RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 MAST2Q6P0Q8 1798 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 MYO5AQ9Y4I1 1855 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 BAG3O95817 575 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 SLURP2P0DP57 97 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 TM4SF4P48230 202 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 LBX1P52954 281 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 DYNLL1P63167 89 aaKnown RBP15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 MAP3K10Q02779 954 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 MAP3K12Q12852 859 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 DCAF15Q66K64 600 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 TEX11Q8IYF3 940 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 ZKSCAN4Q969J2 545 aaPredicted RBP15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 WRNIP1Q96S55 665 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 HAUS7Q99871 368 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 ZNF341Q9BYN7 854 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 TSKSQ9UJT2 592 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 ZNF112Q9UJU3 913 aa15.57■□□□□ 0.08
SHROOM1-207ENST00000606676 CA12O43570 354 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 ZBTB48P10074 688 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 TMED8Q6PL24 325 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 MIGA1Q8NAN2 632 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 CNKSR2Q8WXI2 1034 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 NOL10Q9BSC4 688 aaKnown RBP15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 OSBPL5Q9H0X9 879 aaPredicted RBP15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 ECHDC1Q9NTX5 307 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 PAG1Q9NWQ8 432 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 SNCAIPQ9Y6H5 919 aa15.56■□□□□ 0.08
SHROOM1-207ENST00000606676 OTOFQ9HC10 1997 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 TCRBV5S4A2TA0A5A2 114 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 PHF20L1A8MW92 1017 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 PDE6AP16499 860 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 PLCG2P16885 1265 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 INPP5BP32019 993 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 SLC9C2Q5TAH2 1124 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 ZSCAN29Q8IWY8 852 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 OTUD7AQ8TE49 926 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 OPTNQ96CV9 577 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 PRDM10Q9NQV6 1147 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 SAGE1Q9NXZ1 904 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 CSADQ9Y600 493 aa15.55■□□□□ 0.08
SHROOM1-207ENST00000606676 DOCK2Q92608 1830 aa15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 COL2A1P02458 1487 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 TRPA1O75762 1119 aa15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 TSHZ3Q63HK5 1081 aa15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 TGFBRAP1Q8WUH2 860 aa15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 MS4A4AQ96JQ5 239 aa15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 RIOK1Q9BRS2 568 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-207ENST00000606676 FLT1P17948 1338 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 ZNF532Q9HCE3 1301 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 SPDYE5A6NIY4 337 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 SREBF2Q12772 1141 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 SLFNL1Q499Z3 407 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 ERO1BQ86YB8 467 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 MAPKAPK5Q8IW41 473 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
SHROOM1-207ENST00000606676 SALL3Q9BXA9 1300 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 TESPA1A2RU30 521 aaPredicted RBP15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 MANSC4A6NHS7 340 aaPredicted RBP15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 TBC1D12O60347 775 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 IGHDP01880 384 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 CHGBP05060 677 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 INHBEP58166 350 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 ANKRD45Q5TZF3 282 aa15.52■□□□□ 0.08
SHROOM1-207ENST00000606676 IGF2BP3O00425 579 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 ADD2P35612 726 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 IRX6P78412 446 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 NOL9Q5SY16 702 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 IFNL1Q8IU54 200 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 CERS3Q8IU89 383 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 SMC5Q8IY18 1101 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 PI4K2BQ8TCG2 481 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 OTUD5Q96G74 571 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 GPATCH3Q96I76 525 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 PTPN18Q99952 460 aa15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 DHX36Q9H2U1 1008 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 RWDD1Q9H446 243 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-207ENST00000606676 TTC41PQ6P2S7 1318 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 MAGEB6P1A0A0J9YX57 407 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 FAM196BA6NMK8 535 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 IRF6O14896 467 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 PPATQ06203 517 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 PPIL2Q13356 520 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 METTL16Q86W50 562 aaKnown RBP15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 BRI3BPQ8WY22 251 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 PI4KBQ9UBF8 816 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 PALD1Q9ULE6 856 aa15.5■□□□□ 0.07
SHROOM1-207ENST00000606676 MX1P20591 662 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 GTF2A2P52657 109 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 RRP1BQ14684 758 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 UBE3CQ15386 1083 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 CFHR5Q9BXR6 569 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 R3HDMLQ9H3Y0 253 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 SAP30BPQ9UHR5 308 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 HERC5Q9UII4 1024 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 LAMB1P07942 1786 aa15.49■□□□□ 0.07
SHROOM1-207ENST00000606676 CTNND1O60716 968 aaKnown RBP15.48■□□□□ 0.07
SHROOM1-207ENST00000606676 TBC1D8O95759 1140 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms