RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SNW1Q13573 536 aaKnown RBP13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 FAM47AQ5JRC9 791 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 NLRP3Q96P20 1036 aa13.35□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZNF202O95125 648 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 ZNF75DP51815 510 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 PPARAQ07869 468 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 DPCR1Q3MIW9 517 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 KCNG4Q8TDN1 519 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 SMARCC1Q92922 1105 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 CDCA7Q9BWT1 371 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 ANO10Q9NW15 660 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 CCNL1Q9UK58 526 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 EP400Q96L91 3159 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 PFKFB1P16118 471 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 LMOD1P29536 600 aaPredicted RBP13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 TRMT1Q9NXH9 659 aaKnown RBP13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 ABCC6O95255 1503 aa13.34□□□□□ -0.27
ARHGEF1-220ENST00000600274 WDHD1O75717 1129 aaPredicted RBP13.33□□□□□ -0.27
ARHGEF1-220ENST00000600274 DIS3L2Q8IYB7 885 aaKnown RBP13.33□□□□□ -0.27
ARHGEF1-220ENST00000600274 RTEL1Q9NZ71 1219 aa13.33□□□□□ -0.27
ARHGEF1-220ENST00000600274 MINPP1Q9UNW1 487 aa13.33□□□□□ -0.27
ARHGEF1-220ENST00000600274 SPATA31A5Q5VU36 1347 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 SPATA31A7Q8IWB4 1347 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 USP17L12C9JPN9 530 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 USP17L21D6R901 530 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 NMT2O60551 498 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 PRDX5P30044 214 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 SYKP43405 635 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 PDE4CQ08493 712 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 KRT23Q9C075 422 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 PLEKHG2Q9H7P9 1386 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 ADALQ6DHV7 355 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 VPS54Q9P1Q0 977 aa13.33□□□□□ -0.28
ARHGEF1-220ENST00000600274 TOM1O60784 492 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 CREBRFQ8IUR6 639 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 TNKSO95271 1327 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 DISP2A7MBM2 1401 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 CYP2D6P10635 497 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 RPS8P62241 208 aaKnown RBP13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 PNOCQ13519 176 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 CCDC144BQ3MJ40 725 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 BRAPQ7Z569 592 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 BBXQ8WY36 941 aaPredicted RBP13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 ZNF654Q8IZM8 581 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 CABP5Q9NP86 173 aa13.32□□□□□ -0.28
ARHGEF1-220ENST00000600274 CTAGE5O15320 804 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 RFC4P35249 363 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 IFIT1BQ5T764 474 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 TXNRD3Q86VQ6 643 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 DZIP1Q86YF9 867 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 FMR1NBQ8N0W7 255 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 CNNM2Q9H8M5 875 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 MROH7-TTC4A0A0A0MT08 1334 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 AMIGO3Q86WK7 504 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 OXER1Q8TDS5 423 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 ESR2Q92731 530 aa13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 FAM84BQ96KN1 310 aaPredicted RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 NAT10Q9H0A0 1025 aaKnown RBP13.31□□□□□ -0.28
ARHGEF1-220ENST00000600274 FAM205CA6NFA0 338 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 GRAMD1CQ8IYS0 662 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 ZNF827Q17R98 1081 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 PPP4R3BQ5MIZ7 849 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 ENGASEQ8NFI3 743 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 RNF41Q9H4P4 317 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 USP21Q9UK80 565 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 FOXN1O15353 648 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 HIBADHP31937 336 aaKnown RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 GRIN1Q05586 938 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 TDRD7Q8NHU6 1098 aaKnown RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 CACTINQ8WUQ7 758 aaKnown RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 MAP7D2Q96T17 732 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 FAM217BQ9NTX9 383 aaPredicted RBP13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 MCM9Q9NXL9 1143 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 IFNKQ9P0W0 207 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 KIAA1468Q9P260 1216 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 ABCC12Q96J65 1359 aa13.3□□□□□ -0.28
ARHGEF1-220ENST00000600274 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 JMYQ8N9B5 988 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 ZNF512BQ96KM6 892 aaPredicted RBP13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 THRAP3Q9Y2W1 955 aaKnown RBP13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 YEATS4O95619 227 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 GNAT2P19087 354 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 FANCBQ8NB91 859 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 POLR3EQ9NVU0 708 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 TSPY2A6NKD2 308 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 USP5P45974 858 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 EVCP57679 992 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 MECOMQ03112 1051 aa13.29□□□□□ -0.28
ARHGEF1-220ENST00000600274 DIXDC1Q155Q3 683 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms