CTNND1O60716 968 aaKnown RBP13.74□□□□□ -0.21
TARDBP-221ENST00000619555 UQCRFS1P1P0C7P4 283 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 BCRP11274 1271 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 GSTO1P78417 241 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 ATP8B2P98198 1209 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 POLA2Q14181 598 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 FASTKD5Q7L8L6 764 aaKnown RBP13.74□□□□□ -0.21
TARDBP-221ENST00000619555 YTHDC1Q96MU7 727 aaKnown RBP13.74□□□□□ -0.21
TARDBP-221ENST00000619555 PHIPQ8WWQ0 1821 aa13.74□□□□□ -0.21
TARDBP-221ENST00000619555 PTPRFP10586 1907 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 TRIM75PA6NK02 468 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 TBC1D12O60347 775 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 HOXD10P28358 340 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 MTFR1Q15390 333 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 TNNI3KQ59H18 835 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 DBNDD2Q9BQY9 259 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.73□□□□□ -0.21
TARDBP-221ENST00000619555 LRP2BPQ9P2M1 347 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 FPGT-TNNI3KV9GXZ4 949 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 DOCK1Q14185 1865 aa13.73□□□□□ -0.21
TARDBP-221ENST00000619555 MYPNQ86TC9 1320 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 SURF6O75683 361 aaKnown RBP13.72□□□□□ -0.21
TARDBP-221ENST00000619555 OS9Q13438 667 aaPredicted RBP13.72□□□□□ -0.21
TARDBP-221ENST00000619555 RRP1BQ14684 758 aaKnown RBP13.72□□□□□ -0.21
TARDBP-221ENST00000619555 TTC39AQ5SRH9 613 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 TEX11Q8IYF3 940 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 RAET1EQ8TD07 263 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 SSH3Q8TE77 659 aa13.72□□□□□ -0.21
TARDBP-221ENST00000619555 SH3RF3Q8TEJ3 882 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms