RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 POLA2Q14181 598 aa19.74■□□□□ 0.75
SGMS1-209ENST00000609445 ARHGAP39Q9C0H5 1083 aa19.74■□□□□ 0.75
SGMS1-209ENST00000609445 KCNH4Q9UQ05 1017 aa19.74■□□□□ 0.75
SGMS1-209ENST00000609445 POTEFA5A3E0 1075 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 PHF20L1A8MW92 1017 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 MCAMP43121 646 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 RHBDL3P58872 404 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 ATP8B2P98198 1209 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 ZCCHC17Q9NP64 241 aaKnown RBP19.73■□□□□ 0.75
SGMS1-209ENST00000609445 CENPFP49454 3210 aa19.73■□□□□ 0.75
SGMS1-209ENST00000609445 GPR75-ASB3A0A0A6YYF3 556 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 ECM2O94769 699 aaPredicted RBP19.72■□□□□ 0.75
SGMS1-209ENST00000609445 MOGSQ13724 837 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 DOCK1Q14185 1865 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 ITPRIPQ8IWB1 547 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 FTSJ3Q8IY81 847 aaKnown RBP19.72■□□□□ 0.75
SGMS1-209ENST00000609445 SSH3Q8TE77 659 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 NSUN4Q96CB9 384 aaKnown RBP19.72■□□□□ 0.75
SGMS1-209ENST00000609445 MYO5AQ9Y4I1 1855 aaKnown RBP19.72■□□□□ 0.75
SGMS1-209ENST00000609445 PTCH2Q9Y6C5 1203 aa19.72■□□□□ 0.75
SGMS1-209ENST00000609445 RBBP6Q7Z6E9 1792 aaKnown RBP19.72■□□□□ 0.75
SGMS1-209ENST00000609445 PTPRFP10586 1907 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 PDHXO00330 501 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 OS9Q13438 667 aaPredicted RBP19.71■□□□□ 0.75
SGMS1-209ENST00000609445 TNNI3KQ59H18 835 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 ANKRD23Q86SG2 305 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 ARMC5Q96C12 935 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 DBNDD2Q9BQY9 259 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 SNRKQ9NRH2 765 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 RAI14Q9P0K7 980 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 CPA4Q9UI42 421 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 FPGT-TNNI3KV9GXZ4 949 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 PHIPQ8WWQ0 1821 aa19.71■□□□□ 0.75
SGMS1-209ENST00000609445 UQCRFS1P1P0C7P4 283 aa19.7■□□□□ 0.74
SGMS1-209ENST00000609445 LACTBP83111 547 aaPredicted RBP19.7■□□□□ 0.74
SGMS1-209ENST00000609445 SCYL3Q8IZE3 742 aa19.7■□□□□ 0.74
SGMS1-209ENST00000609445 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.7■□□□□ 0.74
SGMS1-209ENST00000609445 ZBTB7BO15156 539 aaPredicted RBP19.69■□□□□ 0.74
SGMS1-209ENST00000609445 SURF6O75683 361 aaKnown RBP19.69■□□□□ 0.74
SGMS1-209ENST00000609445 LDHCP07864 332 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 GSTO1P78417 241 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 MAP3K10Q02779 954 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 ARHGEF6Q15052 776 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 C17orf99Q6UX52 265 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 GPR108Q9NPR9 543 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 PICK1Q9NRD5 415 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 ZHX2Q9Y6X8 837 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 ADGRA2Q96PE1 1338 aa19.69■□□□□ 0.74
SGMS1-209ENST00000609445 MAST2Q6P0Q8 1798 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 FAM196BA6NMK8 535 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 CXCL11O14625 94 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 PTPRAP18433 802 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 CTGFP29279 349 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 KIF22Q14807 665 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 TTC39AQ5SRH9 613 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 GPAT2Q6NUI2 795 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 CCDC84Q86UT8 332 aaPredicted RBP19.68■□□□□ 0.74
SGMS1-209ENST00000609445 LRP2BPQ9P2M1 347 aa19.68■□□□□ 0.74
SGMS1-209ENST00000609445 SLC9C1Q4G0N8 1177 aa19.67■□□□□ 0.74
SGMS1-209ENST00000609445 ZNF333Q96JL9 665 aa19.67■□□□□ 0.74
SGMS1-209ENST00000609445 ZBED9Q6R2W3 1325 aa19.67■□□□□ 0.74
SGMS1-209ENST00000609445 CDK5RAP2Q96SN8 1893 aa19.67■□□□□ 0.74
SGMS1-209ENST00000609445 CYP2C8P10632 490 aa19.66■□□□□ 0.74
SGMS1-209ENST00000609445 EN2P19622 333 aaPredicted RBP19.66■□□□□ 0.74
SGMS1-209ENST00000609445 GADL1Q6ZQY3 521 aa19.66■□□□□ 0.74
SGMS1-209ENST00000609445 TEX11Q8IYF3 940 aa19.66■□□□□ 0.74
SGMS1-209ENST00000609445 TLR7Q9NYK1 1049 aaKnown RBP19.66■□□□□ 0.74
SGMS1-209ENST00000609445 NOP58Q9Y2X3 529 aaKnown RBP19.66■□□□□ 0.74
SGMS1-209ENST00000609445 AFG3L2Q9Y4W6 797 aa19.66■□□□□ 0.74
SGMS1-209ENST00000609445 ATAD5Q96QE3 1844 aa19.66■□□□□ 0.74
SGMS1-209ENST00000609445 A0A0G2JLL6 359 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 CTNND1O60716 968 aaKnown RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 NPM3O75607 178 aaKnown RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 MYCP01106 439 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 CCDC158Q5M9N0 1113 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 PRPF38BQ5VTL8 546 aaKnown RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 PRRT2Q7Z6L0 340 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 PANK1Q8TE04 598 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 SH3RF3Q8TEJ3 882 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 SH3TC2Q8TF17 1288 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 TRIM47Q96LD4 638 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 OSBPL5Q9H0X9 879 aaPredicted RBP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.65■□□□□ 0.74
SGMS1-209ENST00000609445 SIPA1L1O43166 1804 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 MGAMO43451 1857 aa19.65■□□□□ 0.74
SGMS1-209ENST00000609445 CYP2E1P05181 493 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 ZAP70P43403 619 aa19.64■□□□□ 0.73
SGMS1-209ENST00000609445 PSMC4P43686 418 aa19.64■□□□□ 0.73
SGMS1-209ENST00000609445 NAA16Q6N069 864 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 PARK7Q99497 189 aaKnown RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 CCDC8Q9H0W5 538 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 DBNLQ9UJU6 430 aaKnown RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 COL2A1P02458 1487 aaPredicted RBP19.64■□□□□ 0.73
SGMS1-209ENST00000609445 BRCA2P51587 3418 aa19.63■□□□□ 0.73
SGMS1-209ENST00000609445 TRIM75PA6NK02 468 aa19.63■□□□□ 0.73
SGMS1-209ENST00000609445 TBC1D12O60347 775 aa19.63■□□□□ 0.73
SGMS1-209ENST00000609445 MAP4K4O95819 1239 aaPredicted RBP19.63■□□□□ 0.73
SGMS1-209ENST00000609445 CEP85Q6P2H3 762 aa19.63■□□□□ 0.73
SGMS1-209ENST00000609445 ADGRA1Q86SQ6 560 aa19.63■□□□□ 0.73
SGMS1-209ENST00000609445 NBPF11Q86T75 865 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms