RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 MYCP01106 439 aaPredicted RBP13.26□□□□□ -0.29
USE1-203ENST00000593597 RHBDL3P58872 404 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 SLC9C1Q4G0N8 1177 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 CCDC84Q86UT8 332 aaPredicted RBP13.26□□□□□ -0.29
USE1-203ENST00000593597 XAGE2Q96GT9 111 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 ALPK3Q96L96 1907 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 SZT2Q5T011 3432 aa13.26□□□□□ -0.29
USE1-203ENST00000593597 MROH7-TTC4A0A0A0MT08 1334 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 SRGAP3O43295 1099 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 BCRP11274 1271 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 TRIM27P14373 513 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 OSBPP22059 807 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 MAP3K10Q02779 954 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 MTFR1Q15390 333 aa13.25□□□□□ -0.29
USE1-203ENST00000593597 FAM163AQ96GL9 167 aaPredicted RBP13.25□□□□□ -0.29
USE1-203ENST00000593597 GNL3LQ9NVN8 582 aaKnown RBP13.25□□□□□ -0.29
USE1-203ENST00000593597 ENTPD3O75355 529 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 BCAR3O75815 825 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 CYP2C8P10632 490 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 PTPRAP18433 802 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 BTDP43251 543 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 SCYL3Q8IZE3 742 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 ARHGAP45Q92619 1136 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 HMG20BQ9P0W2 317 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 ABCF2Q9UG63 623 aa13.24□□□□□ -0.29
USE1-203ENST00000593597 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 FAM196BA6NMK8 535 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 PSMC4P43686 418 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 MECOMQ03112 1051 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 PICALMQ13492 652 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 RRP1BQ14684 758 aaKnown RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 HABP4Q5JVS0 413 aaKnown RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 SRRDQ9UH36 339 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 AFG3L2Q9Y4W6 797 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 TRIOBPQ9H2D6 2365 aa13.23□□□□□ -0.29
USE1-203ENST00000593597 COL2A1P02458 1487 aaPredicted RBP13.23□□□□□ -0.29
USE1-203ENST00000593597 GPR75-ASB3A0A0A6YYF3 556 aa13.22□□□□□ -0.29
USE1-203ENST00000593597 CCER2I3L3R5 266 aa13.22□□□□□ -0.29
USE1-203ENST00000593597 CXCL11O14625 94 aa13.22□□□□□ -0.29
USE1-203ENST00000593597 TBC1D9Q6ZT07 1266 aa13.22□□□□□ -0.29
USE1-203ENST00000593597 GABRQQ9UN88 632 aa13.22□□□□□ -0.29
USE1-203ENST00000593597 MYPNQ86TC9 1320 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 GNAI3P08754 354 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 ARID4AP29374 1257 aaPredicted RBP13.21□□□□□ -0.29
USE1-203ENST00000593597 MCAMP43121 646 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 PRKCZQ05513 592 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 KIF22Q14807 665 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 SLC4A8Q2Y0W8 1093 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 ATF7IPQ6VMQ6 1270 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 ZGPATQ8N5A5 531 aaKnown RBP13.21□□□□□ -0.29
USE1-203ENST00000593597 NSUN4Q96CB9 384 aaKnown RBP13.21□□□□□ -0.29
USE1-203ENST00000593597 TMEM106CQ9BVX2 250 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 PCDH10Q9P2E7 1040 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 ZHX2Q9Y6X8 837 aa13.21□□□□□ -0.29
USE1-203ENST00000593597 DDX60LQ5H9U9 1706 aaKnown RBP13.2□□□□□ -0.3
USE1-203ENST00000593597 MYH1P12882 1939 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 GNRH1P01148 92 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 PRMT2P55345 433 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 MVPQ14764 893 aaKnown RBP13.2□□□□□ -0.3
USE1-203ENST00000593597 ARHGEF6Q15052 776 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 UBE2Q1Q7Z7E8 422 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 NBPF11Q86T75 865 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
USE1-203ENST00000593597 PARK7Q99497 189 aaKnown RBP13.2□□□□□ -0.3
USE1-203ENST00000593597 FMNL1O95466 1100 aaPredicted RBP13.19□□□□□ -0.3
USE1-203ENST00000593597 TREML2Q5T2D2 321 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 GADL1Q6ZQY3 521 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 ERICH6Q7L0X2 663 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 ADGRA1Q86SQ6 560 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 ZSCAN29Q8IWY8 852 aaPredicted RBP13.19□□□□□ -0.3
USE1-203ENST00000593597 TMEM57Q8N5G2 664 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 SPATA5Q8NB90 893 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 NEUROD6Q96NK8 337 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 HDAC5Q9UQL6 1122 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 AKAP2Q9Y2D5 859 aa13.19□□□□□ -0.3
USE1-203ENST00000593597 TRIM75PA6NK02 468 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 CTNND1O60716 968 aaKnown RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 GNAI2P04899 355 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 GRK4P32298 578 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
USE1-203ENST00000593597 JAG1P78504 1218 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 POLA2Q14181 598 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 SHROOM1Q2M3G4 852 aaPredicted RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 FRAT1Q92837 279 aaPredicted RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 GCC1Q96CN9 775 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 OSBPL5Q9H0X9 879 aaPredicted RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 PICK1Q9NRD5 415 aa13.18□□□□□ -0.3
USE1-203ENST00000593597 COLQQ9Y215 455 aaPredicted RBP13.18□□□□□ -0.3
USE1-203ENST00000593597 H0YGN5 161 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 TBC1D12O60347 775 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 CCL5P13501 91 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 SPTY2D1Q68D10 685 aaPredicted RBP13.17□□□□□ -0.3
USE1-203ENST00000593597 RAET1EQ8TD07 263 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 SH3RF3Q8TEJ3 882 aaPredicted RBP13.17□□□□□ -0.3
USE1-203ENST00000593597 DBNDD2Q9BQY9 259 aa13.17□□□□□ -0.3
USE1-203ENST00000593597 C1orf115Q9H7X2 142 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms