RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 GPR75-ASB3A0A0A6YYF3 556 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 POTEFA5A3E0 1075 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 RHBDL3P58872 404 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 NOL9Q5SY16 702 aaKnown RBP20.97■□□□□ 0.95
CCDC9-202ENST00000595659 NSUN4Q96CB9 384 aaKnown RBP20.97■□□□□ 0.95
CCDC9-202ENST00000595659 DBNDD2Q9BQY9 259 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 CPA4Q9UI42 421 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 KCNH4Q9UQ05 1017 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 ZHX2Q9Y6X8 837 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 RFX7Q2KHR2 1363 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 ATRNL1Q5VV63 1379 aa20.97■□□□□ 0.95
CCDC9-202ENST00000595659 PDHXO00330 501 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 ZBTB7BO15156 539 aaPredicted RBP20.96■□□□□ 0.95
CCDC9-202ENST00000595659 UQCRFS1P1P0C7P4 283 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 TNNI3KQ59H18 835 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 TTC39AQ5SRH9 613 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 LRP2BPQ9P2M1 347 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.96■□□□□ 0.95
CCDC9-202ENST00000595659 PTCH2Q9Y6C5 1203 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 FPGT-TNNI3KV9GXZ4 949 aa20.96■□□□□ 0.95
CCDC9-202ENST00000595659 FAM196BA6NMK8 535 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 MYCP01106 439 aaPredicted RBP20.95■□□□□ 0.94
CCDC9-202ENST00000595659 LDHCP07864 332 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 GSTO1P78417 241 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 MOGSQ13724 837 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 ANKRD23Q86SG2 305 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 CCDC84Q86UT8 332 aaPredicted RBP20.95■□□□□ 0.94
CCDC9-202ENST00000595659 SCYL3Q8IZE3 742 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 ZCCHC17Q9NP64 241 aaKnown RBP20.95■□□□□ 0.94
CCDC9-202ENST00000595659 PICK1Q9NRD5 415 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 MYH13Q9UKX3 1938 aa20.95■□□□□ 0.94
CCDC9-202ENST00000595659 TNRC18O15417 2968 aaPredicted RBP20.95■□□□□ 0.94
CCDC9-202ENST00000595659 LACTBP83111 547 aaPredicted RBP20.94■□□□□ 0.94
CCDC9-202ENST00000595659 ARHGEF6Q15052 776 aa20.94■□□□□ 0.94
CCDC9-202ENST00000595659 PANK1Q8TE04 598 aa20.94■□□□□ 0.94
CCDC9-202ENST00000595659 LAMB1P07942 1786 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 HTTP42858 3142 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 PTPRAP18433 802 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 MAP3K10Q02779 954 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 KIF22Q14807 665 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 CCDC158Q5M9N0 1113 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 GPAT2Q6NUI2 795 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 C17orf99Q6UX52 265 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 ARMC5Q96C12 935 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 CCDC8Q9H0W5 538 aaPredicted RBP20.93■□□□□ 0.94
CCDC9-202ENST00000595659 GPR108Q9NPR9 543 aa20.93■□□□□ 0.94
CCDC9-202ENST00000595659 CXCL11O14625 94 aa20.92■□□□□ 0.94
CCDC9-202ENST00000595659 TLR7Q9NYK1 1049 aaKnown RBP20.92■□□□□ 0.94
CCDC9-202ENST00000595659 CYP2C8P10632 490 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 CTGFP29279 349 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 SLC9C1Q4G0N8 1177 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 NAA16Q6N069 864 aaPredicted RBP20.91■□□□□ 0.94
CCDC9-202ENST00000595659 ZBED9Q6R2W3 1325 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 GADL1Q6ZQY3 521 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 TEX11Q8IYF3 940 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 SH3RF3Q8TEJ3 882 aaPredicted RBP20.91■□□□□ 0.94
CCDC9-202ENST00000595659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.91■□□□□ 0.94
CCDC9-202ENST00000595659 AFG3L2Q9Y4W6 797 aa20.91■□□□□ 0.94
CCDC9-202ENST00000595659 TRIM75PA6NK02 468 aa20.9■□□□□ 0.94
CCDC9-202ENST00000595659 CTNND1O60716 968 aaKnown RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 CYP2E1P05181 493 aaPredicted RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 EN2P19622 333 aaPredicted RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 ZAP70P43403 619 aa20.9■□□□□ 0.94
CCDC9-202ENST00000595659 SH3TC2Q8TF17 1288 aa20.9■□□□□ 0.94
CCDC9-202ENST00000595659 OSBPL5Q9H0X9 879 aaPredicted RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 AATFQ9NY61 560 aaKnown RBP eCLIP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 DBNLQ9UJU6 430 aaKnown RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 NOP58Q9Y2X3 529 aaKnown RBP20.9■□□□□ 0.94
CCDC9-202ENST00000595659 ADGRA2Q96PE1 1338 aa20.89■□□□□ 0.93
CCDC9-202ENST00000595659 A0A0G2JLL6 359 aaPredicted RBP20.89■□□□□ 0.93
CCDC9-202ENST00000595659 PSMC4P43686 418 aa20.89■□□□□ 0.93
CCDC9-202ENST00000595659 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
CCDC9-202ENST00000595659 PRRT2Q7Z6L0 340 aaPredicted RBP20.89■□□□□ 0.93
CCDC9-202ENST00000595659 EAF2Q96CJ1 260 aaPredicted RBP20.89■□□□□ 0.93
CCDC9-202ENST00000595659 ZNF333Q96JL9 665 aa20.89■□□□□ 0.93
CCDC9-202ENST00000595659 NOL10Q9BSC4 688 aaKnown RBP20.89■□□□□ 0.93
CCDC9-202ENST00000595659 PIH1D3Q9NQM4 214 aaKnown RBP20.89■□□□□ 0.93
CCDC9-202ENST00000595659 MYH2Q9UKX2 1941 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 FMNL1O95466 1100 aaPredicted RBP20.88■□□□□ 0.93
CCDC9-202ENST00000595659 RRP1BQ14684 758 aaKnown RBP20.88■□□□□ 0.93
CCDC9-202ENST00000595659 FASTKD5Q7L8L6 764 aaKnown RBP20.88■□□□□ 0.93
CCDC9-202ENST00000595659 ADGRA1Q86SQ6 560 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 NBPF11Q86T75 865 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 TRIM47Q96LD4 638 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 PARK7Q99497 189 aaKnown RBP20.88■□□□□ 0.93
CCDC9-202ENST00000595659 EXOC6BQ9Y2D4 811 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 NDUFB9Q9Y6M9 179 aa20.88■□□□□ 0.93
CCDC9-202ENST00000595659 TBC1D12O60347 775 aa20.87■□□□□ 0.93
CCDC9-202ENST00000595659 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
CCDC9-202ENST00000595659 TMEM106CQ9BVX2 250 aa20.87■□□□□ 0.93
CCDC9-202ENST00000595659 MAP4K4O95819 1239 aaPredicted RBP20.86■□□□□ 0.93
CCDC9-202ENST00000595659 SLC4A8Q2Y0W8 1093 aa20.86■□□□□ 0.93
CCDC9-202ENST00000595659 MAPKAPK5Q8IW41 473 aa20.86■□□□□ 0.93
CCDC9-202ENST00000595659 TGFBRAP1Q8WUH2 860 aa20.86■□□□□ 0.93
CCDC9-202ENST00000595659 BCL11AQ9H165 835 aa20.86■□□□□ 0.93
CCDC9-202ENST00000595659 AK9Q5TCS8 1911 aa20.86■□□□□ 0.93
CCDC9-202ENST00000595659 BAG3O95817 575 aa20.85■□□□□ 0.93
CCDC9-202ENST00000595659 OSBPP22059 807 aa20.85■□□□□ 0.93
CCDC9-202ENST00000595659 PRPF38BQ5VTL8 546 aaKnown RBP20.85■□□□□ 0.93
CCDC9-202ENST00000595659 BCRP11274 1271 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms